Homology
BLAST of Cmc12g0318921 vs. NCBI nr
Match:
TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 387.5 bits (994), Expect = 8.0e-104
Identity = 186/208 (89.42%), Postives = 195/208 (93.75%), Query Frame = 0
Query: 1 MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYT 60
MWKEAIKSELDSL MNHTW+LVDLPMG KPIRCKWIFKRKTKPNG I+RYKARLVVVGYT
Sbjct: 848 MWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 907
Query: 61 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 120
QK+G+DYFDTYS +TKITTIR LI LAAIH+ LIHQMDVKTAFLNG+LEEEIYMTQPEGF
Sbjct: 908 QKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGF 967
Query: 121 QISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILI 180
+ISGQENKVCKLRKSLYGLKQ PKQWYE FN TLI NGFKINSSDTCVYSK+ GADCILI
Sbjct: 968 KISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI 1027
Query: 181 CLYVDDMLIFGTNMELITDTKLFLSSHF 209
CLYVDDMLIFGTNMELITDTK FLSSHF
Sbjct: 1028 CLYVDDMLIFGTNMELITDTKYFLSSHF 1055
BLAST of Cmc12g0318921 vs. NCBI nr
Match:
KAD6453934.1 (hypothetical protein E3N88_08640 [Mikania micrantha])
HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78
Identity = 143/208 (68.75%), Postives = 172/208 (82.69%), Query Frame = 0
Query: 1 MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYT 60
+WKEAIKSE+DS++ NHTW+L DLP G KPI KWIFK+K +P+G++D+YKARLV+ G+T
Sbjct: 199 LWKEAIKSEVDSILSNHTWELTDLPKGNKPIGSKWIFKKKLRPDGTVDKYKARLVIRGFT 258
Query: 61 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 120
QK G+DYFDTYS +TKITTIR LI +AAI+ LIHQMDVKTAFLNGDL+EEIYM QPEGF
Sbjct: 259 QKHGLDYFDTYSPVTKITTIRSLISIAAINGLLIHQMDVKTAFLNGDLDEEIYMLQPEGF 318
Query: 121 QISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILI 180
+SG E+KVCKLRKSLYGLKQ PK+WYE F+ TL +G+ +N+SD+CVYSK +LI
Sbjct: 319 VVSGLESKVCKLRKSLYGLKQAPKKWYEKFDRTLKQDGYIVNNSDSCVYSKRSKTGYVLI 378
Query: 181 CLYVDDMLIFGTNMELITDTKLFLSSHF 209
CLYVDDMLIFG +M I TK FLSS F
Sbjct: 379 CLYVDDMLIFGADMHDINQTKAFLSSKF 406
BLAST of Cmc12g0318921 vs. NCBI nr
Match:
KAG7551885.1 (Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 295.0 bits (754), Expect = 5.4e-76
Identity = 135/207 (65.22%), Postives = 167/207 (80.68%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSID++KARLV G+ Q
Sbjct: 821 WKEAVNNEFDSIMTNHTWEIVDLPRGCKAIRCKWILKKKFKADGSIDKFKARLVAQGFAQ 880
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K+G+DYFDTY+ +TKI +IR L+ +A+ H ++HQMDVKTAFLNGDL EEIYM QPEGF
Sbjct: 881 KQGVDYFDTYAPVTKIASIRMLLAVASAHKLVVHQMDVKTAFLNGDLHEEIYMMQPEGFI 940
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILIC 181
I GQENKVCKL KSLYGLKQ PKQW+E F+ TL+ NGF N DTCV+SKV ++IC
Sbjct: 941 IEGQENKVCKLIKSLYGLKQAPKQWFEKFSNTLLENGFVSNEGDTCVFSKVHEHGYVIIC 1000
Query: 182 LYVDDMLIFGTNMELITDTKLFLSSHF 209
LYVDDMLI GT++E++ DTK+FLSS F
Sbjct: 1001 LYVDDMLILGTSLEIVCDTKVFLSSKF 1027
BLAST of Cmc12g0318921 vs. NCBI nr
Match:
KAG7592238.1 (Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa])
HSP 1 Score: 295.0 bits (754), Expect = 5.4e-76
Identity = 135/207 (65.22%), Postives = 167/207 (80.68%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSID++KARLV G+ Q
Sbjct: 821 WKEAVNNEFDSIMTNHTWEIVDLPRGCKAIRCKWILKKKFKADGSIDKFKARLVAQGFAQ 880
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K+G+DYFDTY+ +TKI +IR L+ +A+ H ++HQMDVKTAFLNGDL EEIYM QPEGF
Sbjct: 881 KQGVDYFDTYAPVTKIASIRMLLAVASAHKLVVHQMDVKTAFLNGDLHEEIYMMQPEGFI 940
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILIC 181
I GQENKVCKL KSLYGLKQ PKQW+E F+ TL+ NGF N DTCV+SKV ++IC
Sbjct: 941 IEGQENKVCKLIKSLYGLKQAPKQWFEKFSNTLLENGFVSNEGDTCVFSKVHEHGYVIIC 1000
Query: 182 LYVDDMLIFGTNMELITDTKLFLSSHF 209
LYVDDMLI GT++E++ DTK+FLSS F
Sbjct: 1001 LYVDDMLILGTSLEIVCDTKVFLSSKF 1027
BLAST of Cmc12g0318921 vs. NCBI nr
Match:
KAG7571733.1 (Integrase catalytic core [Arabidopsis suecica])
HSP 1 Score: 295.0 bits (754), Expect = 5.4e-76
Identity = 135/207 (65.22%), Postives = 167/207 (80.68%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
WKEA+ +E DS++ NHTW++VDLP G K IRCKWI K+K K +GSID++KARLV G+ Q
Sbjct: 790 WKEAVNNEFDSIMTNHTWEIVDLPRGCKAIRCKWILKKKFKADGSIDKFKARLVAQGFAQ 849
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K+G+DYFDTY+ +TKI +IR L+ +A+ H ++HQMDVKTAFLNGDL EEIYM QPEGF
Sbjct: 850 KQGVDYFDTYAPVTKIASIRMLLAVASAHKLVVHQMDVKTAFLNGDLHEEIYMMQPEGFI 909
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILIC 181
I GQENKVCKL KSLYGLKQ PKQW+E F+ TL+ NGF N DTCV+SKV ++IC
Sbjct: 910 IEGQENKVCKLIKSLYGLKQAPKQWFEKFSNTLLENGFVSNEGDTCVFSKVHEHGYVIIC 969
Query: 182 LYVDDMLIFGTNMELITDTKLFLSSHF 209
LYVDDMLI GT++E++ DTK+FLSS F
Sbjct: 970 LYVDDMLILGTSLEIVCDTKVFLSSKF 996
BLAST of Cmc12g0318921 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 206.5 bits (524), Expect = 3.3e-52
Identity = 104/206 (50.49%), Postives = 145/206 (70.39%), Query Frame = 0
Query: 4 EAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQKR 63
+A++ E++SL N T+ LV+LP GK+P++CKW+FK K + + RYKARLVV G+ QK+
Sbjct: 828 KAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKK 887
Query: 64 GIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQIS 123
GID+ + +S + K+T+IR ++ LAA + Q+DVKTAFL+GDLEEEIYM QPEGF+++
Sbjct: 888 GIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVA 947
Query: 124 GQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGA-DCILICL 183
G+++ VCKL KSLYGLKQ P+QWY F+ + + + SD CVY K F + I++ L
Sbjct: 948 GKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLL 1007
Query: 184 YVDDMLIFGTNMELITDTKLFLSSHF 209
YVDDMLI G + LI K LS F
Sbjct: 1008 YVDDMLIVGKDKGLIAKLKGDLSKSF 1033
BLAST of Cmc12g0318921 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 4.3e-44
Identity = 93/220 (42.27%), Postives = 138/220 (62.73%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPI-RCKWIFKRKTKPNGSIDRYKARLVVVGYT 61
W+ A+ SE+++ + NHTWDLV P I C+WIF +K +GS++RYKARLV GY
Sbjct: 968 WRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYN 1027
Query: 62 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 121
Q+ G+DY +T+S + K T+IR ++ +A S+ I Q+DV AFL G L +++YM+QP GF
Sbjct: 1028 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGF 1087
Query: 122 QISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILI 181
+ N VCKLRK+LYGLKQ P+ WY L+ GF + SDT ++ G + +
Sbjct: 1088 IDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYM 1147
Query: 182 CLYVDDMLIFGTNMELITDTKLFLSSHFYIFVNDELGLYI 221
+YVDD+LI G + L+ +T LS F + ++EL ++
Sbjct: 1148 LVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1187
BLAST of Cmc12g0318921 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43
Identity = 91/220 (41.36%), Postives = 138/220 (62.73%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPI-RCKWIFKRKTKPNGSIDRYKARLVVVGYT 61
W++A+ SE+++ + NHTWDLV P I C+WIF +K +GS++RYKARLV GY
Sbjct: 951 WRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYN 1010
Query: 62 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 121
Q+ G+DY +T+S + K T+IR ++ +A S+ I Q+DV AFL G L +E+YM+QP GF
Sbjct: 1011 QRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGF 1070
Query: 122 QISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILI 181
+ + VC+LRK++YGLKQ P+ WY L+ GF + SDT ++ G I +
Sbjct: 1071 VDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYM 1130
Query: 182 CLYVDDMLIFGTNMELITDTKLFLSSHFYIFVNDELGLYI 221
+YVDD+LI G + L+ T LS F + +++L ++
Sbjct: 1131 LVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFL 1170
BLAST of Cmc12g0318921 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 88/221 (39.82%), Postives = 133/221 (60.18%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
W+EAI +EL++ +N+TW + P K + +W+F K G+ RYKARLV G+TQ
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K IDY +T++ + +I++ R ++ L ++ +HQMDVKTAFLNG L+EEIYM P+G
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG-- 1025
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFG--ADCIL 181
IS + VCKL K++YGLKQ + W+E F L F +S D C+Y G + I
Sbjct: 1026 ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIY 1085
Query: 182 ICLYVDDMLIFGTNMELITDTKLFLSSHFYIFVNDELGLYI 221
+ LYVDD++I +M + + K +L F + +E+ +I
Sbjct: 1086 VLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFI 1124
BLAST of Cmc12g0318921 vs. ExPASy Swiss-Prot
Match:
Q12472 (Transposon Ty2-DR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-DR1 PE=1 SV=3)
HSP 1 Score: 86.3 bits (212), Expect = 5.0e-16
Identity = 67/215 (31.16%), Postives = 104/215 (48.37%), Query Frame = 0
Query: 4 EAIKSELDSLVMNHTWDL--------VDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLV 63
EA E++ L+ +TWD +D KK I +IF +K +KAR V
Sbjct: 1267 EAYHKEINQLLRMNTWDTNKYYDRNDID---PKKVINSMFIFNKKRD-----GTHKARFV 1326
Query: 64 VVGYTQKRGIDYFDTYSLITKITTIRDLIVLAAI-----HSFLIHQMDVKTAFLNGDLEE 123
G I + DTY + T+ ++ ++ + + I Q+D+ +A+L D++E
Sbjct: 1327 ARG-----DIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKE 1386
Query: 124 EIYMTQPEGFQISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYS 183
E+Y+ P G +K+ +LRKSLYGLKQ WYE LIN + + +S
Sbjct: 1387 ELYIRPPPHL---GLNDKLLRLRKSLYGLKQSGANWYETIKSYLIN---CCDMQEVRGWS 1446
Query: 184 KVFGADCILICLYVDDMLIF----GTNMELITDTK 202
VF + ICL+VDDM++F N ++IT K
Sbjct: 1447 CVFKNSQVTICLFVDDMILFSKDLNANKKIITTLK 1462
BLAST of Cmc12g0318921 vs. ExPASy TrEMBL
Match:
A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 3.9e-104
Identity = 186/208 (89.42%), Postives = 195/208 (93.75%), Query Frame = 0
Query: 1 MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYT 60
MWKEAIKSELDSL MNHTW+LVDLPMG KPIRCKWIFKRKTKPNG I+RYKARLVVVGYT
Sbjct: 848 MWKEAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 907
Query: 61 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 120
QK+G+DYFDTYS +TKITTIR LI LAAIH+ LIHQMDVKTAFLNG+LEEEIYMTQPEGF
Sbjct: 908 QKQGVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLNGNLEEEIYMTQPEGF 967
Query: 121 QISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILI 180
+ISGQENKVCKLRKSLYGLKQ PKQWYE FN TLI NGFKINSSDTCVYSK+ GADCILI
Sbjct: 968 KISGQENKVCKLRKSLYGLKQAPKQWYEKFNNTLITNGFKINSSDTCVYSKMVGADCILI 1027
Query: 181 CLYVDDMLIFGTNMELITDTKLFLSSHF 209
CLYVDDMLIFGTNMELITDTK FLSSHF
Sbjct: 1028 CLYVDDMLIFGTNMELITDTKYFLSSHF 1055
BLAST of Cmc12g0318921 vs. ExPASy TrEMBL
Match:
A0A5N6PGV2 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_08640 PE=4 SV=1)
HSP 1 Score: 303.9 bits (777), Expect = 5.6e-79
Identity = 143/208 (68.75%), Postives = 172/208 (82.69%), Query Frame = 0
Query: 1 MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYT 60
+WKEAIKSE+DS++ NHTW+L DLP G KPI KWIFK+K +P+G++D+YKARLV+ G+T
Sbjct: 199 LWKEAIKSEVDSILSNHTWELTDLPKGNKPIGSKWIFKKKLRPDGTVDKYKARLVIRGFT 258
Query: 61 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 120
QK G+DYFDTYS +TKITTIR LI +AAI+ LIHQMDVKTAFLNGDL+EEIYM QPEGF
Sbjct: 259 QKHGLDYFDTYSPVTKITTIRSLISIAAINGLLIHQMDVKTAFLNGDLDEEIYMLQPEGF 318
Query: 121 QISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILI 180
+SG E+KVCKLRKSLYGLKQ PK+WYE F+ TL +G+ +N+SD+CVYSK +LI
Sbjct: 319 VVSGLESKVCKLRKSLYGLKQAPKKWYEKFDRTLKQDGYIVNNSDSCVYSKRSKTGYVLI 378
Query: 181 CLYVDDMLIFGTNMELITDTKLFLSSHF 209
CLYVDDMLIFG +M I TK FLSS F
Sbjct: 379 CLYVDDMLIFGADMHDINQTKAFLSSKF 406
BLAST of Cmc12g0318921 vs. ExPASy TrEMBL
Match:
A0A2N9EQT1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4851 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 1.3e-78
Identity = 140/207 (67.63%), Postives = 173/207 (83.57%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
WK+AI SEL+S++ NHTW+LV+LP G K I KW+FK+K K +GSI+++KARLV GYTQ
Sbjct: 288 WKDAIHSELESIMGNHTWELVELPRGCKTIGSKWVFKKKLKADGSIEKFKARLVAKGYTQ 347
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K GIDYFDTYS +T++TTIR L+ +A+I+ +IHQMDVKTAFLNGDL+EEIYM QPEGF
Sbjct: 348 KEGIDYFDTYSPVTRLTTIRILVAIASIYKLIIHQMDVKTAFLNGDLDEEIYMDQPEGFV 407
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILIC 181
+ GQENKVCKLRKSLYGLKQ PKQW+E F+ TL++NGF +N SD CVYSK GA ++IC
Sbjct: 408 VQGQENKVCKLRKSLYGLKQAPKQWHEKFDKTLVSNGFAVNESDRCVYSKFSGASGVIIC 467
Query: 182 LYVDDMLIFGTNMELITDTKLFLSSHF 209
LYVDDMLIFGT+M + +TK FLSS+F
Sbjct: 468 LYVDDMLIFGTDMNAVKNTKDFLSSNF 494
BLAST of Cmc12g0318921 vs. ExPASy TrEMBL
Match:
A0A2N9H4B0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 1.3e-78
Identity = 140/207 (67.63%), Postives = 173/207 (83.57%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
WK+AI SEL+S++ NHTW+LV+LP G K I KW+FK+K K +GSI+++KARLV GYTQ
Sbjct: 798 WKDAIHSELESIMGNHTWELVELPRGCKTIGSKWVFKKKLKADGSIEKFKARLVAKGYTQ 857
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K GIDYFDTYS +T++TTIR L+ +A+I+ +IHQMDVKTAFLNGDL+EEIYM QPEGF
Sbjct: 858 KEGIDYFDTYSPVTRLTTIRILVAIASIYKLIIHQMDVKTAFLNGDLDEEIYMDQPEGFV 917
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILIC 181
+ GQENKVCKLRKSLYGLKQ PKQW+E F+ TL++NGF +N SD CVYSK GA ++IC
Sbjct: 918 VQGQENKVCKLRKSLYGLKQAPKQWHEKFDKTLVSNGFAVNESDRCVYSKFSGASGVIIC 977
Query: 182 LYVDDMLIFGTNMELITDTKLFLSSHF 209
LYVDDMLIFGT+M + +TK FLSS+F
Sbjct: 978 LYVDDMLIFGTDMNAVKNTKDFLSSNF 1004
BLAST of Cmc12g0318921 vs. ExPASy TrEMBL
Match:
A0A151TB60 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_018881 PE=4 SV=1)
HSP 1 Score: 290.8 bits (743), Expect = 4.9e-75
Identity = 134/207 (64.73%), Postives = 170/207 (82.13%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
WKEAI+ E+DS+ N+TW LVDLP G KPI CKWIFKRK P+GSI++YKARLV G+TQ
Sbjct: 506 WKEAIRIEIDSIKENNTWTLVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQ 565
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGFQ 121
K+ ID+FDT++ + +I++IR LI LA+IH +IHQMDVKTAFLNG+LEEEIYMTQPEG +
Sbjct: 566 KQDIDFFDTFAPVARISSIRVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCE 625
Query: 122 ISGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGADCILIC 181
+ GQENKVC+L KSLYGLKQ PKQW+E F+ L+N+GF +S+D CVY+K DC++IC
Sbjct: 626 VPGQENKVCRLLKSLYGLKQAPKQWHEKFDQVLLNDGFSSSSADKCVYTKSMNDDCVIIC 685
Query: 182 LYVDDMLIFGTNMELITDTKLFLSSHF 209
LYVDDMLIFGT +++ TK FL+S+F
Sbjct: 686 LYVDDMLIFGTCDDIVFKTKSFLASNF 712
BLAST of Cmc12g0318921 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 189.5 bits (480), Expect = 3.0e-48
Identity = 90/212 (42.45%), Postives = 137/212 (64.62%), Query Frame = 0
Query: 1 MWKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYT 60
+W A+ E+ ++ HTW++ LP KKPI CKW++K K +G+I+RYKARLV GYT
Sbjct: 97 VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156
Query: 61 QKRGIDYFDTYSLITKITTIRDLIVLAAIHSFLIHQMDVKTAFLNGDLEEEIYMTQPEGF 120
Q+ GID+ +T+S + K+T+++ ++ ++AI++F +HQ+D+ AFLNGDL+EEIYM P G+
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
Query: 121 QI----SGQENKVCKLRKSLYGLKQVPKQWYENFNYTLINNGFKINSSDTCVYSKVFGAD 180
S N VC L+KS+YGLKQ +QW+ F+ TLI GF + SD + K+
Sbjct: 217 AARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATL 276
Query: 181 CILICLYVDDMLIFGTNMELITDTKLFLSSHF 209
+ + +YVDD++I N + + K L S F
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCF 308
BLAST of Cmc12g0318921 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 82.8 bits (203), Expect = 3.9e-16
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 2 WKEAIKSELDSLVMNHTWDLVDLPMGKKPIRCKWIFKRKTKPNGSIDRYKARLVVVGYTQ 61
W +A++ ELD+L N TW LV P+ + + CKW+FK K +G++DR KARLV G+ Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 62 KRGIDYFDTYSLITKITTIRDLIVLA 88
+ GI + +TYS + + TIR ++ +A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK06518.1 | 8.0e-104 | 89.42 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAD6453934.1 | 1.2e-78 | 68.75 | hypothetical protein E3N88_08640 [Mikania micrantha] | [more] |
KAG7551885.1 | 5.4e-76 | 65.22 | Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
KAG7592238.1 | 5.4e-76 | 65.22 | Ribonuclease H-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa] | [more] |
KAG7571733.1 | 5.4e-76 | 65.22 | Integrase catalytic core [Arabidopsis suecica] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 3.3e-52 | 50.49 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 4.3e-44 | 42.27 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.2e-43 | 41.36 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P04146 | 1.8e-37 | 39.82 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q12472 | 5.0e-16 | 31.16 | Transposon Ty2-DR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C5T2 | 3.9e-104 | 89.42 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5N6PGV2 | 5.6e-79 | 68.75 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Mikania micran... | [more] |
A0A2N9EQT1 | 1.3e-78 | 67.63 | Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... | [more] |
A0A2N9H4B0 | 1.3e-78 | 67.63 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37208 PE=4 SV=1 | [more] |
A0A151TB60 | 4.9e-75 | 64.73 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanu... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 3.0e-48 | 42.45 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 3.9e-16 | 43.02 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |