Chy1G013310 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAAAAGAAAATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTTGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAACGGGCTAAGTCACCTCGATTTGAATGTTCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACGTGGAGATATTTACAAATGGAACTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTTGAAACCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGATTGCTAAAGATGGTGGAATTTATTTGAAAAACAATCCCGCTAATCGTGATGAATTTGTTCACAAATGGTGGATCGGTAAGTAA ATGGTTAAAAAGAAAATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTTGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAACGGGCTAAGTCACCTCGATTTGAATGTTCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACGTGGAGATATTTACAAATGGAACTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTTGAAACCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGATTGCTAAAGATGGTGGAATTTATTTGAAAAACAATCCCGCTAATCGTGATGAATTTGTTCACAAATGGTGGATCGGTAAGTAA ATGGTTAAAAAGAAAATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTTGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAACGGGCTAAGTCACCTCGATTTGAATGTTCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACGTGGAGATATTTACAAATGGAACTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTTGAAACCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGATTGCTAAAGATGGTGGAATTTATTTGAAAAACAATCCCGCTAATCGTGATGAATTTGTTCACAAATGGTGGATCGGTAAGTAA MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKNNPANRDEFVHKWWIGK* Homology
BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18 Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.8e-18 Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07 Identity = 35/114 (30.70%), Postives = 54/114 (47.37%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07 Identity = 35/141 (24.82%), Postives = 64/141 (45.39%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A1S3CGQ6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500548 PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 5.0e-81 Identity = 137/144 (95.14%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A5A7U5P7 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001430 PE=3 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78 Identity = 132/139 (94.96%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A1S3CG44 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500541 PE=3 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59 Identity = 106/141 (75.18%), Postives = 124/141 (87.94%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A5A7U8F6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001490 PE=3 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 5.0e-57 Identity = 102/136 (75.00%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A5D3C934 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00380 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 9.5e-56 Identity = 101/136 (74.26%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of Chy1G013310 vs. NCBI nr
Match: XP_004139725.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 310 bits (795), Expect = 6.50e-107 Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Chy1G013310 vs. NCBI nr
Match: XP_008462118.1 (PREDICTED: pumilio homolog 15-like [Cucumis melo]) HSP 1 Score: 306 bits (785), Expect = 2.18e-105 Identity = 137/144 (95.14%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Chy1G013310 vs. NCBI nr
Match: XP_031739191.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 305 bits (781), Expect = 8.89e-105 Identity = 135/144 (93.75%), Postives = 140/144 (97.22%), Query Frame = 0
BLAST of Chy1G013310 vs. NCBI nr
Match: KAA0050598.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07842.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (763), Expect = 4.17e-102 Identity = 132/139 (94.96%), Postives = 138/139 (99.28%), Query Frame = 0
BLAST of Chy1G013310 vs. NCBI nr
Match: KAE8646229.1 (hypothetical protein Csa_016318 [Cucumis sativus]) HSP 1 Score: 303 bits (777), Expect = 5.23e-102 Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0
BLAST of Chy1G013310 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 94.4 bits (233), Expect = 8.3e-20 Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 0
BLAST of Chy1G013310 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-19 Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Chy1G013310 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13 Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 0
BLAST of Chy1G013310 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Chy1G013310 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11 Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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