CmaCh12G012210 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGACTCGGGGAGACGCTGGAATTTGGGAAAACCATCAAACTCTCTTCCACTAATTACACCGACTGAGCTTCAATCTTTCAAAATCCCTTCGGTTCTTGCACTCAGCTTCAATGTTTATAAATACTAAACCGCATTTCAATTCCACTTCAAATCAAATCTTCCCCAATCTTCCCCTGTTTGTTTCATTCAACAGCTAATCTCTGCAGCGTTTTTGGTTTCTTGTTCTTCCGACAATGGCGAAAAATTTATCTCAGGCCTTTCTCGAGAGGAAAAATCTGGCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGGTAATGCTTTGTGATCTTTTTCTTTTTCTGGGATTTCTGCTGAGGAACAAAAACAAAACAAAAAAAAAAAGTAATGGGTATGTAAGGATCTTAGTTTCTGTAGTTTCTCTAGTTCATTGAACATAGTGATTGGTTGAATCATTGTTATAGGGTTTAGATTTGTTTTTTTGAGTTAATGCCTTTCCACTGTTCGACGAAATTACTCAAAGAGGGTTTTGTTCTTTTAACTTAAAGAATGGATTGAAAGTAGGAGGGTTTTCTTCTATTTTTAGTTAATGATTTAAGTAAAAGCTAAAGAGAGACGGGATGTGATCCATGCGCATGTTGATTGGATATATGCTGTGTTTTTTTTTCACTGATTCTATTGTTGATTGATTGGCTGGTGGCCCTGTTGAGGAATATTGGGTGTGAGTGTTCCACATTGGTTAATTTAGTGGAAGATCATGGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGTAATACTCACTTAATTAGTATGAAGCTTTTTGGGAAAGCCCAAAACAAAGTCACGAGAGCTTATGCCCAAAATGGACTATATCATACTATTGTGGAGAGTCGTAATTCGTCTAACAATATGATCCACTTCAGATTTGATGCCATGAAAATTAGTTATGTTGTGTTTCTAATAAATTTAGCTTTTATCATCAACATCTGAAGCTAATGAGTTACGTTTCTTCTTTTCTTGATGAACAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACAGTGAGTTCCCTTCTTCATGAAGCAAACACATATCCTTATCTTTCCTTTTTGGAGAATAATTAATATCACTCATCAGGTTCTTACTTTCCTGCGACAAATTTGACCAAATTAGCTGAAGAACTAGATCATGAACTGATGTAGATTACCTTAAGTGAATGGCTTAACTTAACCCTCAACTGATCTGTTTAGAGGGTTCAATTGCAGGAGTAATATTTGCCTATAATCCAAATAAGACCAAAAGGTTTAAAGTTTACCACACCAGATTAGAATCTAAAATGTTTTGCCCCTTTTCGATCAACTCCGATTGGGGTTGAGGCTCTTCTTGCTGGCGATATAGAGCTAGCTGCTATTGCCATATTTTTCGAATCGAACAATGAAAGAACTTGGTTTTATAGTCCAAGTCCACCGCTAGCAAATATTATCTTCTTTGAGCTTTTCCTTTCCGGCTTCCCCTCAAAGTTTTTAAAATGCTTCTACTAGGAGAAGTTTCCACACCCTTATAAATAATGCTTCGTTCCTGTCTCCACCGGATAACTAGAATTGTTATTGTTTTGCAGTTGGCTAGTGTGAGGATGCTTCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGGTTCAACCTTTTTTGTTTCTCTCTTTGCTCCATGTCATGACATGGTTTCACTTTGATTGGCTTTCTTTACTAAGGAAAAAGGGTTGATTTTTCACTGGCAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGAGTTCTTAACCTTGAAAGATTTGAGGGCAGGCATTGACTAAGCTAGCCATCTCAAGATTTGCTTACTGTTGTTCTTTTAATCTACTTGAACTTTGTTCTATGAAAATCTGTGTAAATCCATTTACTATTTCAATAAATAAAAATGGGTTTTTGGA AAGAGACTCGGGGAGACGCTGGAATTTGGGAAAACCATCAAACTCTCTTCCACTAATTACACCGACTGAGCTTCAATCTTTCAAAATCCCTTCGGTTCTTGCACTCAGCTTCAATGTTTATAAATACTAAACCGCATTTCAATTCCACTTCAAATCAAATCTTCCCCAATCTTCCCCTGTTTGTTTCATTCAACAGCTAATCTCTGCAGCGTTTTTGGTTTCTTGTTCTTCCGACAATGGCGAAAAATTTATCTCAGGCCTTTCTCGAGAGGAAAAATCTGGCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACATTGGCTAGTGTGAGGATGCTTCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGAGTTCTTAACCTTGAAAGATTTGAGGGCAGGCATTGACTAAGCTAGCCATCTCAAGATTTGCTTACTGTTGTTCTTTTAATCTACTTGAACTTTGTTCTATGAAAATCTGTGTAAATCCATTTACTATTTCAATAAATAAAAATGGGTTTTTGGA ATGGCGAAAAATTTATCTCAGGCCTTTCTCGAGAGGAAAAATCTGGCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACATTGGCTAGTGTGAGGATGCTTCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGA MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPWAKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN Homology
BLAST of CmaCh12G012210 vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 4.1e-32 Identity = 80/107 (74.77%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A6J1HQF2 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111465732 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A6J1FBC4 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111443891 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49 Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A0A0LFY1 (Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A5A7V781 (Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00100 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A1S3C6F4 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_022966025.1 (early nodulin-93-like [Cucurbita maxima]) HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_022937499.1 (early nodulin-93-like [Cucurbita moschata]) HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49 Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_023537923.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 202.2 bits (513), Expect = 2.3e-48 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CmaCh12G012210 vs. NCBI nr
Match: KAG6586404.1 (hypothetical protein SDJN03_19137, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021259.1 hypothetical protein SDJN02_17947 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 198.7 bits (504), Expect = 2.6e-47 Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_004139321.1 (early nodulin-93 [Cucumis sativus] >KGN60663.1 hypothetical protein Csa_019393 [Cucumis sativus]) HSP 1 Score: 198.0 bits (502), Expect = 4.4e-47 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of CmaCh12G012210 vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related ) HSP 1 Score: 91.3 bits (225), Expect = 5.4e-19 Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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