Cp4.1LG07g10640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g10640
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG07: 9457936 .. 9458424 (+)
RNA-Seq ExpressionCp4.1LG07g10640
SyntenyCp4.1LG07g10640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATGGATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGACCGATGGCGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAATGAAGAGAGTTGCGGTTCATCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGACATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCGTATCGGAGGGATCCAGTTGGGATGAGGATGATTTAGCGAGGTTCATCGGCGACGAGGAACAGATTTTCTGA

mRNA sequence

ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATGGATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGACCGATGGCGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAATGAAGAGAGTTGCGGTTCATCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGACATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCGTATCGGAGGGATCCAGTTGGGATGAGGATGATTTAGCGAGGTTCATCGGCGACGAGGAACAGATTTTCTGA

Coding sequence (CDS)

ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATGGATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGACCGATGGCGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAATGAAGAGAGTTGCGGTTCATCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGACATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCGTATCGGAGGGATCCAGTTGGGATGAGGATGATTTAGCGAGGTTCATCGGCGACGAGGAACAGATTTTCTGA

Protein sequence

MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF
Homology
BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match: XP_023538157.1 (uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311 bits (796), Expect = 1.71e-106
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162

BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match: KAG6586479.1 (hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021338.1 hypothetical protein SDJN02_18027, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309 bits (791), Expect = 9.92e-106
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           IDSATVEKWKLWKSEE SS+SEGSSWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKSEEVSSISEGSSWDEDDLARFIGDEEQIF 162

BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match: XP_022938092.1 (uncharacterized protein LOC111444281 [Cucurbita moschata])

HSP 1 Score: 308 bits (790), Expect = 1.41e-105
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           IDSATVEKWKLWKSEEASS+SEGSSWDEDDLARFIGDEE IF
Sbjct: 121 IDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF 162

BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match: XP_022965986.1 (uncharacterized protein LOC111465706 [Cucurbita maxima])

HSP 1 Score: 307 bits (787), Expect = 4.04e-105
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           IDSATVEKWKLWK+EEASSVSEG SWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKTEEASSVSEGFSWDEDDLARFIGDEEQIF 162

BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match: XP_038890889.1 (uncharacterized protein LOC120080324 [Benincasa hispida])

HSP 1 Score: 255 bits (652), Expect = 1.94e-84
Identity = 136/169 (80.47%), Postives = 147/169 (86.98%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAA-VEDVGNDILAWISVEEETVGELMMLLDDAEKSR 60
           M+E+RKRH+FVP E ST+KRPR A    EDV +DILAWISVEEETVGELMMLLDD EKSR
Sbjct: 1   MDESRKRHEFVPPEASTEKRPRVAVKEAEDVDDDILAWISVEEETVGELMMLLDDVEKSR 60

Query: 61  PMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLM 120
           PM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIKLM
Sbjct: 61  PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120

Query: 121 EIDSATVEKWKLW------KSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           EIDS TVEKWKLW      + EE S+V +G  WDEDDLARFIGDEEQIF
Sbjct: 121 EIDSETVEKWKLWSEDRLKEEEETSAVLDGFCWDEDDLARFIGDEEQIF 169

BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match: A0A6J1FD19 (uncharacterized protein LOC111444281 OS=Cucurbita moschata OX=3662 GN=LOC111444281 PE=4 SV=1)

HSP 1 Score: 308 bits (790), Expect = 6.82e-106
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           IDSATVEKWKLWKSEEASS+SEGSSWDEDDLARFIGDEE IF
Sbjct: 121 IDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF 162

BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match: A0A6J1HN50 (uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.96e-105
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120

Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
           IDSATVEKWKLWK+EEASSVSEG SWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKTEEASSVSEGFSWDEDDLARFIGDEEQIF 162

BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match: A0A5A7UZZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00520 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEE+R  H+FV  E ST+KR R AA  ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           + EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61  VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120

Query: 121 IDSATVEKWKLW---------KSEEASSVSEGS-SWDEDDLARFIGDEEQI 161
           IDS TVEKWK+W         + EE S V +G  SWDEDDLARF+GDEEQI
Sbjct: 121 IDSETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169

BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match: A0A5D3CG58 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00940 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEE+R  H+FV  E ST+KR R AA  ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           + EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61  VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120

Query: 121 IDSATVEKWKLW---------KSEEASSVSEGS-SWDEDDLARFIGDEEQI 161
           IDS TVEKWK+W         + EE S V +G  SWDEDDLARF+GDEEQI
Sbjct: 121 IDSETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169

BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match: A0A1S3CB71 (uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEE+R  H+FV  E ST+KR R AA  ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1   MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60

Query: 61  MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
           + EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61  VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120

Query: 121 IDSATVEKWKLW---------KSEEASSVSEGS-SWDEDDLARFIGDEEQI 161
           IDS TVEKWK+W         + EE S V +G  SWDEDDLARF+GDEEQI
Sbjct: 121 IDSETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169

BLAST of Cp4.1LG07g10640 vs. TAIR 10
Match: AT5G56880.1 (unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 8.9e-15
Identity = 61/170 (35.88%), Postives = 88/170 (51.76%), Query Frame = 0

Query: 1   MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
           MEE R + D    +N+T K       +   G         +E T  E+M L++ +  +  
Sbjct: 1   MEEMRNKVD-ENGKNTTAKEVTKKTTMLVAG-------EYDEYTPDEIMSLVESSSPTMT 60

Query: 61  MAE------------KVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMAS 120
             E            +V+FIDDPY+  ++ QSSS ++TIN NEESCG SFS+SDSSVMAS
Sbjct: 61  TTEIEGTNFSGEGSFRVRFIDDPYAMPVVVQSSSGYITINVNEESCGPSFSDSDSSVMAS 120

Query: 121 VDMNGARIKLMEIDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDE 159
           VD +G      E  +   EK   W + E    +    W++D LARF+G++
Sbjct: 121 VDASGLFGCCFEYGN---EKGGAWSTNEVR--ASEYEWNDDMLARFLGED 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023538157.11.71e-106100.00uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo][more]
KAG6586479.19.92e-10698.77hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022938092.11.41e-10598.77uncharacterized protein LOC111444281 [Cucurbita moschata][more]
XP_022965986.14.04e-10598.77uncharacterized protein LOC111465706 [Cucurbita maxima][more]
XP_038890889.11.94e-8480.47uncharacterized protein LOC120080324 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1FD196.82e-10698.77uncharacterized protein LOC111444281 OS=Cucurbita moschata OX=3662 GN=LOC1114442... [more]
A0A6J1HN501.96e-10598.77uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706... [more]
A0A5A7UZZ99.40e-7674.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CG589.40e-7674.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CB719.40e-7674.27uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=... [more]
Match NameE-valueIdentityDescription
AT5G56880.18.9e-1535.88unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacter... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR37265OS01G0195300 PROTEINcoord: 1..159
NoneNo IPR availablePANTHERPTHR37265:SF5BNACNNG68970D PROTEINcoord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g10640.1Cp4.1LG07g10640.1mRNA