CcUC08G155640 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATGTCGCCTAATAAGCCTTTTTGCTTTTGTGATAGTGAGCTGCCGAGCAAAAGGTGAGAATTCAGCATCAGTGTCACTCCAGTCACCTTGGAAATCATTGTCAGCTTCACCCCTCATTGTGCGCAAGACAAATGCTTTGGCCTTGCGACGCTGATTGTTGAAGAGACCCCTGATGGAAGTAACAAATCCATCTCCAGCCCCATCACTTGGCCGCTTAAGCCAGGTTATTGGATGTTGATCGGATTTCCCTGCCAGACCCCCTTCATTGTCACTTAAATTAAAGTCGCTGTCAGGAACAACCGTATTGTTGGGTTCCTTTTGACTATGTGCTTTGTCTTTGAACTTCTTACCCTGCGTCCGTGGTGTTTAAGATTTTAAATAACTGACTTAATAATCCAGAAACTCGAATTCAACTCGGTTCAGTTGAATGCAAAAACATAATACATTCAACTTTACTTCCTCTCTAAAAGCTTAGTTTGAGTTTTTATCATAACCAAGCAATGCTTTGGTGACTTGCAAGCTGAGAAATTCGAGGGTGAAGGTAACAAATGCGAACTAAAATGTTGGGAAGGAACAAGAGACGAGGTTGTTACTGGAATATAAAATGTGTGACATTAGTGTTATAATGCAGAGGATCAGATCTAAAAGTTCACCTGCATTCCTGTAACAGACTTTAGAACTCCCCAGATGATATGCTTTTTAACTCGAGAAAATAGCCTACGCCAAGTCCCAGTGAACTCAACACGATGGAATGTATCCATCAGCAGCTTCAGATCATTGACGACAAATCTTGATCCTTCGTAAGTTACTAACAACTCAACCTGTTTCAAAACTTCATTGAGTGATTTACGGAGGAATCTACAAAATACTGTTTCAACAATTAATTCAACAACAAAGCTTACAGACTGAGCTAGCTAACCTGGCTTATCTTGATATTGTGGAACTCCATCATCTTTCGAGGTCTGGATCTTTTCTCATCCTGGGGCTTTATCCCCTTCTTCTCTTCATGGGATGAGCGACCAGCTTTGATAGCTTTGGGATCTTTCAATTTATTACTACCTGATTCATCTGGTTGCTCAACAGAACCCAGTGGTCCACTTTTGGTAATGCTCTGCAAGACAAGCTCAGTAGCAACAGATTCGGCCACAGTCTCTTCCCATGACCTATCAAAGGAAGATGTTCTTCTTAACTCGGGAACTGAGCTGCTGCCAGAATTAGATTTAAGGTTTTGTGTCTTTGATGCCTGCATTGAAAGTATCCGAGACATCATGAGAAATGGAGCATGATCCAAAGGAGCAATATAGCTCATATTTGATCAGTTTCAGAGATCTCAACAGGAGAAACCAACGATCATAACTCCAGCAGTTCCATCCTTCTAAATGTAAAAGAAATCACCCAATCTTTCCTCTTCTTCTTTATTTACTATTATCAGAAAAGAAAACTGGCCCCATGAGCCATAAGTAAGGTTAATAAACTCACCTGAGCAGATTCTGCGTTGACAGATCCTTGACCACCGAGGGAGAAACCTAATTTGGAAAACATCTCCGACTCTTTTGTGTTAGATGCAGATACTTCATGAACTGAAGAACCTTTCCTTACACGCCTTGAACCTGCAGCCGTAGAAATCTTCCATGCTTCCTGTAGCAAAACGTGAGCCACTCAAAATCTATACTTGTGGGAAGCTAAAAAAATAGAAGGTTGCCTTCCACTGAGGAGTTGGCTCCCTTTAGAAACAAAGCTTTTCAACTAACCTGCCGTCTCTGTGAATCTTGTTCTTCCTCTGGAAAAAGGTACTCCCACATCATCCGATACATTGTCTCAGTCAAGTGAATTTTGAGGGGATAAATATCAACCTATAAGAGTAGAATAACACATTAAGCAAACAATCATGCACGAAGAATTAGGAAAAAGAAATTAAAGTGATCAAGATAATTCTGCTTCATGAATATTTTTGGTGAAAAGAAAAACTACAATATTATTTTTAACTGTTAAAGTCTAGTTCATGCAACACATGCACCGGATAAAGTCAGTATCAATTCCTTGTAGGACTTACTGTCTTAGAATTATTCGTCTGACAAATCCATTTCAGGACTTGCTCATCTTCAAGGTGCACTTTTATTTTTCTTTATTTATGTCGAGGAGCACAAGGAAGAATTCAAGATTAAGATAAAAACTAGGCTGTAAAATACACAAATTCACTGTGAAGGAAAAATAAAGAAGGGAAAAAAAAAAGGAAAAGAAAAGAAAAGAGAATGAATTGCTGCAACCCATCCACACCCCCTATGCAACTATAGTTCATTATATGATCTTCCATAAAGCTAATGGATCATAGACTCGACCTCCCATCTGATAACTGGTTTCCAAAGACAAGAAAAGAAAAAATAAAGACCTTCTTGTTCACCCAAGTTAAATTATGAACAAAAGCTGAAAAGTTCTTATAGTTAGCACTGTGAAATATCTAAATTGACAATGCCATTAAACCAAACATTTCCTTATCAGTTAATAATTCAAAGAATTTTTGGTCCTCGAACTACTGTTCCCTATGGAAGAAATGCACACTATAGCAATTTTTTACTAAATAATACAAATATCTATTACTAAAAAATTTGGAGAAAACAAGGGCACTAACCTGGAACATTTCAAGGAGTGAATTTCCATCTCTAGGAGCTCCCTGTTTTGCATCCACCCGAAGCATGACTAATCTGCAGCCATTAAAGTAGATGCTGTAACCGTCTGAAAACCATATGAAGCAATTAATACCCAAATTTCACAAGGAAAAACAGGAAGCTCATTTTCAAAGGGGAATTATGCCATGTTCAAATATCCAATAGATAACAGAATTGCCAATCCCACTCTTGCATTTAGACTTATTTCTTGAACCAAGTGCATCAGCCTTATGTTCAACCAGAGAGAATCAATAACCCATAAAGGTGCGAGTGAATCTGTTCCAGGTCTTAACATAAAAATGGTAATGCATATGGCCAAGCAATGATTATAAAGAACCACTCAAAATAAGTTAAAAAATTGTATGTTTTGATAAACAGATAATCTGTATACATCTGCCCAAGCAGCTATTAAAAGAAAGAAAAATAAAAATCTCACAAAGCACATATATGAAGAAAATAAAAAAGGGCTCAGATAACTTAAAATATTTGATACATAAATAATTTCTTTCTGATGCTTGTGTGCGTGTGTTATTTTATGAATAGATTTTCTTGTTCAGTGTGCCTAACCCCATTAACTCAGAGGAACCTACACCTGTCTCAAAGCTCAAATGCATCAAGGATTTTTCTTATTGAACTCACTCAAAGTTTCAAAACACGCAATCTCTGCATAGGTGTAAGACCGCATGATTTAGCTAACAGGGCCAACCCTTGGAGGCACACTTTACTATTTTACATATTTTGTGAGGTTGAAAATGATAATCTTGAATCACCAAAACGCATGGATTATATTAGAACTTCAGAAGGACATTAGCATGTGATCCAACGAAAACCAAATACTCAGGGGATAGGGATGTAACCTAGACAGATTTAGACTTTCACCAAGATGCAGGAGAAGCAAATAAAAAGAGCTGAAAAAGTACGTACTTTCCCCATTCTGATGGAGGATTCCATGCAGATAGAAGCATGTCAGACTTGGCATTGGGCAAGCAATTTCGTACAACAAAATACTTTGTGGTAAACTGAGCAATCCCAACATCTTTGTAATCACGGTCAAAATCATAAAACTGTAGTAACAGATGGCAACCACGTATTAACTACAGTAATCAACTACCACCGTAATTGTAGAATTATAAGTAATGAATAGTGTCCAAAAAAAAAAAGTTCAACTGACAAGCATTAGTTTACATAAGTCAAGCAACTTGACTGCAATTTAAAATAAATCGTATTAGCTTTTACTGCTGGGATTTCACGAATCCTTTCATCCTGGTTAATCTGTAAAAATTGAACAATCAAACAACCGTGATATTTCTTGTCTAAAAGGATAACGTGAAACATCTAAACCTAGAAACAATTATATACTAGTCCAGTTTTATTATTACAGAAACGTGAACATGTTTTATTAAACAGAAGCATACAAAAAGGAGATGAGATATCCCACTGCATCAACTAGTCTTCTAGTTGTAACTAACAAAAATTCTTGATAGTAGGGTTTTGAGATAGAAGCTTGCTGAAAGAACGCCTATATAGAGAAGAGCATTTTAAAATTCTTCTACTCTTCTCTACAGCAGTTTTTAAGTTTGGAAGGGGCAGCTGAATAGCGTTTTTGGTATGATTTGTGGGTTTCCTTTGAAATTAGAAGTCTTGATTCCCTCGTTTATTCAAAAGATTTCTACCTCCCACTTTGGTTTGGTCTTCGTCCCTTGGGTTGCTCAGTTTGCACTCTATTGGTTTCTTCAACATACTCAAGGATTATCGTTCTTGGTTGCTCGTTTGTCTCTTGTTTGGCAATAGCTTTTAAGTTCTTGATGATCTTTAGCAGTGGGATATTTATTCTGTTTTTTTTTGGGGGGTGTTAGATTTGCTACTATGGAGATGTTCACGTTGTATTTCATTTGTTTTACTCTGTTTCTCTCCCCTCTTTGAGGGTCTTTGTAACTTCAAGCATTAGAAATGAAGGGCATTTTTAGACTCTCACCATGTCATTTAGTTCAGCTTCTGCAAAAGATTTACCATCAACAAGCATGCTCCAGACTACTTTATCAATTTTCAAAGAAATCCGCATGGCATATGAAGGGCTTTTATTCTTCTCCTTCTCCATCAATCTTATCTGAGCAGCTTTCTGAAGAGCCATCCTCAACGATGCAGATGCCATCTTCC TATGTCGCCTAATAAGCCTTTTTGCTTTTGTGATAGTGAGCTGCCGAGCAAAAGTGTCACTCCAGTCACCTTGGAAATCATTGTCAGCTTCACCCCTCATTGTGCGCAAGACAAATGCTTTGGCCTTGCGACGCTGATTGTTGAAGAGACCCCTGATGGAAGTAACAAATCCATCTCCAGCCCCATCACTTGGCCGCTTAAGCCAGGTCTGGATCTTTTCTCATCCTGGGGCTTTATCCCCTTCTTCTCTTCATGGGATGAGCGACCAGCTTTGATAGCTTTGGGATCTTTCAATTTATTACTACCTGATTCATCTGGTTGCTCAACAGAACCCAGTGGTCCACTTTTGGTAATGCTCTGCAAGACAAGCTCAGTAGCAACAGATTCGGCCACAGTCTCTTCCCATGACCTATCAAAGGAAGATGTTCTTCTTAACTCGGGAACTGAGCTGCTGCCAGAATTAGATTTAAGGTTTTGTGTCTTTGATGCCTGCATTGAAAAGATCTCAACAGGAGAAACCAACGATCATAACTCCAGCAGTTCCATCCTTCTAAATATACTTCATGAACTGAAGAACCTTTCCTTACACGCCTTGAACCTGCAGCCAAGGTTGCCTTCCACTGAGGAGTTGGCTCCCTTTAGAAACAAAGCTTTTCAACTAACCTGCCGTCTCTGTGAATCTTGTTCTTCCTCTGGAAAAAGGTACTCCCACATCATCCGATACATTGTCTCAGTCAAATTTCTACCTCCCACTTTGGTTTGGTCTTCGTCCCTTGGGTTGCTCAGTTTGCACTCTATTGGTTTCTTCAACATACTCAAGGATTATCGTTCTTGGTTGCTCCTTCTGCAAAAGATTTACCATCAACAAGCATGCTCCAGACTACTTTATCAATTTTCAAAGAAATCCGCATGGCATATGAAGGGCTTTTATTCTTCTCCTTCTCCATCAATCTTATCTGAGCAGCTTTCTGAAGAGCCATCCTCAACGATGCAGATGCCATCTTCC ATGTCGCCTAATAAGCCTTTTTGCTTTTGTGATAGTGAGCTGCCGAGCAAAAGTGTCACTCCAGTCACCTTGGAAATCATTGTCAGCTTCACCCCTCATTGTGCGCAAGACAAATGCTTTGGCCTTGCGACGCTGATTGTTGAAGAGACCCCTGATGGAAGTAACAAATCCATCTCCAGCCCCATCACTTGGCCGCTTAAGCCAGGTCTGGATCTTTTCTCATCCTGGGGCTTTATCCCCTTCTTCTCTTCATGGGATGAGCGACCAGCTTTGATAGCTTTGGGATCTTTCAATTTATTACTACCTGATTCATCTGGTTGCTCAACAGAACCCAGTGGTCCACTTTTGGTAATGCTCTGCAAGACAAGCTCAGTAGCAACAGATTCGGCCACAGTCTCTTCCCATGACCTATCAAAGGAAGATGTTCTTCTTAACTCGGGAACTGAGCTGCTGCCAGAATTAGATTTAAGGTTTTGTGTCTTTGATGCCTGCATTGAAAAGATCTCAACAGGAGAAACCAACGATCATAACTCCAGCAGTTCCATCCTTCTAAATATACTTCATGAACTGAAGAACCTTTCCTTACACGCCTTGAACCTGCAGCCAAGGTTGCCTTCCACTGAGGAGTTGGCTCCCTTTAGAAACAAAGCTTTTCAACTAACCTGCCGTCTCTGTGAATCTTGTTCTTCCTCTGGAAAAAGGTACTCCCACATCATCCGATACATTGTCTCAGTCAAATTTCTACCTCCCACTTTGGTTTGGTCTTCGTCCCTTGGGTTGCTCAGTTTGCACTCTATTGGTTTCTTCAACATACTCAAGGATTATCGTTCTTGGTTGCTCCTTCTGCAAAAGATTTACCATCAACAAGCATGCTCCAGACTACTTTATCAATTTTCAAAGAAATCCGCATGGCATATGAAGGGCTTTTATTCTTCTCCTTCTCCATCAATCTTATCTGAGCAGCTTTCTGAAGAGCCATCCTCAACGATGCAGATGCCATCTTCC MSPNKPFCFCDSELPSKSVTPVTLEIIVSFTPHCAQDKCFGLATLIVEETPDGSNKSISSPITWPLKPGLDLFSSWGFIPFFSSWDERPALIALGSFNLLLPDSSGCSTEPSGPLLVMLCKTSSVATDSATVSSHDLSKEDVLLNSGTELLPELDLRFCVFDACIEKISTGETNDHNSSSSILLNILHELKNLSLHALNLQPRLPSTEELAPFRNKAFQLTCRLCESCSSSGKRYSHIIRYIVSVKFLPPTLVWSSSLGLLSLHSIGFFNILKDYRSWLLLLQKIYHQQACSRLLYQFSKKSAWHMKGFYSSPSPSILSEQLSEEPSSTMQMPSS Homology
BLAST of CcUC08G155640 vs. NCBI nr
Match: GER37364.1 (vegetative storage protein 1 [Striga asiatica]) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-08 Identity = 57/153 (37.25%), Postives = 78/153 (50.98%), Query Frame = 0
BLAST of CcUC08G155640 vs. ExPASy TrEMBL
Match: A0A5A7PX74 (Vegetative storage protein 1 OS=Striga asiatica OX=4170 GN=STAS_13770 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-08 Identity = 57/153 (37.25%), Postives = 78/153 (50.98%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|