CSPI04G00790 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGGAATTGGCTGGTGTTTTTATGATGCAAAGTTGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAGTTCTCCTGCACAATCCGCAACATCTGCTGGAAAATCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAAAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTAGCTCTTTTGTCTATAATTTAAAATCATTTATTGCTTAACTTCTTTCCTTTTCTTGCCCGTTTCCATGAACTGAACACGAGTTTCCATTAAAACCGTTGCTATAGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAGATTTTGAGGACAAGAAGATATTTTAAGGAAATTTGCAGTTAAAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTATGTTTGGATGATCTATTTAGTGCTTTCAGGTTACGTTTTAGGTGTTTTTGGGTTAAATCAGTTCTTCTACGAGCACTTTCTTGAGTGATTCTTTTAGAAGTATTGAAGTATATTACTTTTGATTGTTGACAAATGTTCTTAAATTCAATCTCAAAAGTCATATGTTACTCTTATAATTGCG GGGGAATTGGCTGGTGTTTTTATGATGCAAAGTTGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAGTTCTCCTGCACAATCCGCAACATCTGCTGGAAAATCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAAAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTAGCTCTTTTGTCTATAATTTAAAATCATTTATTGCTTAACTTCTTTCCTTTTCTTGCCCGTTTCCATGAACTGAACACGAGTTTCCATTAAAACCGTTGCTATAGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAGATTTTGAGGACAAGAAGATATTTTAAGGAAATTTGCAGTTAAAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTATGTTTGGATGATCTATTTAGTGCTTTCAGGTTACGTTTTAGGTGTTTTTGGGTTAAATCAGTTCTTCTACGAGCACTTTCTTGAGTGATTCTTTTAGAAGTATTGAAGTATATTACTTTTGATTGTTGACAAATGTTCTTAAATTCAATCTCAAAAGTCATATGTTACTCTTATAATTGCG ATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAGTTCTCCTGCACAATCCGCAACATCTGCTGGAAAATCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCGAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAAAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKIKCSNAIPSLVSDLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT* Homology
BLAST of CSPI04G00790 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2) HSP 1 Score: 433.0 bits (1112), Expect = 3.6e-120 Identity = 217/354 (61.30%), Postives = 256/354 (72.32%), Query Frame = 0
BLAST of CSPI04G00790 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0
BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A0A0KWJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1) HSP 1 Score: 702.2 bits (1811), Expect = 1.2e-198 Identity = 333/334 (99.70%), Postives = 333/334 (99.70%), Query Frame = 0
BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A5D3E0Q4 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001020 PE=4 SV=1) HSP 1 Score: 676.8 bits (1745), Expect = 5.3e-191 Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0
BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A1S4DZU2 (phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 PE=4 SV=1) HSP 1 Score: 676.8 bits (1745), Expect = 5.3e-191 Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0
BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A5A7TSM0 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001020 PE=4 SV=1) HSP 1 Score: 674.1 bits (1738), Expect = 3.4e-190 Identity = 324/335 (96.72%), Postives = 327/335 (97.61%), Query Frame = 0
BLAST of CSPI04G00790 vs. ExPASy TrEMBL
Match: A0A6J1DLZ5 (phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1) HSP 1 Score: 610.5 bits (1573), Expect = 4.7e-171 Identity = 298/375 (79.47%), Postives = 322/375 (85.87%), Query Frame = 0
BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_011652932.1 (phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypothetical protein Csa_014680 [Cucumis sativus]) HSP 1 Score: 780.4 bits (2014), Expect = 7.0e-222 Identity = 377/379 (99.47%), Postives = 377/379 (99.47%), Query Frame = 0
BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_016901491.1 (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-190 Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0
BLAST of CSPI04G00790 vs. NCBI nr
Match: KAA0044375.1 (phytochrome A-associated F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 674.1 bits (1738), Expect = 7.1e-190 Identity = 324/335 (96.72%), Postives = 327/335 (97.61%), Query Frame = 0
BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_038905727.1 (phytochrome A-associated F-box protein [Benincasa hispida]) HSP 1 Score: 664.8 bits (1714), Expect = 4.3e-187 Identity = 320/338 (94.67%), Postives = 325/338 (96.15%), Query Frame = 0
BLAST of CSPI04G00790 vs. NCBI nr
Match: XP_022155270.1 (phytochrome A-associated F-box protein isoform X1 [Momordica charantia]) HSP 1 Score: 610.5 bits (1573), Expect = 9.6e-171 Identity = 298/375 (79.47%), Postives = 322/375 (85.87%), Query Frame = 0
BLAST of CSPI04G00790 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein ) HSP 1 Score: 433.0 bits (1112), Expect = 2.6e-121 Identity = 217/354 (61.30%), Postives = 256/354 (72.32%), Query Frame = 0
BLAST of CSPI04G00790 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 ) HSP 1 Score: 55.8 bits (133), Expect = 8.5e-08 Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|