Carg26184 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg26184
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
LocationCarg_Chr16: 9316497 .. 9321763 (+)
RNA-Seq ExpressionCarg26184
SyntenyCarg26184
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCATTACTTTTCCCCCATTGCTCTGAAGAACAATCACTCAAAACAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCGTAAGCATTTCACCCTTCTACCTCCAAATTTGTTGCAAAATTAGTATCTCTTCGATGTAGATTATGTAGGACTTATGATCAGTTTTTCCATTTTTAGCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGGTATCTCGATTCTCTTGAGGATTTTGTATTTTCATTTCTCCGACAATTTGTATGTTTATTTTGTTTTTGTTCTTGTTCAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGTAAGTTTACTGAACTAGACATCTTTTGTGGATCTTTTGTGGATCTTTTGTACTCCGTTCTCTGTTGGACTATTTGATATCTTACCTGCATTGGTGCTTGACTGTTGAAGGATACATTTGTTGTTTGTTGTTCATTACTGTAACGGCCAAGTCCACCGCTAGTAGATATTATCTTCCTTGGACTTTCCCTAAAGGTTTTAAAACACACGTCTCGTAGGGGAAGTTTCCACACCCTTATAATCAATGCTTCATTCTCCTCTCCAATTGATGGTGGGATCTCACAATCCACCCTCTTGGGGGCCAGCATCCTCGCTGGCACACCTCCCGGTGTCTGGCTCTGAAACCATTTGTAATGGTCTAAGCCCATTGCTGACAGATATTGTCCTGTTTGGGCTTTTCCTTCCGGGCTTCACCTTAAGGTTTTAAAATGCATATCTCGTAGAGAGAGGTTTCTACACCCTTAGGGATGCTTCGTTCTCCTCTCCAACTGATGTGGGATCTCACCATTACCGCGCATTTTGTGAAATATGGTGGTACTCAGTTCAGTGCATTATTTGGATTGAATTTTCTTTTCTCATGAAATCATATTGGGATAATTGTGCTATGTATACCGCATTTTATTTCTTTTGAGATGGGCTGAGCTAGAGAAATAACTCTTGAGATGTCTAACTTATAATTTGGTGCAAAGCAGAACAGTTTTCTAGATTAATTCTATCCTTCCCCACTATGAGTATCTGTGTAACATTCCTAGCCCAGTAGTAAGAGATTTTGCTAACCGTAGTACCAGGTCAAAGAGCTTGTTATGACTCGCGATTCGTTTTTTGTAGACCCTGGCCTGATGCAAGGCATCCTTATTGACGGGCACACCTTTTTCAATAACTGGAGTGTTATTCTCCCTTCTATGTCCAAGCAATGAGGTTCTGGGAGAGTAAGAAGGATAATAGGAGCATGTTAGAGGAGTTAGACAGCAGGGAAGGAAAGGGAGATGAGAGGTTATTATTAATATTGAATCATAGTCTTAACACTCTCGTTCCATTTGTGTGCGTGAAAATTAGTAAAAGGCTCAACAAGTGATCCTTAATATTAATTGAGAAAAGGAAATTACTAGCTTTTAAACTTATCTTTTGCTCTTATACCCTGTTGGTTGATCATTAGAACATCCAAAAGCTTAAACTGATAGGTTTTGGTATGTTCAATATTTATTCTTATTCTTAATCTGGAGAAGTTATCTTAGTTGGACGTTGGAGAAAGTCATCTTGAATCTAGCCTTTGGGAATAAAGGGCATGTTTATGGCTGGCCTAGCCTATTCCCTCAACATCATGTGGTTAGTTTGATTGGATAGAAATAGATCTTTTCTTGGGTTTATGAAAGACAACTCCAACTCAAAGGAATGACAACAAATATCTCCAATTGGGAAAAAGAGAAGCAAAACTATAAGAATGGAATTATTATGTAATTTACACCAAGAGCTAGGTAGATGACATTATCGAGGAATCTATAATAATCACAATCTTTCCCACAAAAGGCCTTTGATTTTTCCCCAACCAAGTAGACCAAAAGAAGGCCCGAACGTGGTGTTTCCATAGTAGCTCATTCTCTTTCTTAAAAGGATGACCCACGAGAGTATGAGAAAGAAGCACTTTTGGGTCTTTTGGAAGAGCCATGGTCCTGTTGAAGGAGGATAACATTTCGACCCAAATCCTTGATGCCAAAGAAGTGAGTAGGGGTATCCTCCTTTCATTATTTCAAGCACAACAAGTGAGTAGGGGTATCCTCCTACCATTTTTAAGAACAAGTGAGTAAGGGTAGGGGTATGAGGGATTTTCAAGAAACAACATTTCGTTGAAAATAATGAATATTCAAACAAAGAAAGGGGCGTGCAAAAATACTAGCTCCAAAAGATGGTCCATCCTCAACTACGGAGGAACTTACCAATCCATTGTGTCCTAACTGATAGTTATAAAGCTCTCTAGAAACTGAAGCCCACAAAGAGGTTGGAAATTTGACATTTTCTCACACTTCTTCCTCAGATCTCTCACAACCTTTGAAAATTCTACTACCACTCGAGCCATGTACCCCAGAAAACTGCAAAAGACGCATGCCAAATGACCCAAAAATCTCTAGTTTGCATTCCATAGAACTTCCTCCATTATTGAGCAACAATCCCTATTAGTACCTACAAGTCCTAAATGACCCAAAAAAATTGTCCAAAAGCGAGTTGGCAATCTGACAACTCTATAGAAAATTGTTAAGGTACTCAGAACCTGTCTACAATACATAAGGTCCTCCACTGAGTACTCAGCAAGAAGGAAGAAGGCTTCCGATGGCAATCCTCCCCTGTAATACCTGCCACACAAAGAATATTACCTTCTGGTGGATCTTAACCTTCCAGAGAGAGGCAAATAGAAGGGTACCAAGGGGGACGAAGACACAAAGGAGGTGAAAATAAGAAATGCAAGAGGAGGATTGTGCAAGGAGATGCAGCCACAAACAAAGGCTGATCGTAATTGTTGACAGATGCATTAGAAGCGACGTTAGGACACCCTATAGTTTCTCCAGCCTACAGCAAATTGGGCCTTCTTTTCTTTTTGACCCAGGATAGTCTCCTCTGAAAAAAGAGCCTGATTTAACAGATTTATCTGAGCTGCACACGCCCTCTTAGAAATCGAAGGGGACCCACTCTTTGCAGTTTGAAACACTTCACCTGGTTGCTAGAATACACTTGGCTACCTGTCTTAGACGTCAAAATCAACTTCTGAAAGAGCGTCAAAAAAGGAAGGTGAACTTCTGAAAGAGCGTCCAACTAAGATATAAACCATTTTTAGCTGATATTGACATATCTGATAGTTGGGAAAACAAAAGCTAAAATTGAACCCGCTACTGACCAACTCTTCCATTTTTCCAACTGTGAAGACACGAGATAAGAGAATGGAAGCAACTTTATTGAAAGTTTTTCCTGTATTCCTTTTTGCCCAAAAAAAAAAGTATTCTTTCACCCACAAACCTCACAGAAAGGGAATGTGATATCCCCACAGAGCCAATGGGTTATGAAAATAGACTCCCAATGGGCATTAATATGCACGAGGTCATCATTACGGAAGCCTCGAGAGAGGGTGCACCAAGTGGAGTCAAAATTTTTCACAAGATCCCCTAATTCCTCAAGAGTACGCTATTTCCCTTTAGAAGTTCTTTGGTTTCTCTTGAACCAGTCTCCAAAGATTGGCTGTCATGGCGTTGGACCATAAAACAAGAGCCTGCCCTTGAAAGGAGAGCCTTCCAAAAGCCGGTAAGGGGTGGTTTAACAATCTTTTGGGGACACTAGTCTAAGCCAAAAGAATGAAAGAGCTTTGATTTCGATGAACTAGCAGCCATGAAAGGGCCATTGCAAAGATACGTGAGGATGACTCTCTAAATTACTTTTTCACATGATGCATCAGGTAGTGCAAACTGGCATATTTGGGAGTTTCCTTTGGATCCAAGAACTAGTTTTCAATGTTCTTGAATAAAAGATCAAGGGAAAACTTTCATCTTCTTTGGAACCTTGGCCTTTCAAATCACACTGATTTGGAATTAATGAACAACGTGGGAATATCTACCTTCTAGAATCCTGCTGGGTGCTAGGCTGATCGTGGCTGATCAGGTTTTGGAGTCTAATTCAATATCAGACAGATTCCTTCTAAACTGCAATTTCTACGGGTGGGTGTCTTATGACCAGCAATGATTCATGGTGAAGTGCTTTGATTTCGCTACACTGTCAAGTCTTTGGAAGGAAAGTTTGAGAGGGCTACTACCTGTCAGCCCTCTCCCCAGAAAATTTCATCTTCTTAGGAGTGAAATTCCGAAGCTTTGTGAAAAAGGAGATGGATATATAGGCAAATGTTTTCAACTTGGATTATAGCTTAGCTACTTACGACATATGCTTTTGACTAAGAGGTCAGAAATTCAAATTAAGAGGTCAAAAGTTTAAATCTCTCCTTGCAAATATGCGAAAAAGAATATACGGGCAAGTGTTTCTTCCAAATATAGGTTCCACAGAGAATGTATTCTTGTTGTGGTTGTTTGTATAGCCTGGCCTTGTATACTTTATGGTGTTTTTCAGTCGTTACGTTTACTTGACATTTGCATAGAAATCGAACTATTGGCCGTGTTTCAACTCTTTGAAGCCTTGATGTTTTATTTTCTGGATGAATTTAGCATTGATAAGATGATTGATAATAAACTTGATCCTCCTTTTAATCAGGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTTTGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTATTTGGCATTGTGTAAATCACGTTCTACACTTTGATTCTTATAACGAGGTTCTCAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAGTTATCATTTTGTGTTATATAACCATGTTCTAAGTAAACTAGAAACCGATTAAATTATAAATTTGGTCCTTAAACCATTGAAAATTGTCTCTTTTAGTTTTT

mRNA sequence

CCAAAATTAATTGTAAATTCTGATAACAAAGAAACCAAGGGCATTACTTTTCCCCCATTGCTCTGAAGAACAATCACTCAAAACAAGAACGGACGACGATCTTGGAATTTTGAAGAGGGAAAAATCTCCGAAAATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGGCGGCCTCACGCTGAATGGACCCTTTTGGTACTGTTTCTTTTCAGATACAAATCGTTGTTGAATTATATGCCTTTGGAATTTGCTTTGCATCAAAATAAATGGATTTTGTTGCCTGTTCTGAAATCTCTATTTGGCATTGTGTAAATCACGTTCTACACTTTGATTCTTATAACGAGGTTCTCAAGACTTCTTGCCATCAATGATGGATAATGAATGATTCAATAAGTTATCATTTTGTGTTATATAACCATGTTCTAAGTAAACTAGAAACCGATTAAATTATAAATTTGGTCCTTAAACCATTGAAAATTGTCTCTTTTAGTTTTT

Coding sequence (CDS)

ATGGCAGGCAGGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGAGTTGTTGCTCGCTCAATTGATTCGTCTCTTCGACGTCGCTCCGGCATGGGCCTTCCTGTTGGCAAACACATCGTCCCCAATAAACCCCTTCCTGTGAACGATGAACTGGTATGGGACAATGGAACGCCTTTTCCCGAGCCTTGTATTGATCGTATTGCTGATACGGTTGGGAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTCTGGCTGTGTGGAACGACAAAGCGTCTAAGATACCATTTGCGCCGAAAGTATATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

Protein sequence

MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVELGGEPEA
Homology
[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_022923346.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata] >KAG6577693.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015735.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 6.7e-68
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGSRILGGNGVVARSIDSSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_023553279.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.5 bits (659), Expect = 3.1e-65
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGS ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGS-ILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGF+AVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFMAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 126

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 122/127 (96.06%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNL SRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLSSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.0e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Carg26184 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.0e-58
Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLS + SRI+GGNGVVARS+ SSLR+R+GMGLPVGKHIVP+KPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

[Close]
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A6J1E6K0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431068 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.2e-68
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.0e-66
Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGSRILGGNGVVARSIDSSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGEPEA
Sbjct: 121 LGGEPEA 127

[Close]
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAG+L+NLGS+ILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGG+PEA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Carg26184 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLSNLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEPEA 128
           LGGE EA
Sbjct: 121 LGGEAEA 127

[Close]
BLAST of Carg26184 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 224.9 bits (572), Expect = 3.6e-59
Identity = 105/125 (84.00%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60
           MAGRLS + SRI+GGNGVVARS+ SSLR+R+GMGLPVGKHIVP+KPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGEP 126
           LGGEP
Sbjct: 121 LGGEP 125

The following BLAST results are available for this feature:
BLAST of Carg26184 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923346.16.7e-68100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022965223.12.2e-6698.43NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_023553279.13.1e-6597.64NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_038903151.12.0e-6496.06NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Beni... [more]
XP_004147198.15.0e-6392.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
BLAST of Carg26184 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGK05.0e-5884.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar... [more]
BLAST of Carg26184 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E6K03.2e-68100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1HN931.0e-6698.43NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A0A0L5J82.4e-6392.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1[more]
A0A1S3BK372.4e-6392.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1KTK91.6e-6292.13NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
BLAST of Carg26184 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47570.13.6e-5984.00unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36401:SF2BNAC02G33360D PROTEINcoord: 1..125
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIALcoord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26184-RACarg26184-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I