Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCAACACCACAGCATGTTTCCATCGACATGAATCAATTCTCTTCTACCCAGGGAGCCTCAGATGGGTTACCCAGGGAGCCTCAGGCTCGCAATAATCTTGGGAAGATAGTTTTTGGGCTTACTTTCCAGGCAGTGCTGGCTCTGTTCATCAGCACACCCACCTCATTTCCTCCACTTTTGATAAATCTCTTTGCAGCGGCTATGTTGATTAGCTTGGCACTTTCACTTGCTGCGCTTTTTCTTCAAACTGCCTTCCCAAGAATCGCGCTTTCGTTCGGCAAGATCGGTGCTATGCTTTCTGCTGTTGGTGCGTGCATCATGGCTAGTCTTCTTCTAAAGCATCAGAATTTCAGTTGGATTCCTTGGCTGGCATGCGGCTTCGCCTTGATGGCCTTCATTCTATCATTCAAGTGA
mRNA sequence
ATGGGATCAACACCACAGCATGTTTCCATCGACATGAATCAATTCTCTTCTACCCAGGGAGCCTCAGATGGGTTACCCAGGGAGCCTCAGGCTCGCAATAATCTTGGGAAGATAGTTTTTGGGCTTACTTTCCAGGCAGTGCTGGCTCTGTTCATCAGCACACCCACCTCATTTCCTCCACTTTTGATAAATCTCTTTGCAGCGGCTATGTTGATTAGCTTGGCACTTTCACTTGCTGCGCTTTTTCTTCAAACTGCCTTCCCAAGAATCGCGCTTTCGTTCGGCAAGATCGGTGCTATGCTTTCTGCTGTTGGTGCGTGCATCATGGCTAGTCTTCTTCTAAAGCATCAGAATTTCAGTTGGATTCCTTGGCTGGCATGCGGCTTCGCCTTGATGGCCTTCATTCTATCATTCAAGTGA
Coding sequence (CDS)
ATGGGATCAACACCACAGCATGTTTCCATCGACATGAATCAATTCTCTTCTACCCAGGGAGCCTCAGATGGGTTACCCAGGGAGCCTCAGGCTCGCAATAATCTTGGGAAGATAGTTTTTGGGCTTACTTTCCAGGCAGTGCTGGCTCTGTTCATCAGCACACCCACCTCATTTCCTCCACTTTTGATAAATCTCTTTGCAGCGGCTATGTTGATTAGCTTGGCACTTTCACTTGCTGCGCTTTTTCTTCAAACTGCCTTCCCAAGAATCGCGCTTTCGTTCGGCAAGATCGGTGCTATGCTTTCTGCTGTTGGTGCGTGCATCATGGCTAGTCTTCTTCTAAAGCATCAGAATTTCAGTTGGATTCCTTGGCTGGCATGCGGCTTCGCCTTGATGGCCTTCATTCTATCATTCAAGTGA
Protein sequence
MGSTPQHVSIDMNQFSSTQGASDGLPREPQARNNLGKIVFGLTFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLSAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK
Homology
BLAST of CmaCh15G008430 vs. ExPASy TrEMBL
Match:
A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.8e-30
Identity = 83/157 (52.87%), Postives = 105/157 (66.88%), Query Frame = 0
Query: 1 MGSTPQHVSIDMNQFSS-------TQGASDGLP-----------REPQARNNLGKIVFGL 60
M S+ Q +SIDMN S +GLP + NN+G + GL
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTILGL 60
Query: 61 TFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLS 120
TFQAVLALFI++ TS PPLL +LF AA+LIS A+S +FLQ FPRIAL F KIGA+++
Sbjct: 61 TFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIA 120
Query: 121 AVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
A+G CI+ASLL+ HQNF+WI WLACGF+LMAF+LSF+
Sbjct: 121 AIGVCILASLLI-HQNFAWISWLACGFSLMAFLLSFR 156
BLAST of CmaCh15G008430 vs. ExPASy TrEMBL
Match:
A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)
HSP 1 Score: 140.2 bits (352), Expect = 6.5e-30
Identity = 73/110 (66.36%), Postives = 92/110 (83.64%), Query Frame = 0
Query: 30 QARNNLGKIVFGLTFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPR 89
+ NN+GK + GLTFQAVLALFI++P S PPLL +LFAAA+LIS A+S A +FLQ FPR
Sbjct: 37 KTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPR 96
Query: 90 IALSFGKIGAMLSAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
IAL F KIGA+++A+G CI+ASLL+ HQNF+WI WLA GF+LMAF+LSF+
Sbjct: 97 IALLFEKIGALIAAIGVCIVASLLI-HQNFAWISWLASGFSLMAFVLSFR 145
BLAST of CmaCh15G008430 vs. ExPASy TrEMBL
Match:
A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 2.2e-25
Identity = 82/164 (50.00%), Postives = 101/164 (61.59%), Query Frame = 0
Query: 1 MGSTPQHVSIDMNQFSS--------------TQGASDGLP------REPQA----RNNLG 60
M ST S+DM+ FSS S+ LP + PQA LG
Sbjct: 1 MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQKLG 60
Query: 61 KIVFGLTFQAVLALFIST-PTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFG 120
KI+ L+FQAVLALFIS+ PTS PPLLI+ FAAA+ IS A+S AALFL +FPR A F
Sbjct: 61 KIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLFE 120
Query: 121 KIGAMLSAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
K+GA+ SA G C +AS LL HQNF+WI W+AC F+++ F LSFK
Sbjct: 121 KVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164
BLAST of CmaCh15G008430 vs. ExPASy TrEMBL
Match:
A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 3.0e-14
Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 0
Query: 1 MGSTPQH-VSIDMNQFSS---------------TQG--ASDGLP-----REPQARNN--L 60
M TP H +S+DMN+ +S T G ASD LP + P N+
Sbjct: 1 MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60
Query: 61 GKIVFGLTFQAVLALFIS-TPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSF 120
G LTFQA++ LF+S P+S PL LFAA ML S S + LQ FP+ A
Sbjct: 61 GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120
Query: 121 GKIGAMLSAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
GA+ +A+G CI+ SLLL + NF+WI WLA G L AFI+SFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLL-YPNFTWICWLAAGLILPAFIISFK 164
BLAST of CmaCh15G008430 vs. ExPASy TrEMBL
Match:
A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 4.3e-13
Identity = 64/159 (40.25%), Postives = 79/159 (49.69%), Query Frame = 0
Query: 5 PQHVSIDMNQF---------------SSTQG--ASDGLP-----REPQARNN--LGKIVF 64
P +S+DMN+ S T G ASD LP + P N+ G
Sbjct: 6 PHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQFGNTFV 65
Query: 65 GLTFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAM 124
FQA+L LF++ P S PP L L ML + S + LQ FP+IA GA+
Sbjct: 66 SSNFQAILGLFLNLPPS-PPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGAL 125
Query: 125 LSAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
L+A+G CIM S LL H N +WI WLACG L AFI SFK
Sbjct: 126 LAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162
BLAST of CmaCh15G008430 vs. NCBI nr
Match:
KAG6579136.1 (hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 255.8 bits (652), Expect = 2.2e-64
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0
Query: 1 MGSTPQHVSIDMNQFSSTQGASDGLPREPQARNNLGKIVFGLTFQAVLALFISTPTSFPP 60
MGSTPQHVSIDMNQFSS QGASDGL REPQARNNLGKIVFGLTFQAVLALFISTPTSFPP
Sbjct: 1 MGSTPQHVSIDMNQFSSIQGASDGLHREPQARNNLGKIVFGLTFQAVLALFISTPTSFPP 60
Query: 61 LLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLSAVGACIMASLLLKHQNFS 120
LLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAML+AVGACIMASLLLKHQNFS
Sbjct: 61 LLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLAAVGACIMASLLLKHQNFS 120
Query: 121 WIPWLACGFALMAFILSFK 140
WIPWLACGFALMAFILSFK
Sbjct: 121 WIPWLACGFALMAFILSFK 139
BLAST of CmaCh15G008430 vs. NCBI nr
Match:
KAG6579139.1 (hypothetical protein SDJN03_23587, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 249.2 bits (635), Expect = 2.1e-62
Identity = 131/139 (94.24%), Postives = 135/139 (97.12%), Query Frame = 0
Query: 1 MGSTPQHVSIDMNQFSSTQGASDGLPREPQARNNLGKIVFGLTFQAVLALFISTPTSFPP 60
MGSTPQHVSI+MNQFSSTQGASDGL REPQARNNLGKIVFGLTFQAVLALFIS PTSFPP
Sbjct: 1 MGSTPQHVSINMNQFSSTQGASDGLHREPQARNNLGKIVFGLTFQAVLALFISRPTSFPP 60
Query: 61 LLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLSAVGACIMASLLLKHQNFS 120
L INLFAAA+LISLALSLAALFLQTAFPRIALSFGKIGAML+AVGACIMASLLLKHQNFS
Sbjct: 61 LFINLFAAALLISLALSLAALFLQTAFPRIALSFGKIGAMLAAVGACIMASLLLKHQNFS 120
Query: 121 WIPWLACGFALMAFILSFK 140
WIPWLACGFA MAF+LSFK
Sbjct: 121 WIPWLACGFAFMAFVLSFK 139
BLAST of CmaCh15G008430 vs. NCBI nr
Match:
KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 211.5 bits (537), Expect = 4.8e-51
Identity = 117/151 (77.48%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 1 MGSTPQHVSIDMNQFSSTQGASDGL------PREP------QARNNLGKIVFGLTFQAVL 60
MGSTPQHVSIDMNQF QGASDGL PR P Q RNNLGKIVFGLTFQAVL
Sbjct: 1 MGSTPQHVSIDMNQFCPIQGASDGLPPTTAMPRPPPPPDSSQTRNNLGKIVFGLTFQAVL 60
Query: 61 ALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLSAVGACI 120
ALFIS PTS PPLL+++FAAAMLIS ALSLAALFLQ A+PRIALS GKIGA+L+A+GAC
Sbjct: 61 ALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLAAIGACT 120
Query: 121 MASLLLKHQNFSWIPWLACGFALMAFILSFK 140
+ S+LLKHQ+FSWIPWLACGFALMAFILSFK
Sbjct: 121 ITSVLLKHQHFSWIPWLACGFALMAFILSFK 151
BLAST of CmaCh15G008430 vs. NCBI nr
Match:
KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])
HSP 1 Score: 141.0 bits (354), Expect = 7.9e-30
Identity = 83/157 (52.87%), Postives = 105/157 (66.88%), Query Frame = 0
Query: 1 MGSTPQHVSIDMNQFSS-------TQGASDGLP-----------REPQARNNLGKIVFGL 60
M S+ Q +SIDMN S +GLP + NN+G + GL
Sbjct: 1 MESSSQQISIDMNHLYSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTILGL 60
Query: 61 TFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLS 120
TFQAVLALFI++ TS PPLL +LF AA+LIS A+S +FLQ FPRIAL F KIGA+++
Sbjct: 61 TFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIA 120
Query: 121 AVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
A+G CI+ASLL+ HQNF+WI WLACGF+LMAF+LSF+
Sbjct: 121 AIGVCILASLLI-HQNFAWISWLACGFSLMAFLLSFR 156
BLAST of CmaCh15G008430 vs. NCBI nr
Match:
KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])
HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 73/110 (66.36%), Postives = 92/110 (83.64%), Query Frame = 0
Query: 30 QARNNLGKIVFGLTFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPR 89
+ NN+GK + GLTFQAVLALFI++P S PPLL +LFAAA+LIS A+S A +FLQ FPR
Sbjct: 37 KTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPR 96
Query: 90 IALSFGKIGAMLSAVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 140
IAL F KIGA+++A+G CI+ASLL+ HQNF+WI WLA GF+LMAF+LSF+
Sbjct: 97 IALLFEKIGALIAAIGVCIVASLLI-HQNFAWISWLASGFSLMAFVLSFR 145
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KJN8 | 3.8e-30 | 52.87 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1 | [more] |
A0A5A7U7U1 | 6.5e-30 | 66.36 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A0A0KJP2 | 2.2e-25 | 50.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1 | [more] |
A0A0A0KQ03 | 3.0e-14 | 41.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1 | [more] |
A0A5D3BEH8 | 4.3e-13 | 40.25 | Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
KAG6579136.1 | 2.2e-64 | 97.84 | hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579139.1 | 2.1e-62 | 94.24 | hypothetical protein SDJN03_23587, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579137.1 | 4.8e-51 | 77.48 | hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN49803.1 | 7.9e-30 | 52.87 | hypothetical protein Csa_004681 [Cucumis sativus] | [more] |
KAA0050246.1 | 1.4e-29 | 66.36 | putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... | [more] |
Match Name | E-value | Identity | Description | |