CSPI04G00790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI04G00790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	phytochrome A-associated F-box protein
Location	Chr4: 417378 .. 419330 (-)
RNA-Seq Expression	CSPI04G00790
Synteny	CSPI04G00790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAATTGGCTGGTGTTTTTATGATGCAAAGTTGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAGTTCTCCTGCACAATCCGCAACATCTGCTGGAAAATCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAAAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTAGCTCTTTTGTCTATAATTTAAAATCATTTATTGCTTAACTTCTTTCCTTTTCTTGCCCGTTTCCATGAACTGAACACGAGTTTCCATTAAAACCGTTGCTATAGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAGATTTTGAGGACAAGAAGATATTTTAAGGAAATTTGCAGTTAAAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTATGTTTGGATGATCTATTTAGTGCTTTCAGGTTACGTTTTAGGTGTTTTTGGGTTAAATCAGTTCTTCTACGAGCACTTTCTTGAGTGATTCTTTTAGAAGTATTGAAGTATATTACTTTTGATTGTTGACAAATGTTCTTAAATTCAATCTCAAAAGTCATATGTTACTCTTATAATTGCG

mRNA sequence

GGGGAATTGGCTGGTGTTTTTATGATGCAAAGTTGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAGTTCTCCTGCACAATCCGCAACATCTGCTGGAAAATCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAAAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTAGCTCTTTTGTCTATAATTTAAAATCATTTATTGCTTAACTTCTTTCCTTTTCTTGCCCGTTTCCATGAACTGAACACGAGTTTCCATTAAAACCGTTGCTATAGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAGATTTTGAGGACAAGAAGATATTTTAAGGAAATTTGCAGTTAAAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTATGTTTGGATGATCTATTTAGTGCTTTCAGGTTACGTTTTAGGTGTTTTTGGGTTAAATCAGTTCTTCTACGAGCACTTTCTTGAGTGATTCTTTTAGAAGTATTGAAGTATATTACTTTTGATTGTTGACAAATGTTCTTAAATTCAATCTCAAAAGTCATATGTTACTCTTATAATTGCG

Coding sequence (CDS)

ATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAGTTCTCCTGCACAATCCGCAACATCTGCTGGAAAATCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAAAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

Protein sequence

MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVSDLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT*

Homology

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BLAST of CSPI04G00790 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2)

HSP 1 Score: 433.0 bits (1112), Expect = 3.6e-120
Identity = 217/354 (61.30%), Postives = 256/354 (72.32%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFS  +RN+C K +C +AIP+++S
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 105 DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 164
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 165 GPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMY 224
           GPD+N            +  P++T L  +N +  +    S   +   WSLYDDLY DT+ 
Sbjct: 121 GPDQNL-----------DPKPTTTDL-ALNDEEVSKPVGSGLETTSFWSLYDDLYTDTI- 180

Query: 225 NDSEAP---DVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQG 284
               AP   D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQG
Sbjct: 181 ---PAPPPEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQG 240

Query: 285 NKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-L 344
           NKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L
Sbjct: 241 NKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGL 300

Query: 345 NCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
            CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 KCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

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BLAST of CSPI04G00790 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 261 SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KD 320
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K 
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 182

Query: 321 GNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYHDDGEPVVRAYVCENGHVSGA 377
              +  ++ C +C  K  W +  A       C+ R+  Y D     +  +VC NGH+ G 
Sbjct: 183 VPFHPSEV-CPYCKAK-LWSMLQAKIIPQSACI-RLEAYED----CIEYFVCLNGHLLGI 239

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BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A0A0KWJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 1.2e-198
Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWK KCSNAIPSLVS
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 165 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 224
           PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 225 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 284
           KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 285 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 344
           GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 345 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 334

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BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A5D3E0Q4 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001020 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 5.3e-191
Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWK KCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 165 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 224
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 225 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 284
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 285 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 344
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 345 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

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BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A1S4DZU2 (phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 5.3e-191
Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWK KCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 165 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 224
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 225 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 284
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 285 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 344
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 345 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

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BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A5A7TSM0 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001020 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.4e-190
Identity = 324/335 (96.72%), Postives = 327/335 (97.61%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MA SLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWK KCSNAIPSLVS
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 165 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 224
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 225 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 284
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 285 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 344
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 345 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

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BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A6J1DLZ5 (phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.7e-171
Identity = 298/375 (79.47%), Postives = 322/375 (85.87%), Query Frame = 0


Query: 13  TPFHFHHHRPLFSLSSSSSSSLSLPFST-------PLFP--MADSLFSTLPDDILLNIFF 72
           T FHF   +P  S S+  S+   L   T       PL    MA+S FS LP+D+LLNIFF
Sbjct: 10  TVFHF---KPTASPSTHYSNLAPLSLQTLDFSSGCPLISSIMAESAFSNLPEDVLLNIFF 69

Query: 73  KLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVSDLLVGDSIPAGGWASLHKL 132
           KLEDDPRNWARLACVSTKFS T+RN+CWK KCS AIPSL++DL+VGDS+PAGGWASLHKL
Sbjct: 70  KLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKL 129

Query: 133 AVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSA 192
           AVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQ+ +P+++      F+VNSD SA
Sbjct: 130 AVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQ----FQVNSDFSA 189

Query: 193 SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRR 252
           SAS     SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFM DREF  SKRR
Sbjct: 190 SAS-----SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRR 249

Query: 253 KICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFK 312
           KI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFK
Sbjct: 250 KIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFK 309

Query: 313 NFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCE 372
           NFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCE
Sbjct: 310 NFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCE 369

Query: 373 NGHVSGAWTDLPLYT 379
           NGHVSGAWTDLPLYT
Sbjct: 370 NGHVSGAWTDLPLYT 372

[Close]

BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_011652932.1 (phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypothetical protein Csa_014680 [Cucumis sativus])

HSP 1 Score: 780.4 bits (2014), Expect = 7.0e-222
Identity = 377/379 (99.47%), Postives = 377/379 (99.47%), Query Frame = 0


Query: 1   MQMLKKTTTTTTTPFHFHHHRPLFSL-SSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL 60
           MQMLKKTTTTTTTPFHFHHHRPLFSL SSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL
Sbjct: 1   MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL 60

Query: 61  NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVSDLLVGDSIPAGGWAS 120
           NIFFKLEDDPRNWARLACVSTKFSCTIRNICWK KCSNAIPSLVSDLLVGDSIPAGGWAS
Sbjct: 61  NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS 120

Query: 121 LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS 180
           LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS
Sbjct: 121 LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS 180

Query: 181 DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV 240
           DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV
Sbjct: 181 DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV 240

Query: 241 SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR 300
           SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR
Sbjct: 241 SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR 300

Query: 301 GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA 360
           GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA
Sbjct: 301 GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA 360

Query: 361 YVCENGHVSGAWTDLPLYT 379
           YVCENGHVSGAWTDLPLYT
Sbjct: 361 YVCENGHVSGAWTDLPLYT 379

[Close]

BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_016901491.1 (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-190
Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWK KCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 165 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 224
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 225 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 284
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 285 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 344
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 345 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of CSPI04G00790 vs. NCBI nr
Match: KAA0044375.1 (phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.1 bits (1738), Expect = 7.1e-190
Identity = 324/335 (96.72%), Postives = 327/335 (97.61%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MA SLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWK KCSNAIPSLVS
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 165 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 224
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 225 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 284
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 285 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 344
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 345 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_038905727.1 (phytochrome A-associated F-box protein [Benincasa hispida])

HSP 1 Score: 664.8 bits (1714), Expect = 4.3e-187
Identity = 320/338 (94.67%), Postives = 325/338 (96.15%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWK KCSNAIPSLV+
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVA 60

Query: 105 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 164
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKL SS   +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLCSSHNPE 120

Query: 165 PESNPSSTALFEVNSDL----SASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQ 224
           PES+P STALFEVNSDL    SASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQ
Sbjct: 121 PESDP-STALFEVNSDLSASASASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQ 180

Query: 225 IGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI 284
           IG TKVEKGVFMTD++FCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI
Sbjct: 181 IGVTKVEKGVFMTDKDFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI 240

Query: 285 CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSA 344
           CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNR KIDLNCAFCSCKETWDLHSA
Sbjct: 241 CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRKKIDLNCAFCSCKETWDLHSA 300

Query: 345 FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
           FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 337

[Close]

BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_022155270.1 (phytochrome A-associated F-box protein isoform X1 [Momordica charantia])

HSP 1 Score: 610.5 bits (1573), Expect = 9.6e-171
Identity = 298/375 (79.47%), Postives = 322/375 (85.87%), Query Frame = 0


Query: 13  TPFHFHHHRPLFSLSSSSSSSLSLPFST-------PLFP--MADSLFSTLPDDILLNIFF 72
           T FHF   +P  S S+  S+   L   T       PL    MA+S FS LP+D+LLNIFF
Sbjct: 10  TVFHF---KPTASPSTHYSNLAPLSLQTLDFSSGCPLISSIMAESAFSNLPEDVLLNIFF 69

Query: 73  KLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVSDLLVGDSIPAGGWASLHKL 132
           KLEDDPRNWARLACVSTKFS T+RN+CWK KCS AIPSL++DL+VGDS+PAGGWASLHKL
Sbjct: 70  KLEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKL 129

Query: 133 AVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSA 192
           AVCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQ+ +P+++      F+VNSD SA
Sbjct: 130 AVCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQ----FQVNSDFSA 189

Query: 193 SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRR 252
           SAS     SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFM DREF  SKRR
Sbjct: 190 SAS-----SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRR 249

Query: 253 KICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFK 312
           KI RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFK
Sbjct: 250 KIYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFK 309

Query: 313 NFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCE 372
           NFK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCE
Sbjct: 310 NFKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCE 369

Query: 373 NGHVSGAWTDLPLYT 379
           NGHVSGAWTDLPLYT
Sbjct: 370 NGHVSGAWTDLPLYT 372

[Close]

BLAST of CSPI04G00790 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein )

HSP 1 Score: 433.0 bits (1112), Expect = 2.6e-121
Identity = 217/354 (61.30%), Postives = 256/354 (72.32%), Query Frame = 0


Query: 45  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVS 104
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFS  +RN+C K +C +AIP+++S
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 105 DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 164
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 165 GPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMY 224
           GPD+N            +  P++T L  +N +  +    S   +   WSLYDDLY DT+ 
Sbjct: 121 GPDQNL-----------DPKPTTTDL-ALNDEEVSKPVGSGLETTSFWSLYDDLYTDTI- 180

Query: 225 NDSEAP---DVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQG 284
               AP   D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQG
Sbjct: 181 ---PAPPPEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQG 240

Query: 285 NKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-L 344
           NKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L
Sbjct: 241 NKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGL 300

Query: 345 NCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379
            CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 KCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of CSPI04G00790 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 )

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-08
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 261 SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KD 320
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K 
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 182

Query: 321 GNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYHDDGEPVVRAYVCENGHVSGA 377
              +  ++ C +C  K  W +  A       C+ R+  Y D     +  +VC NGH+ G 
Sbjct: 183 VPFHPSEV-CPYCKAK-LWSMLQAKIIPQSACI-RLEAYED----CIEYFVCLNGHLLGI 239

The following BLAST results are available for this feature:

BLAST of CSPI04G00790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEA8	3.6e-120	61.30	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 P...	[more]
Q9LF38	1.2e-06	34.92	EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1	[more]

BLAST of CSPI04G00790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWJ3	1.2e-198	99.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1	[more]
A0A5D3E0Q4	5.3e-191	97.01	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DZU2	5.3e-191	97.01	phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 P...	[more]
A0A5A7TSM0	3.4e-190	96.72	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1DLZ5	4.7e-171	79.47	phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of CSPI04G00790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652932.1	7.0e-222	99.47	phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypotheti...	[more]
XP_016901491.1	1.1e-190	97.01	PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phy...	[more]
KAA0044375.1	7.1e-190	96.72	phytochrome A-associated F-box protein [Cucumis melo var. makuwa]	[more]
XP_038905727.1	4.3e-187	94.67	phytochrome A-associated F-box protein [Benincasa hispida]	[more]
XP_022155270.1	9.6e-171	79.47	phytochrome A-associated F-box protein isoform X1 [Momordica charantia]	[more]

BLAST of CSPI04G00790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02440.1	2.6e-121	61.30	F-box family protein	[more]
AT5G15440.1	8.5e-08	34.92	EID1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 46..378
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 46..378
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 48..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G00790.1	CSPI04G00790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0010099	regulation of photomorphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding