Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATGGATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGACCGATGGCGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAATGAAGAGAGTTGCGGTTCATCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGACATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCGTATCGGAGGGATCCAGTTGGGATGAGGATGATTTAGCGAGGTTCATCGGCGACGAGGAACAGATTTTCTGA
mRNA sequence
ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATGGATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGACCGATGGCGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAATGAAGAGAGTTGCGGTTCATCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGACATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCGTATCGGAGGGATCCAGTTGGGATGAGGATGATTTAGCGAGGTTCATCGGCGACGAGGAACAGATTTTCTGA
Coding sequence (CDS)
ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATGGATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGACCGATGGCGGAGAAAGTGAAGTTCATCGACGATCCGTACTCATCGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAATGAAGAGAGTTGCGGTTCATCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGACATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCGTATCGGAGGGATCCAGTTGGGATGAGGATGATTTAGCGAGGTTCATCGGCGACGAGGAACAGATTTTCTGA
Protein sequence
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF
Homology
BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match:
XP_023538157.1 (uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 311 bits (796), Expect = 1.71e-106
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match:
KAG6586479.1 (hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021338.1 hypothetical protein SDJN02_18027, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 309 bits (791), Expect = 9.92e-106
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
IDSATVEKWKLWKSEE SS+SEGSSWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKSEEVSSISEGSSWDEDDLARFIGDEEQIF 162
BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match:
XP_022938092.1 (uncharacterized protein LOC111444281 [Cucurbita moschata])
HSP 1 Score: 308 bits (790), Expect = 1.41e-105
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
IDSATVEKWKLWKSEEASS+SEGSSWDEDDLARFIGDEE IF
Sbjct: 121 IDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF 162
BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match:
XP_022965986.1 (uncharacterized protein LOC111465706 [Cucurbita maxima])
HSP 1 Score: 307 bits (787), Expect = 4.04e-105
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
IDSATVEKWKLWK+EEASSVSEG SWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKTEEASSVSEGFSWDEDDLARFIGDEEQIF 162
BLAST of Cp4.1LG07g10640 vs. NCBI nr
Match:
XP_038890889.1 (uncharacterized protein LOC120080324 [Benincasa hispida])
HSP 1 Score: 255 bits (652), Expect = 1.94e-84
Identity = 136/169 (80.47%), Postives = 147/169 (86.98%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAA-VEDVGNDILAWISVEEETVGELMMLLDDAEKSR 60
M+E+RKRH+FVP E ST+KRPR A EDV +DILAWISVEEETVGELMMLLDD EKSR
Sbjct: 1 MDESRKRHEFVPPEASTEKRPRVAVKEAEDVDDDILAWISVEEETVGELMMLLDDVEKSR 60
Query: 61 PMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLM 120
PM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIKLM
Sbjct: 61 PMEEKVKFIDDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKLM 120
Query: 121 EIDSATVEKWKLW------KSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
EIDS TVEKWKLW + EE S+V +G WDEDDLARFIGDEEQIF
Sbjct: 121 EIDSETVEKWKLWSEDRLKEEEETSAVLDGFCWDEDDLARFIGDEEQIF 169
BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match:
A0A6J1FD19 (uncharacterized protein LOC111444281 OS=Cucurbita moschata OX=3662 GN=LOC111444281 PE=4 SV=1)
HSP 1 Score: 308 bits (790), Expect = 6.82e-106
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
IDSATVEKWKLWKSEEASS+SEGSSWDEDDLARFIGDEE IF
Sbjct: 121 IDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF 162
BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match:
A0A6J1HN50 (uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706 PE=4 SV=1)
HSP 1 Score: 307 bits (787), Expect = 1.96e-105
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP
Sbjct: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME
Sbjct: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
Query: 121 IDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDEEQIF 162
IDSATVEKWKLWK+EEASSVSEG SWDEDDLARFIGDEEQIF
Sbjct: 121 IDSATVEKWKLWKTEEASSVSEGFSWDEDDLARFIGDEEQIF 162
BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match:
A0A5A7UZZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00520 PE=4 SV=1)
HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEE+R H+FV E ST+KR R AA ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61 VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
Query: 121 IDSATVEKWKLW---------KSEEASSVSEGS-SWDEDDLARFIGDEEQI 161
IDS TVEKWK+W + EE S V +G SWDEDDLARF+GDEEQI
Sbjct: 121 IDSETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169
BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match:
A0A5D3CG58 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00940 PE=4 SV=1)
HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEE+R H+FV E ST+KR R AA ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61 VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
Query: 121 IDSATVEKWKLW---------KSEEASSVSEGS-SWDEDDLARFIGDEEQI 161
IDS TVEKWK+W + EE S V +G SWDEDDLARF+GDEEQI
Sbjct: 121 IDSETVEKWKMWSENGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169
BLAST of Cp4.1LG07g10640 vs. ExPASy TrEMBL
Match:
A0A1S3CB71 (uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=4 SV=1)
HSP 1 Score: 233 bits (593), Expect = 9.40e-76
Identity = 127/171 (74.27%), Postives = 143/171 (83.63%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEE+R H+FV E ST+KR R AA ED+ +DILAWIS+EEETVGELMMLLDD EKSRP
Sbjct: 1 MEESRNTHEFVRTEASTEKRQRPAA--EDMDDDILAWISLEEETVGELMMLLDDEEKSRP 60
Query: 61 MAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVDMNGARIKLME 120
+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSESDSS+MASVDMNGARIK+ME
Sbjct: 61 VEEKVKFIEDPYSSAVIFQSSSSYVTINGNEESCGSSFSESDSSMMASVDMNGARIKVME 120
Query: 121 IDSATVEKWKLW---------KSEEASSVSEGS-SWDEDDLARFIGDEEQI 161
IDS TVEKWK+W + EE S V +G SWDEDDLARF+GDEEQI
Sbjct: 121 IDSETVEKWKMWSEDGLMKEEEEEEVSGVLDGIISWDEDDLARFVGDEEQI 169
BLAST of Cp4.1LG07g10640 vs. TAIR 10
Match:
AT5G56880.1 (unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 77.8 bits (190), Expect = 8.9e-15
Identity = 61/170 (35.88%), Postives = 88/170 (51.76%), Query Frame = 0
Query: 1 MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRP 60
MEE R + D +N+T K + G +E T E+M L++ + +
Sbjct: 1 MEEMRNKVD-ENGKNTTAKEVTKKTTMLVAG-------EYDEYTPDEIMSLVESSSPTMT 60
Query: 61 MAE------------KVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMAS 120
E +V+FIDDPY+ ++ QSSS ++TIN NEESCG SFS+SDSSVMAS
Sbjct: 61 TTEIEGTNFSGEGSFRVRFIDDPYAMPVVVQSSSGYITINVNEESCGPSFSDSDSSVMAS 120
Query: 121 VDMNGARIKLMEIDSATVEKWKLWKSEEASSVSEGSSWDEDDLARFIGDE 159
VD +G E + EK W + E + W++D LARF+G++
Sbjct: 121 VDASGLFGCCFEYGN---EKGGAWSTNEVR--ASEYEWNDDMLARFLGED 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023538157.1 | 1.71e-106 | 100.00 | uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo] | [more] |
KAG6586479.1 | 9.92e-106 | 98.77 | hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022938092.1 | 1.41e-105 | 98.77 | uncharacterized protein LOC111444281 [Cucurbita moschata] | [more] |
XP_022965986.1 | 4.04e-105 | 98.77 | uncharacterized protein LOC111465706 [Cucurbita maxima] | [more] |
XP_038890889.1 | 1.94e-84 | 80.47 | uncharacterized protein LOC120080324 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FD19 | 6.82e-106 | 98.77 | uncharacterized protein LOC111444281 OS=Cucurbita moschata OX=3662 GN=LOC1114442... | [more] |
A0A6J1HN50 | 1.96e-105 | 98.77 | uncharacterized protein LOC111465706 OS=Cucurbita maxima OX=3661 GN=LOC111465706... | [more] |
A0A5A7UZZ9 | 9.40e-76 | 74.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CG58 | 9.40e-76 | 74.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CB71 | 9.40e-76 | 74.27 | uncharacterized protein LOC103498512 OS=Cucumis melo OX=3656 GN=LOC103498512 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56880.1 | 8.9e-15 | 35.88 | unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacter... | [more] |