Chy1G013310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy1G013310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	S-protein homolog
Location	chrH01: 17258096 .. 17258530 (+)
RNA-Seq Expression	Chy1G013310
Synteny	Chy1G013310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAAAAGAAAATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTTGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAACGGGCTAAGTCACCTCGATTTGAATGTTCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACGTGGAGATATTTACAAATGGAACTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTTGAAACCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGATTGCTAAAGATGGTGGAATTTATTTGAAAAACAATCCCGCTAATCGTGATGAATTTGTTCACAAATGGTGGATCGGTAAGTAA

mRNA sequence

ATGGTTAAAAAGAAAATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTTGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAACGGGCTAAGTCACCTCGATTTGAATGTTCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACGTGGAGATATTTACAAATGGAACTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTTGAAACCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGATTGCTAAAGATGGTGGAATTTATTTGAAAAACAATCCCGCTAATCGTGATGAATTTGTTCACAAATGGTGGATCGGTAAGTAA

Coding sequence (CDS)

ATGGTTAAAAAGAAAATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTTGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAACGGGCTAAGTCACCTCGATTTGAATGTTCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACGTGGAGATATTTACAAATGGAACTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTTGAAACCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGATTGCTAAAGATGGTGGAATTTATTTGAAAAACAATCCCGCTAATCGTGATGAATTTGTTCACAAATGGTGGATCGGTAAGTAA

Protein sequence

MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKNNPANRDEFVHKWWIGK*

Homology

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BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 0


Query: 10  NVVVLWLATAALVGAQVPSWSVSIVNGLSHLD-LNVHCQSKNDDLGNHHLVKRGDIYKWN 69
           +V+V    T  ++  ++  W V++VNGL+  + L +HC+SK DDLG  +L K  + + WN
Sbjct: 22  HVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWN 81

Query: 70  FKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKN 129
           F EN   +T FWC + K + +++   F    W +  L  RCG +  CIW AK  G+YL N
Sbjct: 82  FGENMLHSTFFWCYMNKDNGHMNVNVF----WDDVILFHRCGWK-NCIWTAKTDGLYLWN 141

Query: 130 NPANRDEFVHKWWIG 144
           + +  D    KW +G
Sbjct: 142 SASGEDVLSRKWEVG 150

[Close]

BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-18
Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 18  TAALVGAQVPSWSVSIVNGLSHLD-LNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGT 77
           T  +V  ++  W V++ NGL+  + L +HC+SK +DLG+ +L K  D + WNF EN   +
Sbjct: 30  TRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHS 89

Query: 78  TLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKNNPANRDEF 137
           TLFWC + K D +++ + F    W +  L  RC  +  C+W AK+ G+YL N+    D  
Sbjct: 90  TLFWCYMSKDDGHMNVKVF----WDDVILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVL 149

Query: 138 VHKWWIG 144
             KW  G
Sbjct: 150 SEKWKSG 150

[Close]

BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 42  LNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWS 101
           L VHC+SKN+D+G  +L K G++  ++FK NFWGTT FWC L K   Y  +         
Sbjct: 40  LKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAI 99

Query: 102 NTWLRDRCGPEGTCIWIAKDGGIY 126
             + +D      +  W+A+D GIY
Sbjct: 100 GLFAKD----GSSYNWLARDDGIY 118

[Close]

BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 35/114 (30.70%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 27  PSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKS 86
           P   +++ N   +L L +HC+SK+DDLG  H+ K G++Y W F  NF  +TL++C    S
Sbjct: 45  PLTRITVKNNNDYL-LGIHCKSKDDDLG-FHIHKEGELYGWKFHVNFQNSTLYFCGF--S 104

Query: 87  DAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKNNPANRDEFVHKW 141
               +   F  +     + R R      C W AK   +Y  +N      +  KW
Sbjct: 105 QGQDNKGVFDIDRAERDFYRCR-----NCTWNAKKDSLYGYSNLPQTVTWFFKW 149

[Close]

BLAST of Chy1G013310 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 35/141 (24.82%), Postives = 64/141 (45.39%), Query Frame = 0


Query: 12  VVLWLATAALVGAQV------------PSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLV 71
           +++++   +L+G +             P   V I N   +L L VHC+S++DD G  H++
Sbjct: 3   IIIFIVLISLIGCETLQHDGKVFPMKGPLTRVVIYNDNDYL-LGVHCKSRDDDHG-FHIL 62

Query: 72  KRGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIA 131
           ++G +Y W F  NF  +TL++C   +          +     ++  R+       C W A
Sbjct: 63  QKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRDSSRCRN-------CTWEA 122

Query: 132 KDGGIYLKNNPANRDEFVHKW 141
           K+ GIY       ++   +KW
Sbjct: 123 KEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A1S3CGQ6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500548 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.0e-81
Identity = 137/144 (95.14%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK 60
           MVKKKMM+RNVVVLWLATAALVGAQVPSWSVSIVN LSHLDLNVHC+SKNDDLGNHHLVK
Sbjct: 1   MVKKKMMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVK 60

Query: 61  RGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAK 120
           RGDIYKW+FKENFWGTTLFWCTLEKSDAYVSFE+FWPESW+NTWLRDRCGPEGTCIW+AK
Sbjct: 61  RGDIYKWSFKENFWGTTLFWCTLEKSDAYVSFESFWPESWTNTWLRDRCGPEGTCIWVAK 120

Query: 121 DGGIYLKNNPANRDEFVHKWWIGK 145
           DGGIYLKNNPANRDEFVHKWWIGK
Sbjct: 121 DGGIYLKNNPANRDEFVHKWWIGK 144

[Close]

BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A5A7U5P7 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001430 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78
Identity = 132/139 (94.96%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 6   MMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 65
           MM+RNVVVLWLATAALVGAQVPSWSVSIVN LSHLDLNVHC+SKNDDLGNHHLVKRGDIY
Sbjct: 1   MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKRGDIY 60

Query: 66  KWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIY 125
           KW+FKENFWGTTLFWCTLEKSDAYVSFE+FWPESW+NTWLRDRCGPEGTCIW+AKDGGIY
Sbjct: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFESFWPESWTNTWLRDRCGPEGTCIWVAKDGGIY 120

Query: 126 LKNNPANRDEFVHKWWIGK 145
           LKNNPANRDEFVHKWWIGK
Sbjct: 121 LKNNPANRDEFVHKWWIGK 139

[Close]

BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A1S3CG44 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500541 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 106/141 (75.18%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK 60
           +VK+KMM+RN++VLWLAT A+VGAQ+P WSV +VNGLS+L L+VHCQS NDDLG H+LV 
Sbjct: 3   IVKRKMMMRNMIVLWLATVAMVGAQLPRWSVRMVNGLSYLGLDVHCQSGNDDLGYHYLVN 62

Query: 61  RGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCG-PEGTCIWIA 120
           RGD +KW+F+ENFWGTTLFWC LEK+DAYVSFE+FWPES  NTWLRDRCG  + TCIWIA
Sbjct: 63  RGDDFKWSFQENFWGTTLFWCRLEKADAYVSFESFWPESLENTWLRDRCGTTQLTCIWIA 122

Query: 121 KDGGIYLKNNPANRDEFVHKW 141
           KD GIYL+NNP N DEFVHKW
Sbjct: 123 KDDGIYLRNNPTNVDEFVHKW 143

[Close]

BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A5A7U8F6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001490 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.0e-57
Identity = 102/136 (75.00%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 6   MMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 65
           MM+RN++VLWLAT A+VGAQ+P WSV +VNGLS+L L+VHCQS NDDLG H+LV RGD +
Sbjct: 1   MMMRNMIVLWLATVAMVGAQLPRWSVRMVNGLSYLGLHVHCQSGNDDLGYHYLVNRGDDF 60

Query: 66  KWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCG-PEGTCIWIAKDGGI 125
           KW+F+ENFWGTTLFWC LEK DAY SFE+FWPES  NTWLRDRCG  + TCIWIAKD GI
Sbjct: 61  KWSFQENFWGTTLFWCRLEKVDAYASFESFWPESLENTWLRDRCGTTQLTCIWIAKDDGI 120

Query: 126 YLKNNPANRDEFVHKW 141
           YL+NNP N DEFVHKW
Sbjct: 121 YLRNNPTNVDEFVHKW 136

[Close]

BLAST of Chy1G013310 vs. ExPASy TrEMBL
Match: A0A5D3C934 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00380 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.5e-56
Identity = 101/136 (74.26%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 6   MMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 65
           MM+RN++VLWLAT A+VGAQ+P WSV +VNGLS+L L+VHCQS NDDLG H+LV RGD +
Sbjct: 1   MMMRNMIVLWLATVAMVGAQLPRWSVRMVNGLSYLGLHVHCQSGNDDLGYHYLVNRGDDF 60

Query: 66  KWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCG-PEGTCIWIAKDGGI 125
           KW+F+ENFWGTTLFWC LEK DAY SFE+FWPES  NTWLRDR G  + TCIWIAKD GI
Sbjct: 61  KWSFQENFWGTTLFWCRLEKVDAYASFESFWPESLENTWLRDRYGTTQLTCIWIAKDDGI 120

Query: 126 YLKNNPANRDEFVHKW 141
           YL+NNP N DEFVHKW
Sbjct: 121 YLRNNPTNVDEFVHKW 136

[Close]

BLAST of Chy1G013310 vs. NCBI nr
Match: XP_004139725.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 310 bits (795), Expect = 6.50e-107
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK 60
           MV+KKMMIRN VVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK
Sbjct: 1   MVQKKMMIRNGVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK 60

Query: 61  RGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAK 120
           RGDIYKWNFKENFWGTTLFWC LEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIW+AK
Sbjct: 61  RGDIYKWNFKENFWGTTLFWCKLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWVAK 120

Query: 121 DGGIYLKNNPANRDEFVHKWWIGK 144
           DGGIYLKNNPANRDEFVHKWWIGK
Sbjct: 121 DGGIYLKNNPANRDEFVHKWWIGK 144

[Close]

BLAST of Chy1G013310 vs. NCBI nr
Match: XP_008462118.1 (PREDICTED: pumilio homolog 15-like [Cucumis melo])

HSP 1 Score: 306 bits (785), Expect = 2.18e-105
Identity = 137/144 (95.14%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK 60
           MVKKKMM+RNVVVLWLATAALVGAQVPSWSVSIVN LSHLDLNVHC+SKNDDLGNHHLVK
Sbjct: 1   MVKKKMMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVK 60

Query: 61  RGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAK 120
           RGDIYKW+FKENFWGTTLFWCTLEKSDAYVSFE+FWPESW+NTWLRDRCGPEGTCIW+AK
Sbjct: 61  RGDIYKWSFKENFWGTTLFWCTLEKSDAYVSFESFWPESWTNTWLRDRCGPEGTCIWVAK 120

Query: 121 DGGIYLKNNPANRDEFVHKWWIGK 144
           DGGIYLKNNPANRDEFVHKWWIGK
Sbjct: 121 DGGIYLKNNPANRDEFVHKWWIGK 144

[Close]

BLAST of Chy1G013310 vs. NCBI nr
Match: XP_031739191.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 8.89e-105
Identity = 135/144 (93.75%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MVKKKMMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVK 60
           MVK+KMMIRNVVVLWLATAALVGAQVPSWSVSI+NGLSHLDLNVHCQSKNDDLGNHHLVK
Sbjct: 1   MVKRKMMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVK 60

Query: 61  RGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAK 120
            GD YKW+FKENFWGTTLFWCTLEKSDAYVSFE FWPESWSNTWLRDRCGPE TCIW+AK
Sbjct: 61  HGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAK 120

Query: 121 DGGIYLKNNPANRDEFVHKWWIGK 144
           DGGIYLKNNPANRDEF+HKWWIGK
Sbjct: 121 DGGIYLKNNPANRDEFIHKWWIGK 144

[Close]

BLAST of Chy1G013310 vs. NCBI nr
Match: KAA0050598.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07842.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (763), Expect = 4.17e-102
Identity = 132/139 (94.96%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 6   MMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 65
           MM+RNVVVLWLATAALVGAQVPSWSVSIVN LSHLDLNVHC+SKNDDLGNHHLVKRGDIY
Sbjct: 1   MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKRGDIY 60

Query: 66  KWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIY 125
           KW+FKENFWGTTLFWCTLEKSDAYVSFE+FWPESW+NTWLRDRCGPEGTCIW+AKDGGIY
Sbjct: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFESFWPESWTNTWLRDRCGPEGTCIWVAKDGGIY 120

Query: 126 LKNNPANRDEFVHKWWIGK 144
           LKNNPANRDEFVHKWWIGK
Sbjct: 121 LKNNPANRDEFVHKWWIGK 139

[Close]

BLAST of Chy1G013310 vs. NCBI nr
Match: KAE8646229.1 (hypothetical protein Csa_016318 [Cucumis sativus])

HSP 1 Score: 303 bits (777), Expect = 5.23e-102
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 6   MMIRNVVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 65
           MMIRN VVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY
Sbjct: 1   MMIRNGVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 60

Query: 66  KWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIY 125
           KWNFKENFWGTTLFWC LEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIW+AKDGGIY
Sbjct: 61  KWNFKENFWGTTLFWCKLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWVAKDGGIY 120

Query: 126 LKNNPANRDEFVHKWWIGK 144
           LKNNPANRDEFVHKWWIGK
Sbjct: 121 LKNNPANRDEFVHKWWIGK 139

[Close]

BLAST of Chy1G013310 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-20
Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 0


Query: 10  NVVVLWLATAALVGAQVPSWSVSIVNGLSHLD-LNVHCQSKNDDLGNHHLVKRGDIYKWN 69
           +V+V    T  ++  ++  W V++VNGL+  + L +HC+SK DDLG  +L K  + + WN
Sbjct: 22  HVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWN 81

Query: 70  FKENFWGTTLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKN 129
           F EN   +T FWC + K + +++   F    W +  L  RCG +  CIW AK  G+YL N
Sbjct: 82  FGENMLHSTFFWCYMNKDNGHMNVNVF----WDDVILFHRCGWK-NCIWTAKTDGLYLWN 141

Query: 130 NPANRDEFVHKWWIG 144
           + +  D    KW +G
Sbjct: 142 SASGEDVLSRKWEVG 150

[Close]

BLAST of Chy1G013310 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 92.0 bits (227), Expect = 4.1e-19
Identity = 47/127 (37.01%), Postives = 72/127 (56.69%), Query Frame = 0


Query: 18  TAALVGAQVPSWSVSIVNGLSHLD-LNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGT 77
           T  +V  ++  W V++ NGL+  + L +HC+SK +DLG+ +L K  D + WNF EN   +
Sbjct: 30  TRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHS 89

Query: 78  TLFWCTLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKNNPANRDEF 137
           TLFWC + K D +++ + F    W +  L  RC  +  C+W AK+ G+YL N+    D  
Sbjct: 90  TLFWCYMSKDDGHMNVKVF----WDDVILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVL 149

Query: 138 VHKWWIG 144
             KW  G
Sbjct: 150 SEKWKSG 150

[Close]

BLAST of Chy1G013310 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13
Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 39  HLDLNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPE 98
           H DL V C+S   D+G H+ VK G IY+++ ++NFW TTLFWCT      Y + + F   
Sbjct: 38  HSDLFVQCKSGKADMGKHY-VKYGKIYQFDIRDNFWKTTLFWCTFRHGPDYRTGQQFDVY 97

Query: 99  SWSNTWLRDRCGPEGTCIWIAKDGGIYLKNNPANRDEFVHKW 141
            +     +      GT  W A++ GIY + N     + VH W
Sbjct: 98  EY-----KPGVAQGGTYEWTAREDGIYFRLNQGTIHK-VHNW 132

[Close]

BLAST of Chy1G013310 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 42  LNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKSDAYVSFETFWPESWS 101
           L VHC+SKN+D+G  +L K G++  ++FK NFWGTT FWC L K   Y  +         
Sbjct: 40  LKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAI 99

Query: 102 NTWLRDRCGPEGTCIWIAKDGGIY 126
             + +D      +  W+A+D GIY
Sbjct: 100 GLFAKD----GSSYNWLARDDGIY 118

[Close]

BLAST of Chy1G013310 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 31  VSIVNGLSHLD-LNVHCQSKNDDLGNHHLVKRGDIYKWNFKENFWGTTLFWCTLEKSD-- 90
           V + N L H   L VHC+SK+DDLG  H++K G  Y++ F +N W TT F C +++    
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 88

Query: 91  ----AYVSFETFWPESWSNTWLRDRCGPEGTCIWIAKDGGIYLKNN 130
                +V++ET W ++            E +C WI ++ GIY   +
Sbjct: 89  KHHLDFVAYETSWSKAL-----------EASCKWIGREDGIYFSQD 122

The following BLAST results are available for this feature:

BLAST of Chy1G013310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.2e-18	36.30	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	5.8e-18	37.01	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	2.6e-10	39.29	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
Q9FI84	1.2e-07	30.70	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F2Q9V4	1.2e-07	24.82	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of Chy1G013310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGQ6	5.0e-81	95.14	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500548 PE=3 SV=1	[more]
A0A5A7U5P7	1.8e-78	94.96	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A1S3CG44	1.4e-59	75.18	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500541 PE=3 SV=1	[more]
A0A5A7U8F6	5.0e-57	75.00	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00...	[more]
A0A5D3C934	9.5e-56	74.26	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]

BLAST of Chy1G013310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139725.1	6.50e-107	97.22	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_008462118.1	2.18e-105	95.14	PREDICTED: pumilio homolog 15-like [Cucumis melo]	[more]
XP_031739191.1	8.89e-105	93.75	S-protein homolog 1-like [Cucumis sativus]	[more]
KAA0050598.1	4.17e-102	94.96	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07842.1 pumilio-like...	[more]
KAE8646229.1	5.23e-102	97.84	hypothetical protein Csa_016318 [Cucumis sativus]	[more]

BLAST of Chy1G013310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	8.3e-20	36.30	S-protein homologue 1	[more]
AT4G29035.1	4.1e-19	37.01	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	5.7e-13	36.27	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	1.8e-11	39.29	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.1e-11	33.96	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 31..140 e-value: 1.0E-24 score: 87.0
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 22..139
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 22..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy1G013310.1	Chy1G013310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region