CmaCh10G005770 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G005770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr10: 2639060 .. 2641700 (-)
RNA-Seq Expression	CmaCh10G005770
Synteny	CmaCh10G005770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTCTACGACATGGGAGACCCACTTGTGCAATTATGGTGATATTATAAATCATGACGCCACTTGGGGGACATTGAATTCATTTCTTCCAAAACGATGCTGTTTCGAACTGTTTCACCCACTCCAGAGCCCCAAATAAGACAATTGCAAGGGCTTGCTGTTGTTTTCTTAATAGGTATCTCTTATGAAACTATTTTTTATGACTTGGGAAAAATGCTTCATCCATTTCCCATATTTGGGTTTTGCTTTTGATTACAATGAACATCTCTTGTTTATAGTGTGAGATTATCAACTAAGTTCGAATATGTCTTTAACACGATTCTGGTCCAATAATCTTGGTTGCTTGTTAATGTAACAGTTCAAACTCACTGTTAGTAGACTTCTTTTTTGGGTTTCCCCTCGAGCTTGGTCGTTTATGAGTGTAACAGTTCAAGCTAGCAGATTTGTTCTTTTTGAACTTTCCCTTTTGGATTTCCCCTCACGTTGGTTTCTGGTCCTCTTTGTACTTTCCCTTCTAGGTTTTTCCTCAAGATCAGTCGTTTATTAGTGTAACTGTTCAAGGCTACCGTTAGTAGATATTGTCATTTTTAGACTTTCCGTTAGGGAGAAGTTTTCACACCCTCATAAAGAAATCGATGTGTGATCTCATAATTCATCCCTTTTCCTTATAATCCACCAATTTCAGGGTCTAGTGTCTCGTAGTTAGTCAAGCTCACTTGTAAAACAAAATTTTATACCGAATGTTATACCAATACATTTTTTATGTATAGTATCGAGCATTGGCTCCATCTCCAACTCATCTGATAATGAAGCTTCCTTGCTGCCAGGTATGATTTTGTTTTATTTCCTTCTTTTTAATATGTAATTTTTTTTATAATTTAATTTATCCTGTGAACAAATTACAGATGGATGTGGTGGTGCTACTTTCATTTTTTTTCTTAAAATGTATGCTTTTAATTTATTAAACAGAGCTATATCATTATTTTTAATTCCATCGGTCTTTATTAATTGTGAAAACAAAGTAACTTAAGGTCCGGCCCAATAAGCCATTTATACTGTAAGCCCACATAGAGCCAACCCAGCCCAACTTCAAAAATAGCTAGCCTTTTTTTTATTATTAATTTTAAATTGAGACCCAATTAGCTAGCCTTTTTCATTTTTTTTTTATAAGAAAATATTTTAATAACCAAAACATTAATAAACTTATAAATAATTATATATAAAAATTTGCAGATTTGAATGATAAATCAAATTCAAAATTTAAAAAACGTTTCGTTGAAATAAAAGATTGTAGCACATGTTCGATTTTGATTCTTATCTTAACATATTTAATTATTTGGAATTATAATATACAAAAAAATACAAAATACAAAATCACTATTATTATTATTATTTTGGGCAAGTTGCGTGTGAGCAAAAAATAACAATCGAACGCCAGCAAATATACTCGTCGTTTATGGGAGCGCTGAAAATGACACGTGGCGCTATTTGGCTTCTGAAATAATAAAATTTCCAAAAATAACGAAAGTTCTATGCACCCGGCGGTATTTTCATGGTTCACGTGCTTGTCGCATGCGCCAACGGGAAACTTCTAGGAAAACCACTATTCAGGACACGTGTCACATTCGTAGCAGAAAGTTACGGTGAAGCGGCACGTACATGTTAGTATCTCCCAAAGTATGAGGAGATTAAGTTGTAGAAACGTGTCAATCGTACTGTGGTCTAGGAAGGAGGTTACGGAGAAACGGCATCCAGAGGATAATCTCTGAATTTAAAAAGTGAAAAAGAAAATCAAATTTAGATTTTTGTAATTTATGATTTGAAAATATAAAAAGCGTTCGGAGTTGGACTTGCGTGCCTGTCACGAGACCTACCGTTCTCTTGTCGTCTAGCGTTTATTTTCGTCCCTTTTTCAGAATATTTGAAATTATGGAAAATGAATTTGGATTATTTAAAGAATATTTGTGATAATTTTGGCCTTTTTTAATGAGGTCAAAAAGGTCATTTGAATTAGTTTATATTTTCCATTAAATTGATTATTAAAAAAAAAGTAAATAGATAATTAAAAATAAATAAATAAATATATCATCTACTAAAATCGGGTCATGTTGATGATATGTATGTATGTATGTATGTATGTATGTACTTGCTGTAGCCGGCTACGAAAACATGTAACCGAAACAGCCGGTAAAAGTATACTGTCTAGCCCACGCGTCTCTAAACGCCAAATCGCCACGTGTCCGGTCTTATCCGTTCACAGTTTTCCCCCCTTTTAAATCGCTACCAAAGGTAAAGCAAAAAGCAACACATCCATTTCCCACTCCTCTCTGTCTAAAAAAGTACTTTCCGATCATCTCTCTCCAAAATGGCGACTAATCTCTTCACTTTTGCCCCCACCAGCATCCGTGCCTGTGCCTCCTCCGCCGACCACAACCGCCGGAAAACCTCCTCCTCCTCCTCCAATTGGTGGGCCCCGGTCTTCGGATGGTCCTCTGAACCGGACTACATCGACTCCGCCAACAAGTCCAACCCTAAAACTCCAGCCGACGGAGTTTCAAAATCAGATCCAGAGACGAAATCGGCGAGAAATCGATTTTCCCCCGGCTGCTTCACGGAGTCGAAGGCGCGACAACTTCGCCTGA

mRNA sequence

TCGTCTACGACATGGGAGACCCACTTGTGCAATTATGGTGATATTATAAATCATGACGCCACTTGGGGGACATTGAATTCATTTCTTCCAAAACGATGCTGTTTCGAACTGTTTCACCCACTCCAGAGCCCCAAATAAGACAATTGCAAGGGCTTGCTGTTGTTTTCTTAATAGTATCGAGCATTGGCTCCATCTCCAACTCATCTGATAATGAAGCTTCCTTGCTGCCAGGTAAAGCAAAAAGCAACACATCCATTTCCCACTCCTCTCTGTCTAAAAAAGTACTTTCCGATCATCTCTCTCCAAAATGGCGACTAATCTCTTCACTTTTGCCCCCACCAGCATCCGTGCCTGTGCCTCCTCCGCCGACCACAACCGCCGGAAAACCTCCTCCTCCTCCTCCAATTGGTGGGCCCCGGTCTTCGGATGGTCCTCTGAACCGGACTACATCGACTCCGCCAACAAGTCCAACCCTAAAACTCCAGCCGACGGAGTTTCAAAATCAGATCCAGAGACGAAATCGGCGAGAAATCGATTTTCCCCCGGCTGCTTCACGGAGTCGAAGGCGCGACAACTTCGCCTGA

Coding sequence (CDS)

ATGCTGTTTCGAACTGTTTCACCCACTCCAGAGCCCCAAATAAGACAATTGCAAGGGCTTGCTGTTGTTTTCTTAATAGTATCGAGCATTGGCTCCATCTCCAACTCATCTGATAATGAAGCTTCCTTGCTGCCAGGTAAAGCAAAAAGCAACACATCCATTTCCCACTCCTCTCTGTCTAAAAAAGTACTTTCCGATCATCTCTCTCCAAAATGGCGACTAATCTCTTCACTTTTGCCCCCACCAGCATCCGTGCCTGTGCCTCCTCCGCCGACCACAACCGCCGGAAAACCTCCTCCTCCTCCTCCAATTGGTGGGCCCCGGTCTTCGGATGGTCCTCTGAACCGGACTACATCGACTCCGCCAACAAGTCCAACCCTAAAACTCCAGCCGACGGAGTTTCAAAATCAGATCCAGAGACGAAATCGGCGAGAAATCGATTTTCCCCCGGCTGCTTCACGGAGTCGAAGGCGCGACAACTTCGCCTGA

Protein sequence

MLFRTVSPTPEPQIRQLQGLAVVFLIVSSIGSISNSSDNEASLLPGKAKSNTSISHSSLSKKVLSDHLSPKWRLISSLLPPPASVPVPPPPTTTAGKPPPPPPIGGPRSSDGPLNRTTSTPPTSPTLKLQPTEFQNQIQRRNRREIDFPPAASRSRRRDNFA

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh10G005770 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G005770 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G005770 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G005770 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G005770.1	CmaCh10G005770.1	mRNA