CmaCh12G012210 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh12G012210
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionearly nodulin-93-like
LocationCma_Chr12: 9523937 .. 9526040 (+)
RNA-Seq ExpressionCmaCh12G012210
SyntenyCmaCh12G012210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAGACTCGGGGAGACGCTGGAATTTGGGAAAACCATCAAACTCTCTTCCACTAATTACACCGACTGAGCTTCAATCTTTCAAAATCCCTTCGGTTCTTGCACTCAGCTTCAATGTTTATAAATACTAAACCGCATTTCAATTCCACTTCAAATCAAATCTTCCCCAATCTTCCCCTGTTTGTTTCATTCAACAGCTAATCTCTGCAGCGTTTTTGGTTTCTTGTTCTTCCGACAATGGCGAAAAATTTATCTCAGGCCTTTCTCGAGAGGAAAAATCTGGCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGGTAATGCTTTGTGATCTTTTTCTTTTTCTGGGATTTCTGCTGAGGAACAAAAACAAAACAAAAAAAAAAAGTAATGGGTATGTAAGGATCTTAGTTTCTGTAGTTTCTCTAGTTCATTGAACATAGTGATTGGTTGAATCATTGTTATAGGGTTTAGATTTGTTTTTTTGAGTTAATGCCTTTCCACTGTTCGACGAAATTACTCAAAGAGGGTTTTGTTCTTTTAACTTAAAGAATGGATTGAAAGTAGGAGGGTTTTCTTCTATTTTTAGTTAATGATTTAAGTAAAAGCTAAAGAGAGACGGGATGTGATCCATGCGCATGTTGATTGGATATATGCTGTGTTTTTTTTTCACTGATTCTATTGTTGATTGATTGGCTGGTGGCCCTGTTGAGGAATATTGGGTGTGAGTGTTCCACATTGGTTAATTTAGTGGAAGATCATGGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGTAATACTCACTTAATTAGTATGAAGCTTTTTGGGAAAGCCCAAAACAAAGTCACGAGAGCTTATGCCCAAAATGGACTATATCATACTATTGTGGAGAGTCGTAATTCGTCTAACAATATGATCCACTTCAGATTTGATGCCATGAAAATTAGTTATGTTGTGTTTCTAATAAATTTAGCTTTTATCATCAACATCTGAAGCTAATGAGTTACGTTTCTTCTTTTCTTGATGAACAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACAGTGAGTTCCCTTCTTCATGAAGCAAACACATATCCTTATCTTTCCTTTTTGGAGAATAATTAATATCACTCATCAGGTTCTTACTTTCCTGCGACAAATTTGACCAAATTAGCTGAAGAACTAGATCATGAACTGATGTAGATTACCTTAAGTGAATGGCTTAACTTAACCCTCAACTGATCTGTTTAGAGGGTTCAATTGCAGGAGTAATATTTGCCTATAATCCAAATAAGACCAAAAGGTTTAAAGTTTACCACACCAGATTAGAATCTAAAATGTTTTGCCCCTTTTCGATCAACTCCGATTGGGGTTGAGGCTCTTCTTGCTGGCGATATAGAGCTAGCTGCTATTGCCATATTTTTCGAATCGAACAATGAAAGAACTTGGTTTTATAGTCCAAGTCCACCGCTAGCAAATATTATCTTCTTTGAGCTTTTCCTTTCCGGCTTCCCCTCAAAGTTTTTAAAATGCTTCTACTAGGAGAAGTTTCCACACCCTTATAAATAATGCTTCGTTCCTGTCTCCACCGGATAACTAGAATTGTTATTGTTTTGCAGTTGGCTAGTGTGAGGATGCTTCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGGTTCAACCTTTTTTGTTTCTCTCTTTGCTCCATGTCATGACATGGTTTCACTTTGATTGGCTTTCTTTACTAAGGAAAAAGGGTTGATTTTTCACTGGCAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGAGTTCTTAACCTTGAAAGATTTGAGGGCAGGCATTGACTAAGCTAGCCATCTCAAGATTTGCTTACTGTTGTTCTTTTAATCTACTTGAACTTTGTTCTATGAAAATCTGTGTAAATCCATTTACTATTTCAATAAATAAAAATGGGTTTTTGGA

mRNA sequence

AAGAGACTCGGGGAGACGCTGGAATTTGGGAAAACCATCAAACTCTCTTCCACTAATTACACCGACTGAGCTTCAATCTTTCAAAATCCCTTCGGTTCTTGCACTCAGCTTCAATGTTTATAAATACTAAACCGCATTTCAATTCCACTTCAAATCAAATCTTCCCCAATCTTCCCCTGTTTGTTTCATTCAACAGCTAATCTCTGCAGCGTTTTTGGTTTCTTGTTCTTCCGACAATGGCGAAAAATTTATCTCAGGCCTTTCTCGAGAGGAAAAATCTGGCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACATTGGCTAGTGTGAGGATGCTTCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGAGTTCTTAACCTTGAAAGATTTGAGGGCAGGCATTGACTAAGCTAGCCATCTCAAGATTTGCTTACTGTTGTTCTTTTAATCTACTTGAACTTTGTTCTATGAAAATCTGTGTAAATCCATTTACTATTTCAATAAATAAAAATGGGTTTTTGGA

Coding sequence (CDS)

ATGGCGAAAAATTTATCTCAGGCCTTTCTCGAGAGGAAAAATCTGGCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACATTGGCTAGTGTGAGGATGCTTCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGA

Protein sequence

MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPWAKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Homology
BLAST of CmaCh12G012210 vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-32
Identity = 80/107 (74.77%), Postives = 90/107 (84.11%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAK  S   LER +LAS D K+A AKRC+ EGV+AGAKAA +ASVA+AIPTLASVRMLPW
Sbjct: 1   MAKGNSP--LERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEA 108
           A+A+LNHTAQALIIST   AAYFIVADKTVLATAR+NSF Q  N+EA
Sbjct: 61  ARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105

BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A6J1HQF2 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111465732 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW
Sbjct: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A6J1FBC4 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111443891 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A0A0LFY1 (Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKN+ASHDPKVAMAKRCAKEGVIAGAKAAAIAS+ATAIPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNIASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 111

BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A5A7V781 (Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00100 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKNLASHDPKVAMAKRCA+EGVIAGAKAAAIAS+ATAIPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 111

BLAST of CmaCh12G012210 vs. ExPASy TrEMBL
Match: A0A1S3C6F4 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.8e-47
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKNLASHDPKVAMAKRCA+EGVIAGAKAAAIAS+ATAIPT ASVRMLPW
Sbjct: 39  MAKNLAQAFLERKNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTFASVRMLPW 98

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 99  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 149

BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_022966025.1 (early nodulin-93-like [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW
Sbjct: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_022937499.1 (early nodulin-93-like [Cucurbita moschata])

HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_023537923.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.2 bits (513), Expect = 2.3e-48
Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNLSQAF ERKNL SHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW
Sbjct: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

BLAST of CmaCh12G012210 vs. NCBI nr
Match: KAG6586404.1 (hypothetical protein SDJN03_19137, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021259.1 hypothetical protein SDJN02_17947 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 2.6e-47
Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKN+AS DPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNMASRDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSF QNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFNQNPNTEAYELN 111

BLAST of CmaCh12G012210 vs. NCBI nr
Match: XP_004139321.1 (early nodulin-93 [Cucumis sativus] >KGN60663.1 hypothetical protein Csa_019393 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 4.4e-47
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0

Query: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60
           MAKNL+QAFLERKN+ASHDPKVAMAKRCAKEGVIAGAKAAAIAS+ATAIPT ASVRMLPW
Sbjct: 1   MAKNLAQAFLERKNIASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 112
           AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 61  AKAHLNHTAQALIISTVAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 111

BLAST of CmaCh12G012210 vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related )

HSP 1 Score: 91.3 bits (225), Expect = 5.4e-19
Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 0

Query: 21  KVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPWAKAHLNHTAQALIISTVAGA 80
           K+  A+   + G IAGAKAAA+A+VA+AIPT+A+VRM PWAKA+LN+TAQALIIS+ + A
Sbjct: 26  KIHRAETSKQAGAIAGAKAAAVAAVASAIPTVAAVRMFPWAKANLNYTAQALIISSASIA 85

Query: 81  AYFIVADKTVLATARRNSFKQ 102
           A+FI ADKT+L  ARRN+  Q
Sbjct: 86  AFFITADKTILQGARRNTEAQ 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q029214.1e-3274.77Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1HQF21.0e-49100.00early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111465732 PE=4 SV=1[more]
A0A6J1FBC42.3e-4999.10early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111443891 PE=4 SV=1[more]
A0A0A0LFY12.1e-4794.59Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1[more]
A0A5A7V7812.8e-4794.59Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold28... [more]
A0A1S3C6F42.8e-4794.59early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022966025.12.1e-49100.00early nodulin-93-like [Cucurbita maxima][more]
XP_022937499.14.7e-4999.10early nodulin-93-like [Cucurbita moschata][more]
XP_023537923.12.3e-4898.20early nodulin-93-like [Cucurbita pepo subsp. pepo][more]
KAG6586404.12.6e-4796.40hypothetical protein SDJN03_19137, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_004139321.14.4e-4794.59early nodulin-93 [Cucumis sativus] >KGN60663.1 hypothetical protein Csa_019393 [... [more]
Match NameE-valueIdentityDescription
AT5G25940.15.4e-1962.96early nodulin-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005050Early nodulin 93 ENOD93 proteinPFAMPF03386ENOD93coord: 21..98
e-value: 8.8E-39
score: 131.3
IPR005050Early nodulin 93 ENOD93 proteinPANTHERPTHR33605EARLY NODULIN-93coord: 16..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G012210.1CmaCh12G012210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane