Clc09G16325 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G16325
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Reverse transcriptase domain-containing protein
Location	ClcChr09: 25295189 .. 25296291 (-)
RNA-Seq Expression	Clc09G16325
Synteny	Clc09G16325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAGATAAGTTGTCCACTTCTCGCTTGCATTGGAAGGCAGAATATTTGTCCTTTATGTATCTTAGACTTCCACTTGGTGGTTATCTAAAGAAAGCTTCATTTTGGATGCCGATAATTGATAAGATCCATAAGAAATTGGATAGGTGGAATTGGAAATGCTTTAATCTTTTCCAAGGTGGAAGACTAACTTTGTGCAAAGCAGTGTTCAGTGGTTAAAGAGACCCTCCCAAGCATGTGTCTAGGTGCTAGGTGCAGGTCTTGCACCTCGCCATGAAAAAGCCAGGCACACAAAATAAGCTGCACAATGTAGGCACCCGTCTTATGTGAAGCCCCAAGGGCTTTTCTTCATTTTGAAACAAATAATAATAATTAGAATTTTTAACTTTACAAAGCCAAAATACAAAATTCCTTGTGCTTGGCATTTTTTTTTTCACATTCCCATTTCAACTATGTTTTCTCTTTTTTATGTAGTACTTTTATATATGGTGCGCCTATAAAACACGCTTTATTTGCACCTTGCACTTTACCGTGCCTTCAACTTTAAAAAACATGGGCAGTGTTACAAATATTCCCAGTTATTGATTCTTAAAGCCAGCTAAGGTGATTAAGGTTATAGAAAGAATTATTAAAGCTTTCTTTTGGAAAGGTCTTAAAGGGAGTAAGATAAATCATCTGGCTAAATACGATTTGATTTCCAAATCTCAATCAGATGGGGGTGTCGGCTTTGGGGTTTGAAGATTAGAAATCTAGCATTGTTGGCTAAATGATGCTGGAGATACTTTCATGGAGTTGTTTATAAACTTGGTACTGATAGTAGAATTTCTTTTTGGAATGATCCTTGGCTTGAGAATTAGGCTTTGAATTCAAATTTTCTTAGTTTATTCAGAATCTTGTTATTGCCCAATGGTTCAGTTTCTTATCATTGGGATGCAGATACTCAATCATGGACAGCCTCTTTAAGACGAATGTTGGAAGATGAAGAACAGATTTTATTGAGTTCTTTATTGGATAAAAGAGTGGCTTCGCAGCCAGATTGTCGAAGTTGGAGCTTGGACCCTTCTGGAAAATTAATGTTAGCTCCCTTTCCAAGCATTTAG

mRNA sequence

ATGGAAAAAGATAAGTTGTCCACTTCTCGCTTGCATTGGAAGGCAGAATATTTGTCCTTTATGTATCTTAGACTTCCACTTGGTGGTTATCTAAAGAAAGCTTCATTTTGGATGCCGATAATTGATAAGATCCATAAGAAATTGGATAGGTGGAATTGGAAATGCTTTAATCTTTTCCAAGGTGGAAGACTAACTTTGTGCAAAGCAGTGCAGGTCTTGCACCTCGCCATGAAAAAGCCAGGCACACAAAATAAGCTGCACAATCCAGCTAAGGTGATTAAGGTTATAGAAAGAATTATTAAAGCTTTCTTTTGGAAAGGTCTTAAAGGGAGTAAGATAAATCATCTGGCTAAATACGATTTGATTTCCAAATCTCAATCAGATGGGGGTGTCGGCTTTGGGGCTTTGAATTCAAATTTTCTTAGTTTATTCAGAATCTTGTTATTGCCCAATGGTTCAGTTTCTTATCATTGGGATGCAGATACTCAATCATGGACAGCCTCTTTAAGACGAATGTTGGAAGATGAAGAACAGATTTTATTGAGTTCTTTATTGGATAAAAGAGTGGCTTCGCAGCCAGATTGTCGAAGTTGGAGCTTGGACCCTTCTGGAAAATTAATGTTAGCTCCCTTTCCAAGCATTTAG

Coding sequence (CDS)

ATGGAAAAAGATAAGTTGTCCACTTCTCGCTTGCATTGGAAGGCAGAATATTTGTCCTTTATGTATCTTAGACTTCCACTTGGTGGTTATCTAAAGAAAGCTTCATTTTGGATGCCGATAATTGATAAGATCCATAAGAAATTGGATAGGTGGAATTGGAAATGCTTTAATCTTTTCCAAGGTGGAAGACTAACTTTGTGCAAAGCAGTGCAGGTCTTGCACCTCGCCATGAAAAAGCCAGGCACACAAAATAAGCTGCACAATCCAGCTAAGGTGATTAAGGTTATAGAAAGAATTATTAAAGCTTTCTTTTGGAAAGGTCTTAAAGGGAGTAAGATAAATCATCTGGCTAAATACGATTTGATTTCCAAATCTCAATCAGATGGGGGTGTCGGCTTTGGGGCTTTGAATTCAAATTTTCTTAGTTTATTCAGAATCTTGTTATTGCCCAATGGTTCAGTTTCTTATCATTGGGATGCAGATACTCAATCATGGACAGCCTCTTTAAGACGAATGTTGGAAGATGAAGAACAGATTTTATTGAGTTCTTTATTGGATAAAAGAGTGGCTTCGCAGCCAGATTGTCGAAGTTGGAGCTTGGACCCTTCTGGAAAATTAATGTTAGCTCCCTTTCCAAGCATTTAG

Protein sequence

MEKDKLSTSRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTLCKAVQVLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYDLISKSQSDGGVGFGALNSNFLSLFRILLLPNGSVSYHWDADTQSWTASLRRMLEDEEQILLSSLLDKRVASQPDCRSWSLDPSGKLMLAPFPSI

Homology

[Close]

BLAST of Clc09G16325 vs. NCBI nr
Match: TYJ97221.1 (putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27
Identity = 95/271 (35.06%), Postives = 124/271 (45.76%), Query Frame = 0


Query: 7   STSRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTL 66
           +  R+  KAE L  +YL LPLGGY +   FW P+ID+IHKKLDR  WK FN+ +GGR  L
Sbjct: 40  TADRMSCKAENLPIVYLSLPLGGYPQHQDFWQPVIDRIHKKLDR--WKHFNIPRGGRQIL 99

Query: 67  CKAV----QVLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYDLI 126
           C AV    Q  +L+ K         +P      +E+I + FFW+G  GSK+NHL K++L+
Sbjct: 100 CNAVLTSLQTYYLSHK------MWQSP------LEKITRNFFWEGSSGSKLNHLVKWNLV 159

Query: 127 SKSQSDGGVGFGAL---NSNFLS------------------------------------- 186
           S S    G+G GAL   NS  L+                                     
Sbjct: 160 SLSLKGVGLGLGALKTHNSALLAKWGWRFAMEDFSFGRKIICSIHGKEPFDWFTLEKFGN 219

Query: 187 -----------------------LFRILLLPNGSVSYHWDADTQSWTASLRRMLEDEE-- 207
                                  L RI LLP G V+ HWD  T SW+   RR L+D E  
Sbjct: 220 SLRSPWFSISKVWRSVESLALTKLGRIALLPQGLVADHWDFATLSWSLPFRRSLKDAEIV 279

[Close]

BLAST of Clc09G16325 vs. NCBI nr
Match: XP_038880332.1 (uncharacterized protein LOC120071973 [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-25
Identity = 65/148 (43.92%), Postives = 98/148 (66.22%), Query Frame = 0


Query: 1   MEKDKLST--SRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNL 60
           +E++K+ +  ++L+ K ++L  MYL LPLGGY K  SFW P+IDK+  KLD+  W+ FNL
Sbjct: 140 IEENKMLSVAAQLNCKVKHLPLMYLGLPLGGYPKNVSFWQPVIDKLQGKLDK--WRRFNL 199

Query: 61  FQGGRLTLCKAVQ----VLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKIN 120
            +GG+ TLCK+V       +L++           P KV+ ++ER +K FFW+G KG KIN
Sbjct: 200 SRGGKATLCKSVHSNLPTYYLSL--------FLLPEKVLGIMERTMKNFFWEGHKGGKIN 259

Query: 121 HLAKYDLISKSQSDGGVGFGALNSNFLS 143
           HL K++L++K+Q DGG+G G L +  L+
Sbjct: 260 HLVKWELVTKAQEDGGLGLGGLRARNLA 277

[Close]

BLAST of Clc09G16325 vs. NCBI nr
Match: KAA0051398.1 (Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-19
Identity = 61/136 (44.85%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 3   KDKLSTSRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGG 62
           K   + S L+ K E L  +Y  LPLGGY K A FW P++DK  KKL    WK  NL +GG
Sbjct: 720 KTSSAASMLNCKIEKLPLLYQGLPLGGYPKSAHFWQPVLDKEQKKLH--IWKRLNLSRGG 779

Query: 63  RLTLCKAVQVLHLAMKKPGT--QNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYD 122
           RLTLC +V      +  P T   +    P KV    E  ++ F  +G  GSK+NHL K D
Sbjct: 780 RLTLCSSV------LSNPPTYFMSTFLMPYKVSNSTESTMRNFIREGNNGSKLNHLVKLD 839

Query: 123 LISKSQSDGGVGFGAL 137
           L+SKSQ DGG+G   L
Sbjct: 840 LVSKSQGDGGLGLDKL 847

[Close]

BLAST of Clc09G16325 vs. NCBI nr
Match: TYK31262.1 (DENN domain and WD repeat-containing protein SCD1-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 6.3e-18
Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 32  KKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTLCKAVQVLHLAMKKPGTQNKLHNPAK 91
           ++ +FW  +IDKI KK D+  W+ FNL +GGR TLC  V    LA       +    P K
Sbjct: 13  RQVAFWQSVIDKIRKKFDK--WRRFNLPRGGRTTLCNFV----LANLPTCCMSSFAIPDK 72

Query: 92  VIKVIERIIKAFFWKGLKGSKINHLAKYDLISKSQSDGGVGFGALNSNFLSLFRILLLPN 151
           V+  IERII+ F W+G  GS+INHL   D+             AL+     LFRI LLPN
Sbjct: 73  VVSSIERIIRNFLWEG-HGSEINHLWVGDIPL-----------ALSICSPKLFRIALLPN 132

Query: 152 GSVSYHWDADTQSWTASLRRMLEDEEQILLSSLLD 187
           G V+ HWD    SW+    R+LED+E +    +L+
Sbjct: 133 GLVADHWDHLISSWSIIFHRLLEDDEILEYQDMLE 149

[Close]

BLAST of Clc09G16325 vs. NCBI nr
Match: RVW55296.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-16
Identity = 72/230 (31.30%), Postives = 109/230 (47.39%), Query Frame = 0


Query: 11  LHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTLCKAV 70
           L  KA     +YL LPLGG  K + FW P+I++I ++LD W  K +  F GGR+TL ++ 
Sbjct: 2   LDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQ-KAYLSF-GGRITLIQSC 61

Query: 71  QVLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYDLISKSQSDGG 130
            + H+        +    PA V   IER+ + F W G+   K +HL  +D++ K +S GG
Sbjct: 62  -LTHMPCY---FLSLFKIPASVAAKIERMQREFLWSGIGEGKRDHLVNWDVVCKPKSRGG 121

Query: 131 VGFGALNSNFLSLF----------------RILLLPNGSVSYHWDADTQ-------SWTA 190
           +GFG ++   ++L                 +++L   GS S  W+ +          W A
Sbjct: 122 LGFGKISMRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWNVNNNVRWSHRCPWKA 181

Query: 191 ------SLRRMLEDEEQILLSSLLDKRVASQPDCRSWSLDPSGKLMLAPF 212
                 S   +LED E ++ S        S PD RSWS+ PSG   +  F
Sbjct: 182 LHLSSKSFPSLLEDLESLMRSLDRLHISPSVPDKRSWSISPSGLFTVKSF 225

[Close]

BLAST of Clc09G16325 vs. ExPASy TrEMBL
Match: A0A5D3BF26 (Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00080 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.5e-28
Identity = 95/271 (35.06%), Postives = 124/271 (45.76%), Query Frame = 0


Query: 7   STSRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTL 66
           +  R+  KAE L  +YL LPLGGY +   FW P+ID+IHKKLDR  WK FN+ +GGR  L
Sbjct: 40  TADRMSCKAENLPIVYLSLPLGGYPQHQDFWQPVIDRIHKKLDR--WKHFNIPRGGRQIL 99

Query: 67  CKAV----QVLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYDLI 126
           C AV    Q  +L+ K         +P      +E+I + FFW+G  GSK+NHL K++L+
Sbjct: 100 CNAVLTSLQTYYLSHK------MWQSP------LEKITRNFFWEGSSGSKLNHLVKWNLV 159

Query: 127 SKSQSDGGVGFGAL---NSNFLS------------------------------------- 186
           S S    G+G GAL   NS  L+                                     
Sbjct: 160 SLSLKGVGLGLGALKTHNSALLAKWGWRFAMEDFSFGRKIICSIHGKEPFDWFTLEKFGN 219

Query: 187 -----------------------LFRILLLPNGSVSYHWDADTQSWTASLRRMLEDEE-- 207
                                  L RI LLP G V+ HWD  T SW+   RR L+D E  
Sbjct: 220 SLRSPWFSISKVWRSVESLALTKLGRIALLPQGLVADHWDFATLSWSLPFRRSLKDAEIV 279

[Close]

BLAST of Clc09G16325 vs. ExPASy TrEMBL
Match: A0A5A7U808 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001400 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-19
Identity = 61/136 (44.85%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 3   KDKLSTSRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGG 62
           K   + S L+ K E L  +Y  LPLGGY K A FW P++DK  KKL    WK  NL +GG
Sbjct: 720 KTSSAASMLNCKIEKLPLLYQGLPLGGYPKSAHFWQPVLDKEQKKLH--IWKRLNLSRGG 779

Query: 63  RLTLCKAVQVLHLAMKKPGT--QNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYD 122
           RLTLC +V      +  P T   +    P KV    E  ++ F  +G  GSK+NHL K D
Sbjct: 780 RLTLCSSV------LSNPPTYFMSTFLMPYKVSNSTESTMRNFIREGNNGSKLNHLVKLD 839

Query: 123 LISKSQSDGGVGFGAL 137
           L+SKSQ DGG+G   L
Sbjct: 840 LVSKSQGDGGLGLDKL 847

[Close]

BLAST of Clc09G16325 vs. ExPASy TrEMBL
Match: A0A5D3E5T3 (DENN domain and WD repeat-containing protein SCD1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005520 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-18
Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 32  KKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTLCKAVQVLHLAMKKPGTQNKLHNPAK 91
           ++ +FW  +IDKI KK D+  W+ FNL +GGR TLC  V    LA       +    P K
Sbjct: 13  RQVAFWQSVIDKIRKKFDK--WRRFNLPRGGRTTLCNFV----LANLPTCCMSSFAIPDK 72

Query: 92  VIKVIERIIKAFFWKGLKGSKINHLAKYDLISKSQSDGGVGFGALNSNFLSLFRILLLPN 151
           V+  IERII+ F W+G  GS+INHL   D+             AL+     LFRI LLPN
Sbjct: 73  VVSSIERIIRNFLWEG-HGSEINHLWVGDIPL-----------ALSICSPKLFRIALLPN 132

Query: 152 GSVSYHWDADTQSWTASLRRMLEDEEQILLSSLLD 187
           G V+ HWD    SW+    R+LED+E +    +L+
Sbjct: 133 GLVADHWDHLISSWSIIFHRLLEDDEILEYQDMLE 149

[Close]

BLAST of Clc09G16325 vs. ExPASy TrEMBL
Match: A0A438F5X5 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_1210 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.5e-17
Identity = 72/230 (31.30%), Postives = 109/230 (47.39%), Query Frame = 0


Query: 11  LHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNLFQGGRLTLCKAV 70
           L  KA     +YL LPLGG  K + FW P+I++I ++LD W  K +  F GGR+TL ++ 
Sbjct: 2   LDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQ-KAYLSF-GGRITLIQSC 61

Query: 71  QVLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAKYDLISKSQSDGG 130
            + H+        +    PA V   IER+ + F W G+   K +HL  +D++ K +S GG
Sbjct: 62  -LTHMPCY---FLSLFKIPASVAAKIERMQREFLWSGIGEGKRDHLVNWDVVCKPKSRGG 121

Query: 131 VGFGALNSNFLSLF----------------RILLLPNGSVSYHWDADTQ-------SWTA 190
           +GFG ++   ++L                 +++L   GS S  W+ +          W A
Sbjct: 122 LGFGKISMRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWNVNNNVRWSHRCPWKA 181

Query: 191 ------SLRRMLEDEEQILLSSLLDKRVASQPDCRSWSLDPSGKLMLAPF 212
                 S   +LED E ++ S        S PD RSWS+ PSG   +  F
Sbjct: 182 LHLSSKSFPSLLEDLESLMRSLDRLHISPSVPDKRSWSISPSGLFTVKSF 225

[Close]

BLAST of Clc09G16325 vs. ExPASy TrEMBL
Match: A0A438JNC2 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_518 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.7e-16
Identity = 74/246 (30.08%), Postives = 116/246 (47.15%), Query Frame = 0


Query: 1   MEKDKLS--TSRLHWKAEYLSFMYLRLPLGGYLKKASFWMPIIDKIHKKLDRWNWKCFNL 60
           +E++ LS     L  KA     +YL LPLGG  K + FW P+I++I ++LD W  K +  
Sbjct: 195 LEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQ-KTYLS 254

Query: 61  FQGGRLTLCKAVQVLHLAMKKPGTQNKLHNPAKVIKVIERIIKAFFWKGLKGSKINHLAK 120
           F GGR+TL ++  + H+        +    PA V   IER+ + F W G+   K +HL  
Sbjct: 255 F-GGRITLIQSC-LTHMPCY---FLSLFKIPASVAAKIERMQRDFLWSGVGKGKRDHLVN 314

Query: 121 YDLISKSQSDGGVGFGALNSNFLSLF----------------RILLLPNGSVSYHWDADT 180
           +D++ K +S GG+GFG ++   ++L                 +++L   GS S  WD + 
Sbjct: 315 WDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNN 374

Query: 181 -----------------QSWTASLRRMLEDEEQILLSSLLDKRVASQPDCRSWSLDPSGK 212
                            Q ++   R ++ED E ++ S       +S PD RSWSL P G 
Sbjct: 375 IVRWSHRCPWKAIALVYQEFSKFTRFVVEDLEGLMQSFDRLHISSSVPDKRSWSLSPLGL 434

The following BLAST results are available for this feature:

BLAST of Clc09G16325 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97221.1	1.1e-27	35.06	putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. ma...	[more]
XP_038880332.1	1.8e-25	43.92	uncharacterized protein LOC120071973 [Benincasa hispida]	[more]
KAA0051398.1	5.7e-19	44.85	Integrase, catalytic core [Cucumis melo var. makuwa]	[more]
TYK31262.1	6.3e-18	40.65	DENN domain and WD repeat-containing protein SCD1-like [Cucumis melo var. makuwa...	[more]
RVW55296.1	1.5e-16	31.30	putative ribonuclease H protein [Vitis vinifera]	[more]

BLAST of Clc09G16325 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G16325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BF26	5.5e-28	35.06	Putative LRR receptor-like serine/threonine-protein kinase OS=Cucumis melo var. ...	[more]
A0A5A7U808	2.7e-19	44.85	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3E5T3	3.0e-18	40.65	DENN domain and WD repeat-containing protein SCD1-like OS=Cucumis melo var. maku...	[more]
A0A438F5X5	7.5e-17	31.30	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_1210 ...	[more]
A0A438JNC2	3.7e-16	30.08	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_518 P...	[more]

BLAST of Clc09G16325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 17..177
None	No IPR available	PANTHER	PTHR33116:SF33	OS01G0885550 PROTEIN	coord: 17..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G16325.1	Clc09G16325.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003824	catalytic activity