Cp4.1LG08g00090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGGCATCTCCCAAATAAATATGCAACTCCCTTCTAATGCTTTAATCACCCTTCTTTCTACTTTCGGCTGCTTTACCAACCTCCAATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGACGGAGATATGCTGCGTACGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACTCATCTCAACTGTTTGAAGGTGAGTTTACTTATTTGTATTCATGATAAAATTAGTAGTCATTTGTTCTATGTGTGTGTTCAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTGGCTATGGATTTGATGGAACACCGAGAAAACGAGATCAGATGCTTGAACACGCTTAACCAATCGGAGCTAGATCGCTTCATGGTATGGTATTAACTACATATCATTCGGAATTCGAACTTTATAATAAGTATCATCACGTTTGAATCATTGGATGTCGAAAGATTAATAAACCGTTCAAAATAATTACATGTCATATACAAGTGCATTGTTGACACATGACTTAATCTTTGTACGATTTATTAGTCGTGAAACATTTTTAGGGAAAGTTACCAATCGTAGAGCATTTCTAAGAGAAGAATTGTTGAGTCGTCTGTCCTAAGTTTTATTTCAAAAGTCGAAAAGAATTGTGATTAAAGTATTTTTAGTACAAAGTGTCGAGGATTGTTGGGGAGTAGTCCCACATGGGGCTAATTTAGGGAATAATTATGGGTTTATAAGTAAGAAATACATTTTCATTGGTACGAGACCATTTGAGGGAAGCCCAAAACGAAGCCACGAGAGCTGTGTGCTCAAAGTGGACAAAAATGATATGGTGTGTTGAAACTGAAGGAGTTATGTGTGCAGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCGGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA TGGGCATCTCCCAAATAAATATGCAACTCCCTTCTAATGCTTTAATCACCCTTCTTTCTACTTTCGGCTGCTTTACCAACCTCCAATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGACGGAGATATGCTGCGTACGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACTCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCGGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA ATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGACGGAGATATGCTGCGTACGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACTCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCGGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA MDSGNHSTDQPLRVQLQLKHEEEDDGVDGDMLRTRISSHPLYGLLLETHLNCLKVGGIGELDRAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK Homology
BLAST of Cp4.1LG08g00090 vs. ExPASy Swiss-Prot
Match: F4HXU3 (Protein KNATM OS=Arabidopsis thaliana OX=3702 GN=KNATM PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 7.2e-05 Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. NCBI nr
Match: XP_023539616.1 (homeobox protein KNOX3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189 bits (479), Expect = 2.84e-59 Identity = 109/151 (72.19%), Postives = 109/151 (72.19%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. NCBI nr
Match: KAG7028461.1 (Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185 bits (469), Expect = 9.47e-58 Identity = 107/151 (70.86%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. NCBI nr
Match: KAG6596993.1 (Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (467), Expect = 1.91e-57 Identity = 107/151 (70.86%), Postives = 107/151 (70.86%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. NCBI nr
Match: XP_022945492.1 (homeobox protein KNOX3 [Cucurbita moschata]) HSP 1 Score: 182 bits (462), Expect = 1.10e-56 Identity = 106/151 (70.20%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. NCBI nr
Match: XP_022974318.1 (homeobox protein KNOX3-like [Cucurbita maxima] >XP_022975290.1 homeobox protein KNOX3-like [Cucurbita maxima]) HSP 1 Score: 163 bits (412), Expect = 4.11e-49 Identity = 101/152 (66.45%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. ExPASy TrEMBL
Match: A0A6J1G133 (homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1) HSP 1 Score: 182 bits (462), Expect = 5.34e-57 Identity = 106/151 (70.20%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. ExPASy TrEMBL
Match: A0A6J1IFV6 (homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=1) HSP 1 Score: 163 bits (412), Expect = 1.99e-49 Identity = 101/152 (66.45%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. ExPASy TrEMBL
Match: A0A6J1C8K6 (protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1) HSP 1 Score: 109 bits (272), Expect = 3.38e-28 Identity = 66/130 (50.77%), Postives = 78/130 (60.00%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. ExPASy TrEMBL
Match: A0A444Z1E2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g075536 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.05e-17 Identity = 53/130 (40.77%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. ExPASy TrEMBL
Match: A0A6P4DE57 (homeobox protein knotted-1-like 1 OS=Arachis duranensis OX=130453 GN=LOC107490543 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.05e-17 Identity = 53/130 (40.77%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. TAIR 10
Match: AT1G14760.3 (KNOX Arabidopsis thaliana meinox ) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08 Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. TAIR 10
Match: AT1G14760.1 (KNOX Arabidopsis thaliana meinox ) HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06 Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. TAIR 10
Match: AT1G14760.2 (KNOX Arabidopsis thaliana meinox ) HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06 Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of Cp4.1LG08g00090 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 ) HSP 1 Score: 42.0 bits (97), Expect = 3.7e-04 Identity = 21/72 (29.17%), Postives = 41/72 (56.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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