Homology
BLAST of Cmc10g0281921 vs. NCBI nr
Match:
KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD+IGRLVKNGLLN+ KD SLPPCESCLE
Sbjct: 329 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLE 388
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 389 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHK 448
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+KFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 449 SEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 508
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMVRSMMSYAQLPS FWGYAVET VHILNNVPSKSVSETPFEL
Sbjct: 509 GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFEL 562
BLAST of Cmc10g0281921 vs. NCBI nr
Match:
KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 447.6 bits (1150), Expect = 6.7e-122
Identity = 216/234 (92.31%), Postives = 224/234 (95.73%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD+IGRLVK+GLLN+ KD SLPPCESCLE
Sbjct: 329 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLE 388
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG FEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 389 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHK 448
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+KFKEYK EVENLLSKKIKI +SDRGGEYMDL FQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 449 SEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQN 508
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMVRSMMSYAQLPS FWGYAVET VHILNNVPSKSVSETPFEL
Sbjct: 509 GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFEL 562
BLAST of Cmc10g0281921 vs. NCBI nr
Match:
KAA0060534.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK00774.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 441.4 bits (1134), Expect = 4.8e-120
Identity = 212/234 (90.60%), Postives = 222/234 (94.87%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRIS NNNTYLWHLRLGHINLD+IGRLVKNGLLN+ +DDSLPPCESCLE
Sbjct: 301 MFRTANTQNKRQRISSNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLE 360
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKA GGFEYF+SFIDDYS YGYLYL+EHK
Sbjct: 361 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKAIGGFEYFISFIDDYSMYGYLYLIEHK 420
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+KFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 421 SEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 480
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMV SMMSY QLPS FWGYAVET VHILNNVPSK+V ETPFEL
Sbjct: 481 GVSERRNRTLLDMVHSMMSYVQLPSSFWGYAVETAVHILNNVPSKNVFETPFEL 534
BLAST of Cmc10g0281921 vs. NCBI nr
Match:
KAA0065386.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 430.6 bits (1106), Expect = 8.4e-117
Identity = 210/234 (89.74%), Postives = 219/234 (93.59%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNN TYLWHLRLGHINLDQIGRLVKNGLLN+ +DDSLPPCES LE
Sbjct: 182 MFRTANTQNKRQRISPNNGTYLWHLRLGHINLDQIGRLVKNGLLNKLEDDSLPPCESFLE 241
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPF GKGYRAKEPLELIHSDL GPMNVKAR GFEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 242 GKMTKRPFIGKGYRAKEPLELIHSDLYGPMNVKAREGFEYFISFIDDYSRYGYLYLMEHK 301
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+K KEY+ EVENLLS+KIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSA GTPQQN
Sbjct: 302 SEALEKLKEYETEVENLLSEKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSALGTPQQN 361
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMVRSMMSYAQ PS FWGYAVET VHILNNVPSKSVSE PFEL
Sbjct: 362 GVSERRNRTLLDMVRSMMSYAQFPSSFWGYAVETAVHILNNVPSKSVSEPPFEL 415
BLAST of Cmc10g0281921 vs. NCBI nr
Match:
KAA0067938.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 405.2 bits (1040), Expect = 3.8e-109
Identity = 194/209 (92.82%), Postives = 201/209 (96.17%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNNNTYLWHLRL HINLD+IGRLVKNGLLN+ KDDSLPPCESCLE
Sbjct: 299 MFRTANTQNKRQRISPNNNTYLWHLRLDHINLDRIGRLVKNGLLNKLKDDSLPPCESCLE 358
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGK YRAKEPLELIHSDLCGPMNVKARGGFEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 359 GKMTKRPFTGKDYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHK 418
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
EAL+KFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 419 YEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 478
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWG 210
VSE RNRTLLDMVRSMMSYAQLPS FWG
Sbjct: 479 GVSERRNRTLLDMVRSMMSYAQLPSSFWG 507
BLAST of Cmc10g0281921 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 6.8e-45
Identity = 84/203 (41.38%), Postives = 129/203 (63.55%), Query Frame = 0
Query: 22 LWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 81
LWH R+GH++ + L K L++ K ++ PC+ CL GK + F R L+L
Sbjct: 424 LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 483
Query: 82 IHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHKSEALDKFKEYKAEVENLLSKK 141
++SD+CGPM +++ GG +YFV+FIDD SR ++Y+++ K + F+++ A VE +K
Sbjct: 484 VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 543
Query: 142 IKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQNSVSEMRNRTLLDMVRSMMSYA 201
+K L+SD GGEY F++Y HGI + + PGTPQ N V+E NRT+++ VRSM+ A
Sbjct: 544 LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 603
Query: 202 QLPSLFWGYAVETTVHILNNVPS 225
+LP FWG AV+T +++N PS
Sbjct: 604 KLPKSFWGEAVQTACYLINRSPS 626
BLAST of Cmc10g0281921 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 152.1 bits (383), Expect = 7.6e-36
Identity = 84/230 (36.52%), Postives = 127/230 (55.22%), Query Frame = 0
Query: 18 NNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSL--------PPCESCLEGKMTKRPFT 77
NN LWH R GHI+ G+L++ N F D SL CE CL GK + PF
Sbjct: 413 NNFRLWHERFGHIS---DGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFK 472
Query: 78 GKGYRA--KEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHKSEALDKF 137
+ K PL ++HSD+CGP+ YFV F+D ++ Y YL+++KS+ F
Sbjct: 473 QLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMF 532
Query: 138 KEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQNSVSEMRN 197
+++ A+ E + K+ L D G EY+ + + +K GI L+ P TPQ N VSE
Sbjct: 533 QDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMI 592
Query: 198 RTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSV---SETPFEL 235
RT+ + R+M+S A+L FWG AV T +++N +PS+++ S+TP+E+
Sbjct: 593 RTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEM 639
BLAST of Cmc10g0281921 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 72/213 (33.80%), Postives = 121/213 (56.81%), Query Frame = 0
Query: 23 WHLRLGHINLDQIGRLVKNGLLNEFK-DDSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 82
WH RLGH +L + ++ N L L C C K K PF+ + +PLE
Sbjct: 446 WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEY 505
Query: 83 IHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHKSEALDKFKEYKAEVENLLSKK 142
I+SD+ + + + Y+V F+D ++RY +LY ++ KS+ D F +K+ VEN +
Sbjct: 506 IYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 565
Query: 143 IKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQNSVSEMRNRTLLDMVRSMMSYA 202
I L SD GGE++ LR DY+ +HGI S P TP+ N +SE ++R +++M +++S+A
Sbjct: 566 IGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHA 625
Query: 203 QLPSLFWGYAVETTVHILNNVPSKSVS-ETPFE 234
+P +W YA V+++N +P+ + ++PF+
Sbjct: 626 SVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQ 655
BLAST of Cmc10g0281921 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 5.8e-28
Identity = 66/213 (30.99%), Postives = 114/213 (53.52%), Query Frame = 0
Query: 23 WHLRLGHINLDQIGRLVKNGLLNEFK-DDSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 82
WH RLGH + ++ N L+ C CL K K PF+ + PLE
Sbjct: 467 WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 526
Query: 83 IHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHKSEALDKFKEYKAEVENLLSKK 142
I+SD+ + + + Y+V F+D ++RY +LY ++ KS+ + F +K +EN +
Sbjct: 527 IYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTR 586
Query: 143 IKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQNSVSEMRNRTLLDMVRSMMSYA 202
I SD GGE++ L +Y +HGI S P TP+ N +SE ++R +++ +++S+A
Sbjct: 587 IGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHA 646
Query: 203 QLPSLFWGYAVETTVHILNNVPSKSVS-ETPFE 234
+P +W YA V+++N +P+ + E+PF+
Sbjct: 647 SIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 676
BLAST of Cmc10g0281921 vs. ExPASy Swiss-Prot
Match:
Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 4.0e-21
Identity = 70/236 (29.66%), Postives = 115/236 (48.73%), Query Frame = 0
Query: 4 TANTQNKRQRISPNNNTY-LWHLRLGHINLDQIGRLVKNGLLNEFKDDSLP-------PC 63
T N NK + S N Y L H LGH N I + +K + K+ + C
Sbjct: 576 TINNVNKSK--SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQC 635
Query: 64 ESCLEGKMTKRPFTGKGYRAK-----EPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSR 123
CL GK TK KG R K EP + +H+D+ GP++ + YF+SF D+ +R
Sbjct: 636 PDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTR 695
Query: 124 YGYLYLMEHKSE--ALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIE 183
+ ++Y + + E L+ F A ++N + ++ ++Q DRG EY + + GI
Sbjct: 696 FQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGIT 755
Query: 184 SQLSAPGTPQQNSVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPS 225
+ + + + V+E NRTLL+ R+++ + LP+ W AVE + I N++ S
Sbjct: 756 ACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVS 808
BLAST of Cmc10g0281921 vs. ExPASy TrEMBL
Match:
A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)
HSP 1 Score: 456.4 bits (1173), Expect = 6.9e-125
Identity = 220/234 (94.02%), Postives = 227/234 (97.01%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD+IGRLVKNGLLN+ KD SLPPCESCLE
Sbjct: 329 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLE 388
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 389 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHK 448
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+KFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 449 SEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 508
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMVRSMMSYAQLPS FWGYAVET VHILNNVPSKSVSETPFEL
Sbjct: 509 GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFEL 562
BLAST of Cmc10g0281921 vs. ExPASy TrEMBL
Match:
A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)
HSP 1 Score: 447.6 bits (1150), Expect = 3.2e-122
Identity = 216/234 (92.31%), Postives = 224/234 (95.73%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD+IGRLVK+GLLN+ KD SLPPCESCLE
Sbjct: 329 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLE 388
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG FEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 389 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHK 448
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+KFKEYK EVENLLSKKIKI +SDRGGEYMDL FQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 449 SEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQN 508
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMVRSMMSYAQLPS FWGYAVET VHILNNVPSKSVSETPFEL
Sbjct: 509 GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFEL 562
BLAST of Cmc10g0281921 vs. ExPASy TrEMBL
Match:
A0A5D3BNE1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00410 PE=4 SV=1)
HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 212/234 (90.60%), Postives = 222/234 (94.87%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRIS NNNTYLWHLRLGHINLD+IGRLVKNGLLN+ +DDSLPPCESCLE
Sbjct: 301 MFRTANTQNKRQRISSNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLE 360
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKA GGFEYF+SFIDDYS YGYLYL+EHK
Sbjct: 361 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKAIGGFEYFISFIDDYSMYGYLYLIEHK 420
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+KFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 421 SEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 480
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMV SMMSY QLPS FWGYAVET VHILNNVPSK+V ETPFEL
Sbjct: 481 GVSERRNRTLLDMVHSMMSYVQLPSSFWGYAVETAVHILNNVPSKNVFETPFEL 534
BLAST of Cmc10g0281921 vs. ExPASy TrEMBL
Match:
A0A5A7VGC7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00530 PE=4 SV=1)
HSP 1 Score: 430.6 bits (1106), Expect = 4.1e-117
Identity = 210/234 (89.74%), Postives = 219/234 (93.59%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNN TYLWHLRLGHINLDQIGRLVKNGLLN+ +DDSLPPCES LE
Sbjct: 182 MFRTANTQNKRQRISPNNGTYLWHLRLGHINLDQIGRLVKNGLLNKLEDDSLPPCESFLE 241
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPF GKGYRAKEPLELIHSDL GPMNVKAR GFEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 242 GKMTKRPFIGKGYRAKEPLELIHSDLYGPMNVKAREGFEYFISFIDDYSRYGYLYLMEHK 301
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
SEAL+K KEY+ EVENLLS+KIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSA GTPQQN
Sbjct: 302 SEALEKLKEYETEVENLLSEKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSALGTPQQN 361
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWGYAVETTVHILNNVPSKSVSETPFEL 235
VSE RNRTLLDMVRSMMSYAQ PS FWGYAVET VHILNNVPSKSVSE PFEL
Sbjct: 362 GVSERRNRTLLDMVRSMMSYAQFPSSFWGYAVETAVHILNNVPSKSVSEPPFEL 415
BLAST of Cmc10g0281921 vs. ExPASy TrEMBL
Match:
A0A5A7VJG3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001110 PE=4 SV=1)
HSP 1 Score: 405.2 bits (1040), Expect = 1.8e-109
Identity = 194/209 (92.82%), Postives = 201/209 (96.17%), Query Frame = 0
Query: 1 MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLE 60
MFRTANTQNKRQRISPNNNTYLWHLRL HINLD+IGRLVKNGLLN+ KDDSLPPCESCLE
Sbjct: 299 MFRTANTQNKRQRISPNNNTYLWHLRLDHINLDRIGRLVKNGLLNKLKDDSLPPCESCLE 358
Query: 61 GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFVSFIDDYSRYGYLYLMEHK 120
GKMTKRPFTGK YRAKEPLELIHSDLCGPMNVKARGGFEYF+SFIDDYSRYGYLYLMEHK
Sbjct: 359 GKMTKRPFTGKDYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHK 418
Query: 121 SEALDKFKEYKAEVENLLSKKIKILQSDRGGEYMDLRFQDYMIKHGIESQLSAPGTPQQN 180
EAL+KFKEYK EVENLLSKKIKIL+SDRGGEYMDLRFQDYMI+HGI+SQLSAPGTPQQN
Sbjct: 419 YEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 478
Query: 181 SVSEMRNRTLLDMVRSMMSYAQLPSLFWG 210
VSE RNRTLLDMVRSMMSYAQLPS FWG
Sbjct: 479 GVSERRNRTLLDMVRSMMSYAQLPSSFWG 507
BLAST of Cmc10g0281921 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 62.0 bits (149), Expect = 7.3e-10
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0
Query: 18 NNTYLWHLRLGHINLDQIGRLVKNGLLNEFKDDSLPPCESCLEGKMTKRPFTGKGYRAKE 77
+ T LWH RL H++ + LVK G L+ K SL CE C+ GK + F+ + K
Sbjct: 67 DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126
Query: 78 PLELIHSDLCGPMNV 93
PL+ +HSDL G +V
Sbjct: 127 PLDYVHSDLWGAPSV 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0025945.1 | 1.4e-124 | 94.02 | gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... | [more] |
KAA0035907.1 | 6.7e-122 | 92.31 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0060534.1 | 4.8e-120 | 90.60 | gag/pol protein [Cucumis melo var. makuwa] >TYK00774.1 gag/pol protein [Cucumis ... | [more] |
KAA0065386.1 | 8.4e-117 | 89.74 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0067938.1 | 3.8e-109 | 92.82 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 6.8e-45 | 41.38 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 7.6e-36 | 36.52 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 1.9e-31 | 33.80 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 5.8e-28 | 30.99 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q12491 | 4.0e-21 | 29.66 | Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TZD0 | 6.9e-125 | 94.02 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... | [more] |
A0A5A7T2V9 | 3.2e-122 | 92.31 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... | [more] |
A0A5D3BNE1 | 2.3e-120 | 90.60 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G0041... | [more] |
A0A5A7VGC7 | 4.1e-117 | 89.74 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00530... | [more] |
A0A5A7VJG3 | 1.8e-109 | 92.82 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G0011... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00300.1 | 7.3e-10 | 40.00 | Gag-Pol-related retrotransposon family protein | [more] |