Carg08871 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTTTAACAATTCCCTTTGGTCATACGACGGCGACGACGATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAGCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTTTACCAGCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTTACAGACTCATTCTTCACTTGCAGCTTACCAGTGCATTCGATCTCCGCTCTCACCTCTCTATGTAAGTTTAGTTTAGTTTCGTTTTCTTTGGTTATTTTGTTTAGTTCGTTGAGATGCTTGGAGTTATATATTGGATTCTCGGGAAATGCTTGGGAGGTAGGGGAATCGCTTGATTTTGAGCTGATGAAAGGAATTGTTTGGGAAAAATTGACTCACTGGAGTCTCTATTCCCGTATTTCTTTGTTTGCACCATTTGATATTAAACGATGTTCGGTTACATAATTAAGGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCGAAAGAAGAGGAGAAAGCCGATGACGCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAATGTTACTCGTGAGTTTTCAAAATTATGGTTTTTATTAATGAATTTTGGTTCTTTATCATTATTGTCTTGCAAGTTTGTGAGTAAATGACACACTAAGATTTTCGATCAGGTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTTGAAGGTTTGTCATTCTGTTTTATCAAATATGCTCCTTGGTTTAGTATTGTTTTGGCGTAGATATGTAAGTATTTGGAGGGCAGAGATTAGCTATACCATGTAAATTGGCCATTCTCTGAAAATTTCGTTTCAAGTTAGCTCTTGAAACGCAAATTATTATTAAGACGCGTAAAACATATAAACAAGCATTATATATATCTGCTTAAACCCAGAGGCCAGAGGCAATGTAGTGATAGACATCCACTTCTTTTGTTTAGAATTGTAACCCTTAAGCAGAATGATTGAGCCTTTGATCTTAGCATTACTGATAGATTTGTGATTTCGACCCCCCCCCCGCGGCGGGAATGATGCAACGATTTCTGCTCTTCATTTTCATTTCACAACTCCATGTTCCCTTTTATGAGTTCTGCTCTTCATTTTCATTTCACAACTCCCATGTCTTTTATGAAGCTTAATACTCATGCTAGGGCATCTTTCTTGTTCAAAAAGATAAAGTAAATGCTTTTGTGAACTATTTGTTTGCATTTTAATCCTAAAGCTATCGTCGAGCATTGTATGTCCATCAATAAGGTCTTATCCTTTAAGTTATCATTATGATTGAGCATCTTTTGTCCATCAATAAGCCCTTATCCCTAAAACTTATTATAGCTATAATTATTCGAGACACAATATGGGAGAATGTGGCTAACTCAACCTTCCATCAAGTTGTCTTTAGCATCATTTTATGGGAAAGTTGGGCTCCTTTAAGGACTCCTTGAATCTTGGAGTCTAGAAGTCATGGGGATATTAGGATCAAGAAGCAAGAGAATTGAGGATTAGGTTTCTGGATGGGCTTGTAAATATGGCCTCTTTGAGTGACTTCTTAAAGATGAACGAAGCCTATCTAAAAGCGTAGTTTGCGCAGGTAATTAGGAAAGAGGCGATAAGTTGGAGGCAAAAGCTTAAGTTAGATGGGTGGGGGAAGGAGATTGCGATTCTGAAGACTTCAATAAAATCACCAGCGGAGGGAGTAAGAACACTATATGCCCTTTGGAGAATGACAATGGCGAGAGGCTTCGAGGGGAAAAAGAGATTGAGAAGAAGATAGCCCTTTTTTTTGCTTCTCTCTATGCTTCAGTAGTTCTTAACTATGTATGTGTGAGATCCCACGTCGCAAAACATTCTTTATAAGGATATGAAGACTTCTCTCTAGCAGTCGTATTTTAAAAACTTTGAGGTGAAGCCCAAAAAGGAAAACCAAAAGAACAATATCTGCTAGCAGTAGACTTGGGTCGCTATAGTATGTATGAGACTATTTTCTCATCTATACACTAGAGTTGCATACACTAGCTTTTTAGCTATGTACCTCCGACATGCATCGGATGGCTCTTCACTCCTTTATTCCCTTCCATTTTATTTTTTCTCGCTATTTTAATATACTTCATTGAGCCAATTCAAAATGCAAAACTCAAACTTCTCGTAATTAACCATGTTGTTTGTATTTTCAATGCAGTCCAAAAAAGCAAAGCGTAGACTGAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAAATTATTGGTACAAGTCTCCTGTCGTGCTAGCTTCAAGATCACCATCGAGATATCAGTCCTTGCTCATCTTTTGGATTTTATATTAAGTGCCTTAGAACAAACTAAGAAAACAATTATTTCTTCTTTATTTGAAGTTTTGATGATAGAGATGATTGTGATTAAAAACGAGGTGATCTTTCAATTGTCTCCTTGTACCCTGAGTTAACCCCTAACAGTGTCCAATAATATTTATCTTTCGCATGGGATACGGTCCTACATGTGGCTTGCAATTAGCGATGTCCACGACACGAGGACCTCATCTCTACCTTCCATTTAATTTTCTAT TCTCTCTTTAACAATTCCCTTTGGTCATACGACGGCGACGACGATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAGCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTTTACCAGCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTTACAGACTCATTCTTCACTTGCAGCTTACCAGTGCATTCGATCTCCGCTCTCACCTCTCTATGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCGAAAGAAGAGGAGAAAGCCGATGACGCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAATGTTACTCGTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTTGAAGTCCAAAAAAGCAAAGCGTAGACTGAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAAATTATTGGTACAAGTCTCCTGTCGTGCTAGCTTCAAGATCACCATCGAGATATCAGTCCTTGCTCATCTTTTGGATTTTATATTAAGTGCCTTAGAACAAACTAAGAAAACAATTATTTCTTCTTTATTTGAAGTTTTGATGATAGAGATGATTGTGATTAAAAACGAGGTGATCTTTCAATTGTCTCCTTGTACCCTGAGTTAACCCCTAACAGTGTCCAATAATATTTATCTTTCGCATGGGATACGGTCCTACATGTGGCTTGCAATTAGCGATGTCCACGACACGAGGACCTCATCTCTACCTTCCATTTAATTTTCTAT ATGCTCAGGTGGTGTTCGAAGCTTCGATCTGCGGCGGCGAAACCATCTCAAATTGTACATAGCGTTTCTTCCACCCGCAGGATCTTTCACTCTGCTCCATCACTTTACCAGCCTCTCCATTTCTCTCCGAATAATTTGAGTTCCAGGTCCCTTCTCAATGCATCTTTACAGACTCATTCTTCACTTGCAGCTTACCAGTGCATTCGATCTCCGCTCTCACCTCTCTATGCTGTTCAAGTGCGACATGTTTCGTCAAGAGAGCGAAAGAAGAGGAGAAAGCCGATGACGCCAGTTACTTCCAAATTGAAGAAAACGAAGATAAAATGTTACTCGTCTTACAAGTCTAGGTTTTGGGTGAGGAAGGATGGGAGCATTAAACGTAGAAAGGAAGGGAAAAGGCACAATGCTCATTTGAAGTCCAAAAAAGCAAAGCGTAGACTGAGACAGCCAGGCACTGTCCCATTGGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAA MLRWCSKLRSAAAKPSQIVHSVSSTRRIFHSAPSLYQPLHFSPNNLSSRSLLNASLQTHSSLAAYQCIRSPLSPLYAVQVRHVSSRERKKRRKPMTPVTSKLKKTKIKCYSSYKSRFWVRKDGSIKRRKEGKRHNAHLKSKKAKRRLRQPGTVPLAYAKVMKKLNFCG Homology
BLAST of Carg08871 vs. NCBI nr
Match: KAG7036224.1 (hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg08871 vs. NCBI nr
Match: XP_022931031.1 (uncharacterized protein LOC111437349 [Cucurbita moschata] >KAG6606284.1 hypothetical protein SDJN03_03601, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg08871 vs. NCBI nr
Match: XP_023532529.1 (uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 317.8 bits (813), Expect = 5.7e-83 Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0
BLAST of Carg08871 vs. NCBI nr
Match: XP_022996248.1 (uncharacterized protein LOC111491530 [Cucurbita maxima]) HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81 Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of Carg08871 vs. NCBI nr
Match: XP_022156090.1 (uncharacterized protein LOC111023059 [Momordica charantia]) HSP 1 Score: 290.0 bits (741), Expect = 1.3e-74 Identity = 150/168 (89.29%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Carg08871 vs. ExPASy TrEMBL
Match: A0A6J1ESK5 (uncharacterized protein LOC111437349 OS=Cucurbita moschata OX=3662 GN=LOC111437349 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 5.6e-84 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg08871 vs. ExPASy TrEMBL
Match: A0A6J1KAA4 (uncharacterized protein LOC111491530 OS=Cucurbita maxima OX=3661 GN=LOC111491530 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81 Identity = 164/168 (97.62%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of Carg08871 vs. ExPASy TrEMBL
Match: A0A6J1DPB8 (uncharacterized protein LOC111023059 OS=Momordica charantia OX=3673 GN=LOC111023059 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 6.2e-75 Identity = 150/168 (89.29%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Carg08871 vs. ExPASy TrEMBL
Match: A0A1S3CDR4 (uncharacterized protein LOC103499252 OS=Cucumis melo OX=3656 GN=LOC103499252 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66 Identity = 138/167 (82.63%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of Carg08871 vs. ExPASy TrEMBL
Match: A0A0A0LBT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G638010 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 7.6e-65 Identity = 135/167 (80.84%), Postives = 148/167 (88.62%), Query Frame = 0
BLAST of Carg08871 vs. TAIR 10
Match: AT5G45590.1 (Ribosomal protein L35 ) HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29 Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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