Carg26184 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCATTACTTTTCCCCCATTGCTCTGAAGAACAATCACTCAAAACAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCGTAAGCATTTCACCCTTCTACCTCCAAATTTGTTGCAAAATTAGTATCTCTTCGATGTAGATTATGTAGGACTTATGATCAGTTTTTCCATTTTTAGCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGGTATCTCGATTCTCTTGAGGATTTTGTATTTTCATTTCTCCGACAATTTGTATGTTTATTTTGTTTTTGTTCTTGTTCAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGTAAGTTTACTGAACTAGACATCTTTTGTGGATCTTTTGTGGATCTTTTGTACTCCGTTCTCTGTTGGACTATTTGATATCTTACCTGCATTGGTGCTTGACTGTTGAAGGATACATTTGTTGTTTGTTGTTCATTACTGTAACGGCCAAGTCCACCGCTAGTAGATATTATCTTCCTTGGACTTTCCCTAAAGGTTTTAAAACACACGTCTCGTAGGGGAAGTTTCCACACCCTTATAATCAATGCTTCATTCTCCTCTCCAATTGATGGTGGGATCTCACAATCCACCCTCTTGGGGGCCAGCATCCTCGCTGGCACACCTCCCGGTGTCTGGCTCTGAAACCATTTGTAATGGTCTAAGCCCATTGCTGACAGATATTGTCCTGTTTGGGCTTTTCCTTCCGGGCTTCACCTTAAGGTTTTAAAATGCATATCTCGTAGAGAGAGGTTTCTACACCCTTAGGGATGCTTCGTTCTCCTCTCCAACTGATGTGGGATCTCACCATTACCGCGCATTTTGTGAAATATGGTGGTACTCAGTTCAGTGCATTATTTGGATTGAATTTTCTTTTCTCATGAAATCATATTGGGATAATTGTGCTATGTATACCGCATTTTATTTCTTTTGAGATGGGCTGAGCTAGAGAAATAACTCTTGAGATGTCTAACTTATAATTTGGTGCAAAGCAGAACAGTTTTCTAGATTAATTCTATCCTTCCCCACTATGAGTATCTGTGTAACATTCCTAGCCCAGTAGTAAGAGATTTTGCTAACCGTAGTACCAGGTCAAAGAGCTTGTTATGACTCGCGATTCGTTTTTTGTAGACCCTGGCCTGATGCAAGGCATCCTTATTGACGGGCACACCTTTTTCAATAACTGGAGTGTTATTCTCCCTTCTATGTCCAAGCAATGAGGTTCTGGGAGAGTAAGAAGGATAATAGGAGCATGTTAGAGGAGTTAGACAGCAGGGAAGGAAAGGGAGATGAGAGGTTATTATTAATATTGAATCATAGTCTTAACACTCTCGTTCCATTTGTGTGCGTGAAAATTAGTAAAAGGCTCAACAAGTGATCCTTAATATTAATTGAGAAAAGGAAATTACTAGCTTTTAAACTTATCTTTTGCTCTTATACCCTGTTGGTTGATCATTAGAACATCCAAAAGCTTAAACTGATAGGTTTTGGTATGTTCAATATTTATTCTTATTCTTAATCTGGAGAAGTTATCTTAGTTGGACGTTGGAGAAAGTCATCTTGAATCTAGCCTTTGGGAATAAAGGGCATGTTTATGGCTGGCCTAGCCTATTCCCTCAACATCATGTGGTTAGTTTGATTGGATAGAAATAGATCTTTTCTTGGGTTTATGAAAGACAACTCCAACTCAAAGGAATGACAACAAATATCTCCAATTGGGAAAAAGAGAAGCAAAACTATAAGAATGGAATTATTATGTAATTTACACCAAGAGCTAGGTAGATGACATTATCGAGGAATCTATAATAATCACAATCTTTCCCACAAAAGGCCTTTGATTTTTCCCCAACCAAGTAGACCAAAAGAAGGCCCGAACGTGGTGTTTCCATAGTAGCTCATTCTCTTTCTTAAAAGGATGACCCACGAGAGTATGAGAAAGAAGCACTTTTGGGTCTTTTGGAAGAGCCATGGTCCTGTTGAAGGAGGATAACATTTCGACCCAAATCCTTGATGCCAAAGAAGTGAGTAGGGGTATCCTCCTTTCATTATTTCAAGCACAACAAGTGAGTAGGGGTATCCTCCTACCATTTTTAAGAACAAGTGAGTAAGGGTAGGGGTATGAGGGATTTTCAAGAAACAACATTTCGTTGAAAATAATGAATATTCAAACAAAGAAAGGGGCGTGCAAAAATACTAGCTCCAAAAGATGGTCCATCCTCAACTACGGAGGAACTTACCAATCCATTGTGTCCTAACTGATAGTTATAAAGCTCTCTAGAAACTGAAGCCCACAAAGAGGTTGGAAATTTGACATTTTCTCACACTTCTTCCTCAGATCTCTCACAACCTTTGAAAATTCTACTACCACTCGAGCCATGTACCCCAGAAAACTGCAAAAGACGCATGCCAAATGACCCAAAAATCTCTAGTTTGCATTCCATAGAACTTCCTCCATTATTGAGCAACAATCCCTATTAGTACCTACAAGTCCTAAATGACCCAAAAAAATTGTCCAAAAGCGAGTTGGCAATCTGACAACTCTATAGAAAATTGTTAAGGTACTCAGAACCTGTCTACAATACATAAGGTCCTCCACTGAGTACTCAGCAAGAAGGAAGAAGGCTTCCGATGGCAATCCTCCCCTGTAATACCTGCCACACAAAGAATATTACCTTCTGGTGGATCTTAACCTTCCAGAGAGAGGCAAATAGAAGGGTACCAAGGGGGACGAAGACACAAAGGAGGTGAAAATAAGAAATGCAAGAGGAGGATTGTGCAAGGAGATGCAGCCACAAACAAAGGCTGATCGTAATTGTTGACAGATGCATTAGAAGCGACGTTAGGACACCCTATAGTTTCTCCAGCCTACAGCAAATTGGGCCTTCTTTTCTTTTTGACCCAGGATAGTCTCCTCTGAAAAAAGAGCCTGATTTAACAGATTTATCTGAGCTGCACACGCCCTCTTAGAAATCGAAGGGGACCCACTCTTTGCAGTTTGAAACACTTCACCTGGTTGCTAGAATACACTTGGCTACCTGTCTTAGACGTCAAAATCAACTTCTGAAAGAGCGTCAAAAAAGGAAGGTGAACTTCTGAAAGAGCGTCCAACTAAGATATAAACCATTTTTAGCTGATATTGACATATCTGATAGTTGGGAAAACAAAAGCTAAAATTGAACCCGCTACTGACCAACTCTTCCATTTTTCCAACTGTGAAGACACGAGATAAGAGAATGGAAGCAACTTTATTGAAAGTTTTTCCTGTATTCCTTTTTGCCCAAAAAAAAAAGTATTCTTTCACCCACAAACCTCACAGAAAGGGAATGTGATATCCCCACAGAGCCAATGGGTTATGAAAATAGACTCCCAATGGGCATTAATATGCACGAGGTCATCATTACGGAAGCCTCGAGAGAGGGTGCACCAAGTGGAGTCAAAATTTTTCACAAGATCCCCTAATTCCTCAAGAGTACGCTATTTCCCTTTAGAAGTTCTTTGGTTTCTCTTGAACCAGTCTCCAAAGATTGGCTGTCATGGCGTTGGACCATAAAACAAGAGCCTGCCCTTGAAAGGAGAGCCTTCCAAAAGCCGGTAAGGGGTGGTTTAACAATCTTTTGGGGACACTAGTCTAAGCCAAAAGAATGAAAGAGCTTTGATTTCGATGAACTAGCAGCCATGAAAGGGCCATTGCAAAGATACGTGAGGATGACTCTCTAAATTACTTTTTCACATGATGCATCAGGTAGTGCAAACTGGCATATTTGGGAGTTTCCTTTGGATCCAAGAACTAGTTTTCAATGTTCTTGAATAAAAGATCAAGGGAAAACTTTCATCTTCTTTGGAACCTTGGCCTTTCAAATCACACTGATTTGGAATTAATGAACAACGTGGGAATATCTACCTTCTAGAATCCTGCTGGGTGCTAGGCTGATCGTGGCTGATCAGGTTTTGGAGTCTAATTCAATATCAGACAGATTCCTTCTAAACTGCAATTTCTACGGGTGGGTGTCTTATGACCAGCAATGATTCATGGTGAAGTGCTTTGATTTCGCTACACTGTCAAGTCTTTGGAAGGAAAGTTTGAGAGGGCTACTACCTGTCAGCCCTCTCCCCAGAAAATTTCATCTTCTTAGGAGTGAAATTCCGAAGCTTTGTGAAAAAGGAGATGGATATATAGGCAAATGTTTTCAACTTGGATTATAGCTTAGCTACTTACGACATATGCTTTTGACTAAGAGGTCAGAAATTCAAATTAAGAGGTCAAAAGTTTAAATCTCTCCTTGCAAATATGCGAAAAAGAATATACGGGCAAGTGTTTCTTCCAAATATAGGTTCCACAGAGAATGTATTCTTGTTGTGGTTGTTTGTATAGCCTGGCCTTGTATACTTTATGGTGTTTTTCAGTCGTTACGTTTACTTGACATTTGCATAGAAATCGAACTATTGGCCGTGTTTCAACTCTTTGAAGCCTTGATGTTTTATTTTCTGGATGAATTTAGCATTGATAAGATGATTGATAATAAACTTGATCCTCCTTTTAATCAGGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTTTGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTATTTGGCATTGTGTAAATCACGTTCTACACTTTGATTCTTATAACGAGGTTCTCAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAGTTATCATTTTGTGTTATATAACCATGTTCTAAGTAAACTAGAAACCGATTAAATTATAAATTTGGTCCTTAAACCATTGAAAATTGTCTCTTTTAGTTTTT CCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCATTACTTTTCCCCCATTGCTCTGAAGAACAATCACTCAAAACAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTTTGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTATTTGGCATTGTGTAAATCACGTTCTACACTTTGATTCTTATAACGAGGTTCTCAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAGTTATCATTTTGTGTTATATAACCATGTTCTAAGTAAACTAGAAACCGATTAAATTATAAATTTGGTCCTTAAACCATTGAAAATTGTCTCTTTTAGTTTTT ATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVELGGEPEA Homology
BLAST of Carg26184 vs. NCBI nr
Match: XP_022923346.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata] >KAG6577693.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015735.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 267.3 bits (682), Expect = 6.7e-68 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Carg26184 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]) HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66 Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Carg26184 vs. NCBI nr
Match: XP_023553279.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 258.5 bits (659), Expect = 3.1e-65 Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Carg26184 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]) HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64 Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Carg26184 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 5.0e-63 Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Carg26184 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 5.0e-58 Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A6J1E6K0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431068 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.2e-68 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.0e-66 Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63 Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63 Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62 Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0
BLAST of Carg26184 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 224.9 bits (572), Expect = 3.6e-59 Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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