CmaCh00G002890 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTGATATAAAAACACACAAAATCGTAAACCCACCAAGTGTTTGTAAAAATTCCCAAGTGAAAAATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCGCCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATTCCAGTTCAAATTCCTCCCATTGACAATTCCACTGACTGCTCAGAGTAATCAAATTAACATTTCCTTTTCCCTTTTCCTTCGCGCCATGAATCTAAAATGCATTTTCAAGGGACAAATTAAAAAGAAAAATGCGTTGGCTATGATATTGGATGCTAATATTTTGGTGTTGGTGTGTATTGGGATGCAGGGTTGAAGGCTTTGAATTTGGAAGTGGCATGTCAAATGAGGTTGGGAATTGCCATCATCAATGATCCCAATCAACATAAACCAAGCCAAAATCCCATATGATGTTCTTAAGTTTCTCTTCGTTTCAAAATAAGATTGAGTCTTGGTCTCAATAATCCTTATTTACTTCTTAATAATACTCTAATAACGATTACCAATAATCATAATTTCATAACCGTTCATCAATTTCTTCCCATTTTAGTATATTTTAAAAATTTC ACTGATATAAAAACACACAAAATCGTAAACCCACCAAGTGTTTGTAAAAATTCCCAAGTGAAAAATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCGCCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATTCCAGTTCAAATTCCTCCCATTGACAATTCCACTGACTGCTCAGAGGTTGAAGGCTTTGAATTTGGAAGTGGCATGTCAAATGAGGTTGGGAATTGCCATCATCAATGATCCCAATCAACATAAACCAAGCCAAAATCCCATATGATGTTCTTAAGTTTCTCTTCGTTTCAAAATAAGATTGAGTCTTGGTCTCAATAATCCTTATTTACTTCTTAATAATACTCTAATAACGATTACCAATAATCATAATTTCATAACCGTTCATCAATTTCTTCCCATTTTAGTATATTTTAAAAATTTC ATGTCAGGAATCTACAATCTCCGCTTGATGATCAGTGCACTAACCTTCATCGCCATGCTTACAAGCTCCATGATGGTCGCGCTGTCTCAGAATGTCGACATGGGAAGCTGCATACTGGTGGCGCAGGAGCTATCGCCATGTTTGAGCTTCATCAAAGGCAGCGACGGAGGGTTTCTTGGAGAGAATCCACCGCCGTCGTGCTGCAGTGGCGTTACTAAGTTGGCCGCCGATGCTAAAACGAAGAACGATAAGGTTGATTTGTGCGAGTGTATCAAGAAGAGTTTGTCGATGATCGGAGCTTATGATCCGAATCGCATTCCTTCGATTCCCGAAGGCTGCGGAATTCCAGTTCAAATTCCTCCCATTGACAATTCCACTGACTGCTCAGAGGTTGAAGGCTTTGAATTTGGAAGTGGCATGTCAAATGAGGTTGGGAATTGCCATCATCAATGA MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTDCSEVEGFEFGSGMSNEVGNCHHQ Homology
BLAST of CmaCh00G002890 vs. ExPASy Swiss-Prot
Match: O04004 (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12 Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of CmaCh00G002890 vs. ExPASy Swiss-Prot
Match: P55958 (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11 Identity = 41/129 (31.78%), Postives = 63/129 (48.84%), Query Frame = 0
BLAST of CmaCh00G002890 vs. ExPASy Swiss-Prot
Match: Q43871 (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare OX=4513 GN=CW18 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11 Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 0
BLAST of CmaCh00G002890 vs. ExPASy Swiss-Prot
Match: Q9ZPW9 (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09 Identity = 35/98 (35.71%), Postives = 49/98 (50.00%), Query Frame = 0
BLAST of CmaCh00G002890 vs. ExPASy Swiss-Prot
Match: A2ZHF1 (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LTP PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.3e-08 Identity = 38/122 (31.15%), Postives = 55/122 (45.08%), Query Frame = 0
BLAST of CmaCh00G002890 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10 Identity = 35/98 (35.71%), Postives = 49/98 (50.00%), Query Frame = 0
BLAST of CmaCh00G002890 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 ) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of CmaCh00G002890 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 ) HSP 1 Score: 51.6 bits (122), Expect = 6.4e-07 Identity = 37/115 (32.17%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of CmaCh00G002890 vs. TAIR 10
Match: AT2G15325.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06 Identity = 25/89 (28.09%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of CmaCh00G002890 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06 Identity = 29/99 (29.29%), Postives = 51/99 (51.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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