Homology
BLAST of Cp4.1LG04g00470 vs. ExPASy Swiss-Prot
Match:
Q9XFR5 (Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR30 PE=1 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 2.8e-70
Identity = 175/287 (60.98%), Postives = 197/287 (68.64%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSR +RTIYVGNLPGDIR EVEDLFYK FED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGY FDGCRLRVE AHGGR S S+D YS S S+ SRR+DYRVLVTGLPPS
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGR-RFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
+RV+EY+S RS SRSP D +S SRS SR P S+SRS S +RS+
Sbjct: 181 IRVREYES-RSVSRSP--DDSKSYRSRSRSRGP-----SCSYSSKSRSVSPARSI----- 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSI-SEQSQSKSLSRSRSRSRSGSPVS 265
SPR + RS S+ S S+S+S S+SRSRSRS SPVS
Sbjct: 241 ----------SPRSRPLSRSRSLYSSVSRSQSRSKSRSRSRSNSPVS 263
BLAST of Cp4.1LG04g00470 vs. ExPASy Swiss-Prot
Match:
A2RVS6 (Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR34A PE=2 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 9.4e-66
Identity = 174/324 (53.70%), Postives = 202/324 (62.35%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MS R SR+IYVGNLPGDIR E+ED+FYK FE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGG--------RGGHSSSIDHY----SRSGSSRGGVSRRT 120
AI GRDGY DGCRLRVE AHGG RGG+ Y GS+R GVSR +
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 121 DYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLD 180
++RV+V GLP SASWQDLKDHMR+AGDVCF+EV RD G G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 181 DSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRS 240
D+EFRN ++R ++RVK+Y+S RS SRSPSR SRS SRS RSRSR R RS
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSR-------SRSRSRS------RSRSRGRGRS 240
Query: 241 RSQSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSR 291
S+SRSL RS S + S SPR +SLSRS S+SRS SP +
Sbjct: 241 HSRSRSLSRSKS---PRKDLSKSPR----------------RSLSRSISKSRSPSPDKKK 292
BLAST of Cp4.1LG04g00470 vs. ExPASy Swiss-Prot
Match:
O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 2.1e-65
Identity = 181/334 (54.19%), Postives = 207/334 (61.98%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSR+SRT+YVGNLPGDIR REVEDLF K F+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRG-----------GVSRRTD 120
AI+GRDGY FDG RLRVE AHGGR SS S +G RG G SRR++
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR--RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSE 120
Query: 121 YRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDD 180
+RVLVTGLP SASWQDLKDHMR+ GDVCFS+V+RD G G+VDYT Y+DMKYA++KLDD
Sbjct: 121 FRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDD 180
Query: 181 SEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSR 240
+EFRNAFS YVRV+EYDSR+ SRSPSR YS+S SRS RGRS SRSRSRSR
Sbjct: 181 TEFRNAFSNGYVRVREYDSRKD-SRSPSRG---RSYSKSRSRS----RGRSVSRSRSRSR 240
Query: 241 SQSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRS---RSRSRSGSPVS 299
S+SR SP+ K SRRSP +KS SRS RS+SRS SP
Sbjct: 241 SRSR-----------------SPKAKSSRRSP-------AKSTSRSPGPRSKSRSPSP-- 288
BLAST of Cp4.1LG04g00470 vs. ExPASy Swiss-Prot
Match:
F4JHI7 (Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR34B PE=2 SV=1)
HSP 1 Score: 241.9 bits (616), Expect = 9.7e-63
Identity = 164/291 (56.36%), Postives = 183/291 (62.89%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSR+SRTIYVGNLPGDIR REVEDLF K FED RDA+D
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYS------RSGSSRG----GVSRRTDY 120
AIYGRDGY FDG LRVE AHGGR + YS R G G G SRR++Y
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSRRSEY 120
Query: 121 RVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDS 180
RV+V+GLP SASWQDLKDHMR+ G+VCFS+VFRD G GIVDYT+Y+DMKYA LDD+
Sbjct: 121 RVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA---LDDT 180
Query: 181 EFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRS 240
EFRNAFS YVRV+EYDSRR SRSPS RGRS S+SRSR RS
Sbjct: 181 EFRNAFSHEYVRVREYDSRRD--------------SRSPS------RGRSYSKSRSRGRS 240
Query: 241 QSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRS 260
SRS RS S RS S SP+ K RRSP+ S +S SRS+SRS S
Sbjct: 241 PSRSRSRSRS-----RSKSRSPKAKSLRRSPAKSTSRSPRSRSRSKSRSLS 263
BLAST of Cp4.1LG04g00470 vs. ExPASy Swiss-Prot
Match:
Q9NEW6 (Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=6239 GN=rsp-3 PE=1 SV=2)
HSP 1 Score: 186.8 bits (473), Expect = 3.7e-46
Identity = 125/254 (49.21%), Postives = 151/254 (59.45%), Query Frame = 0
Query: 9 IYVGNLPGDIRLREVEDLFYK---------------------FEDVRDAEDAIYGRDGYK 68
+YVGNLPGD+R +EVED+F+K FED RDAEDA+ RDGY+
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYE 70
Query: 69 FDGCRLRVEFAH-------GGR-----GGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGL 128
FDG R+RVEF GGR G H R G GG RRT YRV+V GL
Sbjct: 71 FDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEGL 130
Query: 129 PPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFR-NAF 188
PP+ SWQDLKDHMR AGDVC+++V RD G+V++T Y+D+KYA+RKLDD++FR +
Sbjct: 131 PPTGSWQDLKDHMRDAGDVCYADVARDG---TGVVEFTRYEDVKYAVRKLDDTKFRSHEG 190
Query: 189 SRAYVRVKEYDSR----------RSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRS 219
AY+RV+E +S RS SRSP + R SP SP R RSRSRSRS
Sbjct: 191 ETAYIRVREDNSSGGGSGGGGRDRSRSRSPRAERR-----ASPKYSPRRSRSRSRSRSRS 250
BLAST of Cp4.1LG04g00470 vs. NCBI nr
Match:
XP_023530260.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo] >XP_023530261.1 serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 563 bits (1450), Expect = 7.51e-201
Identity = 312/334 (93.41%), Postives = 312/334 (93.41%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FEDVRDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR 300
HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR
Sbjct: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR 300
Query: 301 SKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE 312
SKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE
Sbjct: 301 SKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE 334
BLAST of Cp4.1LG04g00470 vs. NCBI nr
Match:
KAG6588492.1 (Serine/arginine-rich splicing factor SR30, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 540 bits (1391), Expect = 7.58e-192
Identity = 305/336 (90.77%), Postives = 308/336 (91.67%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FED+RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSRRSYSRSPSRDSR+SDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSL RSHS
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRRSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLRRSHS 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR 300
HSHSGRSTS SPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSR ERKIQNRSRSR
Sbjct: 241 HSHSGRSTSLSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRRERKIQNRSRSR 300
Query: 301 SKSRSLSRSLSPEGRSDRSRSRS--QSVDSRDRYSE 312
SKSRSLSRSLSP+GRSDRSRSRS QSVDSRDRYSE
Sbjct: 301 SKSRSLSRSLSPDGRSDRSRSRSRSQSVDSRDRYSE 335
BLAST of Cp4.1LG04g00470 vs. NCBI nr
Match:
XP_022928780.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita moschata] >XP_022928787.1 serine/arginine-rich splicing factor SR30-like [Cucurbita moschata])
HSP 1 Score: 533 bits (1374), Expect = 2.94e-189
Identity = 301/336 (89.58%), Postives = 307/336 (91.37%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FED+RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSRRSYSRSPSRDSR+SDYSRSPSRSP+GERGRS+SRSRSRSRSQSRSL RSHS
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRRSDYSRSPSRSPHGERGRSQSRSRSRSRSQSRSLRRSHS 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR 300
HSHSGRSTS SPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSR ERK QNRSRSR
Sbjct: 241 HSHSGRSTSLSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRRERKFQNRSRSR 300
Query: 301 SKSRSLSRSLSPEGRSDRSRSRSQS--VDSRDRYSE 312
SKSRSLSRSLSP+GRSDRSRSRS+S VDSRDRYSE
Sbjct: 301 SKSRSLSRSLSPDGRSDRSRSRSRSRSVDSRDRYSE 335
BLAST of Cp4.1LG04g00470 vs. NCBI nr
Match:
XP_022969758.1 (serine/arginine-rich splicing factor SR30-like [Cucurbita maxima] >XP_022969766.1 serine/arginine-rich splicing factor SR30-like [Cucurbita maxima])
HSP 1 Score: 532 bits (1370), Expect = 1.29e-188
Identity = 303/338 (89.64%), Postives = 306/338 (90.53%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FEDVRDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRS----RSRSRSRSRSQSRSLI 240
VRVKEYDSRRSYSRSPSRDSR+SDYSRSPS SPYGERGRS RSRSRSRSRSQSRSL
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRRSDYSRSPSCSPYGERGRSQSRSRSRSRSRSRSQSRSLR 240
Query: 241 RSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNR 300
RS SHSHSGRSTS SPRLKHSR+SPSISEQSQSKSLSRSRSRSRSGSPVSSR ERKIQNR
Sbjct: 241 RSRSHSHSGRSTSLSPRLKHSRQSPSISEQSQSKSLSRSRSRSRSGSPVSSRRERKIQNR 300
Query: 301 SRSRSKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE 312
SRSRSKSRSLSRSLSP+GRSDRSRSRSQSVDSRDRYSE
Sbjct: 301 SRSRSKSRSLSRSLSPDGRSDRSRSRSQSVDSRDRYSE 337
BLAST of Cp4.1LG04g00470 vs. NCBI nr
Match:
KAG7022321.1 (Serine/arginine-rich splicing factor SR30 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 526 bits (1355), Expect = 8.49e-186
Identity = 305/372 (81.99%), Postives = 308/372 (82.80%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK------------------------------- 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKLMIGNYGPIVDIDLKIPPRPPGYAFVEVRLN 60
Query: 61 ---------------------------FEDVRDAEDAIYGRDGYKFDGCRLRVEFAHGGR 120
FED+RDAEDAIYGRDGYKFDGCRLRVEFAHGGR
Sbjct: 61 LDAFGTQSLWPEYFSSESLQIGVLSFWFEDIRDAEDAIYGRDGYKFDGCRLRVEFAHGGR 120
Query: 121 GGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRD 180
G HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRD
Sbjct: 121 G-HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRD 180
Query: 181 RGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSD 240
RGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSR+SD
Sbjct: 181 RGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRRSD 240
Query: 241 YSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSIS 300
YSRSPSRSPYGERGRSRSRSRSRSRSQSRSL RSHSHSHSGRSTS SPRLKHSRRSPSIS
Sbjct: 241 YSRSPSRSPYGERGRSRSRSRSRSRSQSRSLRRSHSHSHSGRSTSLSPRLKHSRRSPSIS 300
Query: 301 EQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSRSKSRSLSRSLSPEGRSDRSRSRS- 312
EQSQSKSLSRSRSRSRSGSPVSSR ERKIQNRSRSRSKSRSLSRSLSP+GRSDRSRSRS
Sbjct: 301 EQSQSKSLSRSRSRSRSGSPVSSRRERKIQNRSRSRSKSRSLSRSLSPDGRSDRSRSRSR 360
BLAST of Cp4.1LG04g00470 vs. ExPASy TrEMBL
Match:
A0A6J1ESI8 (serine/arginine-rich splicing factor SR30-like OS=Cucurbita moschata OX=3662 GN=LOC111435599 PE=4 SV=1)
HSP 1 Score: 533 bits (1374), Expect = 1.42e-189
Identity = 301/336 (89.58%), Postives = 307/336 (91.37%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FED+RDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDIRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSRRSYSRSPSRDSR+SDYSRSPSRSP+GERGRS+SRSRSRSRSQSRSL RSHS
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRRSDYSRSPSRSPHGERGRSQSRSRSRSRSQSRSLRRSHS 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR 300
HSHSGRSTS SPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSR ERK QNRSRSR
Sbjct: 241 HSHSGRSTSLSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRRERKFQNRSRSR 300
Query: 301 SKSRSLSRSLSPEGRSDRSRSRSQS--VDSRDRYSE 312
SKSRSLSRSLSP+GRSDRSRSRS+S VDSRDRYSE
Sbjct: 301 SKSRSLSRSLSPDGRSDRSRSRSRSRSVDSRDRYSE 335
BLAST of Cp4.1LG04g00470 vs. ExPASy TrEMBL
Match:
A0A6J1HYQ5 (serine/arginine-rich splicing factor SR30-like OS=Cucurbita maxima OX=3661 GN=LOC111468858 PE=4 SV=1)
HSP 1 Score: 532 bits (1370), Expect = 6.23e-189
Identity = 303/338 (89.64%), Postives = 306/338 (90.53%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FEDVRDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-HSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRS----RSRSRSRSRSQSRSLI 240
VRVKEYDSRRSYSRSPSRDSR+SDYSRSPS SPYGERGRS RSRSRSRSRSQSRSL
Sbjct: 181 VRVKEYDSRRSYSRSPSRDSRRSDYSRSPSCSPYGERGRSQSRSRSRSRSRSRSQSRSLR 240
Query: 241 RSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNR 300
RS SHSHSGRSTS SPRLKHSR+SPSISEQSQSKSLSRSRSRSRSGSPVSSR ERKIQNR
Sbjct: 241 RSRSHSHSGRSTSLSPRLKHSRQSPSISEQSQSKSLSRSRSRSRSGSPVSSRRERKIQNR 300
Query: 301 SRSRSKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE 312
SRSRSKSRSLSRSLSP+GRSDRSRSRSQSVDSRDRYSE
Sbjct: 301 SRSRSKSRSLSRSLSPDGRSDRSRSRSQSVDSRDRYSE 337
BLAST of Cp4.1LG04g00470 vs. ExPASy TrEMBL
Match:
A0A6J1C3Z4 (serine/arginine-rich splicing factor SR30 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007710 PE=4 SV=1)
HSP 1 Score: 475 bits (1222), Expect = 1.33e-166
Identity = 276/335 (82.39%), Postives = 285/335 (85.07%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRL+EVEDLFYK FEDVRDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLKEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG SSSID YSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-QSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRSY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSRRSYSRSPS DSR+SDYSRSPSRSPY ERGRSRSRSRS SRS
Sbjct: 181 VRVKEYDSRRSYSRSPSHDSRRSDYSRSPSRSPYRERGRSRSRSRSLSRS---------- 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRH-ERKIQNRSRS 300
HSHSGRSTS SPRL HSRRS SISEQS+SKSLSRSRSRSRS SP+SSRH E K ++RSRS
Sbjct: 241 HSHSGRSTSLSPRLNHSRRSRSISEQSRSKSLSRSRSRSRSRSPISSRHRESKPRSRSRS 300
Query: 301 RSKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE 312
RS SRSLSRSLSP RSD+SRSR SV+SRDRYSE
Sbjct: 301 RSNSRSLSRSLSPNARSDQSRSRGLSVESRDRYSE 324
BLAST of Cp4.1LG04g00470 vs. ExPASy TrEMBL
Match:
A0A6J1C1X9 (serine/arginine-rich splicing factor SR30 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007710 PE=4 SV=1)
HSP 1 Score: 469 bits (1207), Expect = 2.95e-164
Identity = 276/339 (81.42%), Postives = 285/339 (84.07%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRL+EVEDLFYK FEDVRDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLKEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG SSSID YSRSGSSRGGVSRRTDYRVLVTGLPPS
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-QSSSIDRYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSR+Y
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRSY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSRRSYSRSPS DSR+SDYSRSPSRSPY ERGRSRSRSRS SRS
Sbjct: 181 VRVKEYDSRRSYSRSPSHDSRRSDYSRSPSRSPYRERGRSRSRSRSLSRS---------- 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRH-ERKIQNRSRS 300
HSHSGRSTS SPRL HSRRS SISEQS+SKSLSRSRSRSRS SP+SSRH E K ++RSRS
Sbjct: 241 HSHSGRSTSLSPRLNHSRRSRSISEQSRSKSLSRSRSRSRSRSPISSRHRESKPRSRSRS 300
Query: 301 RSKSRSLSRSLSPE----GRSDRSRSRSQSVDSRDRYSE 312
RS SRSLSRSLSP RSD+SRSR SV+SRDRYSE
Sbjct: 301 RSNSRSLSRSLSPNVVILARSDQSRSRGLSVESRDRYSE 328
BLAST of Cp4.1LG04g00470 vs. ExPASy TrEMBL
Match:
A0A1S3BPM4 (serine/arginine-rich splicing factor SR30 OS=Cucumis melo OX=3656 GN=LOC103492152 PE=4 SV=1)
HSP 1 Score: 456 bits (1174), Expect = 2.33e-159
Identity = 269/334 (80.54%), Postives = 278/334 (83.23%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSRNSRTIYVGNLPGDIRLREVEDLFYK FEDVRDAED
Sbjct: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGYKFDGCRLRVEFAHGGRG HSSS+D YSRSGSSRGGV RRTDYRVLVTGLP S
Sbjct: 61 AIYGRDGYKFDGCRLRVEFAHGGRG-HSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY
Sbjct: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
VRVKEYDSR SYSRSPS DSR+SDYSRSPS SPY RGRS+SRSRSRSRS+S
Sbjct: 181 VRVKEYDSRHSYSRSPSLDSRRSDYSRSPSGSPYRGRGRSQSRSRSRSRSRS-------- 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSRHERKIQNRSRSR 300
+SGRSTS SPR KHSRRS SISEQS S+S SRSRSRSRS SPVSSRH +R RSR
Sbjct: 241 --YSGRSTSLSPRHKHSRRSRSISEQSLSRSRSRSRSRSRSRSPVSSRHR---ASRPRSR 300
Query: 301 SKSRSLSRSLSPEGRSDRSRSRSQSVDSRDRYSE 312
S+SRS SRSLSP RSDRSRSRSQSVDSRD+YSE
Sbjct: 301 SRSRSKSRSLSPNVRSDRSRSRSQSVDSRDQYSE 320
BLAST of Cp4.1LG04g00470 vs. TAIR 10
Match:
AT1G09140.1 (SERINE-ARGININE PROTEIN 30 )
HSP 1 Score: 266.9 bits (681), Expect = 2.0e-71
Identity = 175/287 (60.98%), Postives = 197/287 (68.64%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSR +RTIYVGNLPGDIR EVEDLFYK FED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGY FDGCRLRVE AHGGR S S+D YS S S+ SRR+DYRVLVTGLPPS
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGR-RFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSRSQSRSLIRSHS 240
+RV+EY+S RS SRSP D +S SRS SR P S+SRS S +RS+
Sbjct: 181 IRVREYES-RSVSRSP--DDSKSYRSRSRSRGP-----SCSYSSKSRSVSPARSI----- 240
Query: 241 HSHSGRSTSFSPRLKHSRRSPSI-SEQSQSKSLSRSRSRSRSGSPVS 265
SPR + RS S+ S S+S+S S+SRSRSRS SPVS
Sbjct: 241 ----------SPRSRPLSRSRSLYSSVSRSQSRSKSRSRSRSNSPVS 263
BLAST of Cp4.1LG04g00470 vs. TAIR 10
Match:
AT1G09140.2 (SERINE-ARGININE PROTEIN 30 )
HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 164/252 (65.08%), Postives = 181/252 (71.83%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSR +RTIYVGNLPGDIR EVEDLFYK FED RDA+D
Sbjct: 1 MSSRWNRTIYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRGGVSRRTDYRVLVTGLPPS 120
AIYGRDGY FDGCRLRVE AHGGR S S+D YS S S+ SRR+DYRVLVTGLPPS
Sbjct: 61 AIYGRDGYDFDGCRLRVEIAHGGR-RFSPSVDRYSSSYSASRAPSRRSDYRVLVTGLPPS 120
Query: 121 ASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAY 180
ASWQDLKDHMR+AGDVCFSEVF DR GM+G+VDY+NYDDMKYAIRKLD +EFRNAFS AY
Sbjct: 121 ASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAIRKLDATEFRNAFSSAY 180
Query: 181 VRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSP---YGERGRSRSRSRS---RSR--SQS 223
+RV+EY+S RS SRSP D +S SRS SR P Y + RS S +RS RSR S+S
Sbjct: 181 IRVREYES-RSVSRSP--DDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPLSRS 240
BLAST of Cp4.1LG04g00470 vs. TAIR 10
Match:
AT3G49430.1 (SER/ARG-rich protein 34A )
HSP 1 Score: 251.9 bits (642), Expect = 6.7e-67
Identity = 174/324 (53.70%), Postives = 202/324 (62.35%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MS R SR+IYVGNLPGDIR E+ED+FYK FE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGG--------RGGHSSSIDHY----SRSGSSRGGVSRRT 120
AI GRDGY DGCRLRVE AHGG RGG+ Y GS+R GVSR +
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 121 DYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLD 180
++RV+V GLP SASWQDLKDHMR+AGDVCF+EV RD G G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 181 DSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRS 240
D+EFRN ++R ++RVK+Y+S RS SRSPSR SRS SRS RSRSR R RS
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSR-------SRSRSRS------RSRSRGRGRS 240
Query: 241 RSQSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSR 291
S+SRSL RS S + S SPR +SLSRS S+SRS SP +
Sbjct: 241 HSRSRSLSRSKS---PRKDLSKSPR----------------RSLSRSISKSRSPSPDKKK 292
BLAST of Cp4.1LG04g00470 vs. TAIR 10
Match:
AT3G49430.3 (SER/ARG-rich protein 34A )
HSP 1 Score: 251.9 bits (642), Expect = 6.7e-67
Identity = 174/324 (53.70%), Postives = 202/324 (62.35%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MS R SR+IYVGNLPGDIR E+ED+FYK FE RDAED
Sbjct: 1 MSGRFSRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGG--------RGGHSSSIDHY----SRSGSSRGGVSRRT 120
AI GRDGY DGCRLRVE AHGG RGG+ Y GS+R GVSR +
Sbjct: 61 AIKGRDGYNLDGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHS 120
Query: 121 DYRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLD 180
++RV+V GLP SASWQDLKDHMR+AGDVCF+EV RD G G+VDYTNYDDMKYAIRKLD
Sbjct: 121 EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLD 180
Query: 181 DSEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRS 240
D+EFRN ++R ++RVK+Y+S RS SRSPSR SRS SRS RSRSR R RS
Sbjct: 181 DTEFRNPWARGFIRVKKYESSRSRSRSPSR-------SRSRSRS------RSRSRGRGRS 240
Query: 241 RSQSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRSRSRSRSGSPVSSR 291
S+SRSL RS S + S SPR +SLSRS S+SRS SP +
Sbjct: 241 HSRSRSLSRSKS---PRKDLSKSPR----------------RSLSRSISKSRSPSPDKKK 292
BLAST of Cp4.1LG04g00470 vs. TAIR 10
Match:
AT1G02840.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 251.5 bits (641), Expect = 8.7e-67
Identity = 170/298 (57.05%), Postives = 193/298 (64.77%), Query Frame = 0
Query: 1 MSSRNSRTIYVGNLPGDIRLREVEDLFYK----------------------FEDVRDAED 60
MSSR+SRT+YVGNLPGDIR REVEDLF K F+D RDAED
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 61 AIYGRDGYKFDGCRLRVEFAHGGRGGHSSSIDHYSRSGSSRG-----------GVSRRTD 120
AI+GRDGY FDG RLRVE AHGGR SS S +G RG G SRR++
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHGGR--RSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSE 120
Query: 121 YRVLVTGLPPSASWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDD 180
+RVLVTGLP SASWQDLKDHMR+ GDVCFS+V+RD G G+VDYT Y+DMKYA++KLDD
Sbjct: 121 FRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDD 180
Query: 181 SEFRNAFSRAYVRVKEYDSRRSYSRSPSRDSRQSDYSRSPSRSPYGERGRSRSRSRSRSR 240
+EFRNAFS YVRV+EYDSR+ SRSPSR YS+S SRS RGRS SRSRSRSR
Sbjct: 181 TEFRNAFSNGYVRVREYDSRKD-SRSPSRG---RSYSKSRSRS----RGRSVSRSRSRSR 240
Query: 241 SQSRSLIRSHSHSHSGRSTSFSPRLKHSRRSPSISEQSQSKSLSRS---RSRSRSGSP 263
S+SR SP+ K SRRSP +KS SRS RS+SRS SP
Sbjct: 241 SRSR-----------------SPKAKSSRRSP-------AKSTSRSPGPRSKSRSPSP 264
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9XFR5 | 2.8e-70 | 60.98 | Serine/arginine-rich splicing factor SR30 OS=Arabidopsis thaliana OX=3702 GN=SR3... | [more] |
A2RVS6 | 9.4e-66 | 53.70 | Serine/arginine-rich splicing factor SR34A OS=Arabidopsis thaliana OX=3702 GN=SR... | [more] |
O22315 | 2.1e-65 | 54.19 | Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3... | [more] |
F4JHI7 | 9.7e-63 | 56.36 | Serine/arginine-rich splicing factor SR34B OS=Arabidopsis thaliana OX=3702 GN=SR... | [more] |
Q9NEW6 | 3.7e-46 | 49.21 | Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans OX=62... | [more] |
Match Name | E-value | Identity | Description | |
XP_023530260.1 | 7.51e-201 | 93.41 | serine/arginine-rich splicing factor SR30-like [Cucurbita pepo subsp. pepo] >XP_... | [more] |
KAG6588492.1 | 7.58e-192 | 90.77 | Serine/arginine-rich splicing factor SR30, partial [Cucurbita argyrosperma subsp... | [more] |
XP_022928780.1 | 2.94e-189 | 89.58 | serine/arginine-rich splicing factor SR30-like [Cucurbita moschata] >XP_02292878... | [more] |
XP_022969758.1 | 1.29e-188 | 89.64 | serine/arginine-rich splicing factor SR30-like [Cucurbita maxima] >XP_022969766.... | [more] |
KAG7022321.1 | 8.49e-186 | 81.99 | Serine/arginine-rich splicing factor SR30 [Cucurbita argyrosperma subsp. argyros... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ESI8 | 1.42e-189 | 89.58 | serine/arginine-rich splicing factor SR30-like OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1HYQ5 | 6.23e-189 | 89.64 | serine/arginine-rich splicing factor SR30-like OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
A0A6J1C3Z4 | 1.33e-166 | 82.39 | serine/arginine-rich splicing factor SR30 isoform X2 OS=Momordica charantia OX=3... | [more] |
A0A6J1C1X9 | 2.95e-164 | 81.42 | serine/arginine-rich splicing factor SR30 isoform X1 OS=Momordica charantia OX=3... | [more] |
A0A1S3BPM4 | 2.33e-159 | 80.54 | serine/arginine-rich splicing factor SR30 OS=Cucumis melo OX=3656 GN=LOC10349215... | [more] |