Carg03641 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTCTAATCTTCCTCGGAATCACAGCGGTAAAACTTGTGTCTGTTCTTAAATCAATGAAAGTCGCAGAAGGGCGCACTTTCGAATCTGAGCCACAAGTTGCAGAACAAACCGAACCCTCATCCTCAGAATCACGATGCGGCTACAGTTGCAATTTCTCCGCCACAACATCGCCTTATCACCGTCGCCATCGTCAGTACCCGCCACCTTCTTCACTTCAACTCCTCCAATTTCGTACAGTTGGCAATTGAGAGTCAGGACACCGAAGCTGACGCTGCCGCCGCTCGAATCGCGGAGACCGAAACTCGTAGTTTCGGCAACGGCAGTTCCAGATAATCGGCCTCTGGATCTGACGGAGGATAACGTGAGACAGGCACTGGGTGACGCTCGTGCGGAGCTCGCACAGATCTTCGACGCCTCCGTCGGCATTACAGGTTAGCGAGTTTCTGCCACACTACAAGTTTTCGATATTGAAGTTCCTATAAATTGAGAGAAGAAAGTGACTCAGGAGTGGTGGAATTGGCGGAATTAGATGGACCATTTGTGAAGATTAGTCTTAAAGGTCGATTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGCAGAGAATCCCTGTAAGTCTCTCTTTCTCTGTCTCTACATTTTTGACTGATTAAAATTTAGTGTCTTGTTTAGGTTTGGATTGATTGATTTTGGGTAAACAGTTTTGTATATGAATAGTTAGTTAGGAGTGGTGTTGATGCAGGAGATTTTGGAGGTTGAAATAGAAGATGAGAGTCAATTGGATGATAGTCCTGCAAGCTTTTAATCACCCAGAAACTGAGTAGCTACCATATTGGTATGAACCATGAACCCACCCAACATACAAATTTTATTGTTGTTCATAGCTTATTGGTGTTTATGCTTGTTTTATGGGGAAACCATATGACTTAACACAACTTGATATTTGTTTTGATTGCTTAAA TTTCTCTAATCTTCCTCGGAATCACAGCGGTAAAACTTGTGTCTGTTCTTAAATCAATGAAAGTCGCAGAAGGGCGCACTTTCGAATCTGAGCCACAAGTTGCAGAACAAACCGAACCCTCATCCTCAGAATCACGATGCGGCTACAGTTGCAATTTCTCCGCCACAACATCGCCTTATCACCGTCGCCATCGTCAGTACCCGCCACCTTCTTCACTTCAACTCCTCCAATTTCGTACAGTTGGCAATTGAGAGTCAGGACACCGAAGCTGACGCTGCCGCCGCTCGAATCGCGGAGACCGAAACTCGTAGTTTCGGCAACGGCAGTTCCAGATAATCGGCCTCTGGATCTGACGGAGGATAACGTGAGACAGGCACTGGGTGACGCTCGTGCGGAGCTCGCACAGATCTTCGACGCCTCCGTCGGCATTACAGGAGTGGTGGAATTGGCGGAATTAGATGGACCATTTGTGAAGATTAGTCTTAAAGGTCGATTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGCAGAGAATCCCTGAGATTTTGGAGGTTGAAATAGAAGATGAGAGTCAATTGGATGATAGTCCTGCAAGCTTTTAATCACCCAGAAACTGAGTAGCTACCATATTGGTATGAACCATGAACCCACCCAACATACAAATTTTATTGTTGTTCATAGCTTATTGGTGTTTATGCTTGTTTTATGGGGAAACCATATGACTTAACACAACTTGATATTTGTTTTGATTGCTTAAA ATGCGGCTACAGTTGCAATTTCTCCGCCACAACATCGCCTTATCACCGTCGCCATCGTCAGTACCCGCCACCTTCTTCACTTCAACTCCTCCAATTTCGTACAGTTGGCAATTGAGAGTCAGGACACCGAAGCTGACGCTGCCGCCGCTCGAATCGCGGAGACCGAAACTCGTAGTTTCGGCAACGGCAGTTCCAGATAATCGGCCTCTGGATCTGACGGAGGATAACGTGAGACAGGCACTGGGTGACGCTCGTGCGGAGCTCGCACAGATCTTCGACGCCTCCGTCGGCATTACAGGAGTGGTGGAATTGGCGGAATTAGATGGACCATTTGTGAAGATTAGTCTTAAAGGTCGATTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGCAGAGAATCCCTGAGATTTTGGAGGTTGAAATAGAAGATGAGAGTCAATTGGATGATAGTCCTGCAAGCTTTTAA MRLQLQFLRHNIALSPSPSSVPATFFTSTPPISYSWQLRVRTPKLTLPPLESRRPKLVVSATAVPDNRPLDLTEDNVRQALGDARAELAQIFDASVGITGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKQRIPEILEVEIEDESQLDDSPASF Homology
BLAST of Carg03641 vs. NCBI nr
Match: KAG6580734.1 (hypothetical protein SDJN03_20736, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017487.1 hypothetical protein SDJN02_19352 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 312.0 bits (798), Expect = 3.0e-81 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Carg03641 vs. NCBI nr
Match: XP_022934752.1 (uncharacterized protein LOC111441837 [Cucurbita moschata]) HSP 1 Score: 307.8 bits (787), Expect = 5.6e-80 Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0
BLAST of Carg03641 vs. NCBI nr
Match: XP_022983136.1 (uncharacterized protein LOC111481776 [Cucurbita maxima]) HSP 1 Score: 304.3 bits (778), Expect = 6.2e-79 Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
BLAST of Carg03641 vs. NCBI nr
Match: XP_023529130.1 (uncharacterized protein LOC111791863 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 294.7 bits (753), Expect = 4.9e-76 Identity = 153/159 (96.23%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Carg03641 vs. NCBI nr
Match: XP_038903952.1 (uncharacterized protein LOC120090394 isoform X2 [Benincasa hispida]) HSP 1 Score: 234.6 bits (597), Expect = 6.1e-58 Identity = 128/166 (77.11%), Postives = 136/166 (81.93%), Query Frame = 0
BLAST of Carg03641 vs. ExPASy TrEMBL
Match: A0A6J1F3P2 (uncharacterized protein LOC111441837 OS=Cucurbita moschata OX=3662 GN=LOC111441837 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80 Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0
BLAST of Carg03641 vs. ExPASy TrEMBL
Match: A0A6J1J196 (uncharacterized protein LOC111481776 OS=Cucurbita maxima OX=3661 GN=LOC111481776 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 3.0e-79 Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
BLAST of Carg03641 vs. ExPASy TrEMBL
Match: A0A0A0LGR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778420 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53 Identity = 123/168 (73.21%), Postives = 130/168 (77.38%), Query Frame = 0
BLAST of Carg03641 vs. ExPASy TrEMBL
Match: A0A1S3B7J1 (uncharacterized protein LOC103486663 OS=Cucumis melo OX=3656 GN=LOC103486663 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53 Identity = 122/161 (75.78%), Postives = 129/161 (80.12%), Query Frame = 0
BLAST of Carg03641 vs. ExPASy TrEMBL
Match: A0A6J1CS17 (uncharacterized protein LOC111014231 OS=Momordica charantia OX=3673 GN=LOC111014231 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 6.3e-45 Identity = 110/156 (70.51%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of Carg03641 vs. TAIR 10
Match: AT2G33180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 147.5 bits (371), Expect = 9.1e-36 Identity = 75/114 (65.79%), Postives = 89/114 (78.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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