ClCG09G014770 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTGAACGCTACTGTGATTCTTAAATCTCTAAGAGGCTGGATTCAGAAAATCTTGAGGATTTTCGTCCAATTTCTTGTTGTAATGAGTTGTTGTATTAATAAGATTTTGTCTAATAGGTTGCAGGTTTTGGAATTCGTAGTTTGTTAGCGGGAATCAATCTGTTTATGTGCCTAGTGGGAGCATAGTGGATAATGTGGATTGTTATCATCTTAATAGGGGTGTCTCACGTTGTGTCCTAAAGGTTGACATTCGAAAGGCCTATGACTCTGTTAATTAAGATTTCACGTTTGGTGTGTTGCTTGCGGTTGGTAACACTTTGCAATTTGTCAGTTGAATAGTTCGCCTGTGGATTTTGGATTCTATCATCGGTGTGAGTGTATTTAGTTGACTCACTTGTGTTTTGTAGCTGTTCTCTTAATTTTTTTGTGCTGCTGAGAGGGAGTCCTTAGGGTTTATCATGGGATTTATGGGAAATGGGGGTAAGAGCTCAATGTTTGTTTCTGTTGTTAGCCAGGTGGAGGTTGTGGAGTTGGCTAGTAGTAGTATGGGGTTCTCTTGGATTCTCTCGCACTTCGTTATCCAAGTCTTTTAATTTTGTCAAGCTGGTTAAAGTATGTGGATTGCAAGCCTTTGATTGGGAGGATTACTATGCATGTAAATACCTCAGTCTGCTTGAACTCTTTCTTATATATGATGGTCATTAGCAGCCTATCTAGTCTATGATGTAAAGTTTTCATGTTTTTTGGGCTAGTGTGTTTGTACTACCTTCTTGGGTAACACATTGAGTTGGACTGGATTCGTGTGCTTATTTGGGGAGAGGTTCTAATGGTGGTAGGGATCGTGCG TGTGAACGCTACTGTGATTCTTAAATCTCTAAGAGGCTGGATTCAGAAAATCTTGAGGATTTTCGTCCAATTTCTTGTTGTAATGAGTTGTTGTATTAATAAGATTTTGTCTAATAGGTTGCAGTTTGTTAGCGGGAATCAATCTGTTTATGTGCCTAGTGGGAGCATAGTGGATAATGTGGATTGTTATCATCTTAATAGGGGTGTCTCACGTTGTGTCCTAAAGGTTGACATTCGAAAGGCCTATGACTCTAGGGAGTCCTTAGGGTTTATCATGGGATTTATGGGAAATGGGGGTAAGAGCTCAATGTTTGTTTCTGTTGTTAGCCAGGTGGAGGTTGTGGAGTTGGCTAGTAGTAGTATGGGGTTCTCTTGGATTCTCTCGCACTTCGTTATCCAACTGGTTAAAGTATGTGGATTGCAAGCCTTTGATTGGGAGGATTACTATGCATGTAAATACCTCAGTCTGCTTGAACTCTTTCTTATATATGATGTTGGACTGGATTCGTGTGCTTATTTGGGGAGAGGTTCTAATGGTGGTAGGGATCGTGCG ATGAGTTGTTGTATTAATAAGATTTTGTCTAATAGGTTGCAGTTTGTTAGCGGGAATCAATCTGTTTATGTGCCTAGTGGGAGCATAGTGGATAATGTGGATTGTTATCATCTTAATAGGGGTGTCTCACGTTGTGTCCTAAAGGTTGACATTCGAAAGGCCTATGACTCTAGGGAGTCCTTAGGGTTTATCATGGGATTTATGGGAAATGGGGGTAAGAGCTCAATGTTTGTTTCTGTTGTTAGCCAGGTGGAGGTTGTGGAGTTGGCTAGTAGTAGTATGGGGTTCTCTTGGATTCTCTCGCACTTCGTTATCCAACTGGTTAAAGTATGTGGATTGCAAGCCTTTGATTGGGAGGATTACTATGCATGTAAATACCTCAGTCTGCTTGAACTCTTTCTTATATATGATGTTGGACTGGATTCGTGTGCTTATTTGGGGAGAGGTTCTAATGGTGGTAGGGATCGTGCG MSCCINKILSNRLQFVSGNQSVYVPSGSIVDNVDCYHLNRGVSRCVLKVDIRKAYDSRESLGFIMGFMGNGGKSSMFVSVVSQVEVVELASSSMGFSWILSHFVIQLVKVCGLQAFDWEDYYACKYLSLLELFLIYDVGLDSCAYLGRGSNGGRDRA Homology
BLAST of ClCG09G014770 vs. NCBI nr
Match: XP_031737043.1 (uncharacterized protein LOC116402131 [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 7.4e-08 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0
BLAST of ClCG09G014770 vs. NCBI nr
Match: XP_031745730.1 (uncharacterized protein LOC116406187 [Cucumis sativus]) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-07 Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 0
BLAST of ClCG09G014770 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-07 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of ClCG09G014770 vs. NCBI nr
Match: KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-07 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of ClCG09G014770 vs. NCBI nr
Match: KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-07 Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 0
BLAST of ClCG09G014770 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-07 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of ClCG09G014770 vs. ExPASy TrEMBL
Match: A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of ClCG09G014770 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07 Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 0
BLAST of ClCG09G014770 vs. ExPASy TrEMBL
Match: A0A5A7V4C1 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00110 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.0e-07 Identity = 49/119 (41.18%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of ClCG09G014770 vs. ExPASy TrEMBL
Match: A0A5D3DT20 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003080 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.9e-07 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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