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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. CTCAAAACTGGCCTAAAGATTTTTGTCCTCTCTCTCTTCTCATCTAATTCATGCCACATTCTTCAAACACCAAAACATCAATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTGGTGGTTTCAACTATAGGTGCAAGTCATTGCAAGGCTGCTTCTCTAAATTCAAACTTGGGCAATGAAACCACCACGGCAGCTACATCATCCACATGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGACAACATTGAAACCTCAGCATTTCCAAGCTTATATAATACTGTGCGGACTGCAAATGGGCAAAAGGCAGTATGTGGTCGGGTGGGAAGATACGATAACCAGAGATGTCTCCCCCAGAAGAGGCCCAACCCGATTCAAAAATGTTCTACATTTACTCGCAGCTGTTAATCACCAACACCAAGTAATTAGAAAGTGAACAGAAAATTCAATGTCGACACATGTGGTTTTCACATTTTCTTTTATTTTTATTTTTAAAATTTGGAGTGAAGTTTATATGTTATTTACTACCTACCTTACTTAATTAATGTCGCTTGTATTTATCTAATCACTCTGCTTTCGCTAAGCTTAACTTCTTCTTTCTTCTTTCACCTTCA mRNA sequence CTCAAAACTGGCCTAAAGATTTTTGTCCTCTCTCTCTTCTCATCTAATTCATGCCACATTCTTCAAACACCAAAACATCAATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTGGTGGTTTCAACTATAGGTGCAAGTCATTGCAAGGCTGCTTCTCTAAATTCAAACTTGGGCAATGAAACCACCACGGCAGCTACATCATCCACATGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGACAACATTGAAACCTCAGCATTTCCAAGCTTATATAATACTGTGCGGACTGCAAATGGGCAAAAGGCAGTATGTGGTCGGGTGGGAAGATACGATAACCAGAGATGTCTCCCCCAGAAGAGGCCCAACCCGATTCAAAAATGTTCTACATTTACTCGCAGCTGTTAATCACCAACACCAAGTAATTAGAAAGTGAACAGAAAATTCAATGTCGACACATGTGGTTTTCACATTTTCTTTTATTTTTATTTTTAAAATTTGGAGTGAAGTTTATATGTTATTTACTACCTACCTTACTTAATTAATGTCGCTTGTATTTATCTAATCACTCTGCTTTCGCTAAGCTTAACTTCTTCTTTCTTCTTTCACCTTCA Coding sequence (CDS) ATGCCACATTCTTCAAACACCAAAACATCAATGGCAACACCGACAACAACAACAATGGTAGCGGTAGCCATTATTGTGGTGGTTTCAACTATAGGTGCAAGTCATTGCAAGGCTGCTTCTCTAAATTCAAACTTGGGCAATGAAACCACCACGGCAGCTACATCATCCACATGGTGCAACAGTCTCGACAAGGAATGCCTCATTGGAGTCGAAGATGACAACATTGAAACCTCAGCATTTCCAAGCTTATATAATACTGTGCGGACTGCAAATGGGCAAAAGGCAGTATGTGGTCGGGTGGGAAGATACGATAACCAGAGATGTCTCCCCCAGAAGAGGCCCAACCCGATTCAAAAATGTTCTACATTTACTCGCAGCTGTTAA Protein sequence MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCNSLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKCSTFTRSC*
Homology
BLAST of CSPI03G21470 vs. ExPASy TrEMBL
Match: A0A0A0LA12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G316270 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCN 60 MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCN Sbjct: 1 MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCN 60
Query: 61 SLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKC 120 SLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKC Sbjct: 61 SLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKC 120
Query: 121 STFTRSC 128 STFTRSC Sbjct: 121 STFTRSC 127
BLAST of CSPI03G21470 vs. ExPASy TrEMBL
Match: A0A0A0KY59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0 Query: 11 MATPTTTTMVAVAIIVVVSTIGASHCKAAS-LNSNLGNETTTAATSSTWCNSLDKECLIG 70 MAT + A+ I+++ TI +S+C AAS L SN NET TA TS+ +CN L ++C Sbjct: 1 MATAAAPSTTAMTILILTLTI-SSYCNAASVLPSNFANETITAMTSTIFCNGLLQQC-FN 60
Query: 71 VEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCL-PQKRPNPIQKCSTFTRSC 128 VE++ I Y+T RT + +VCGR +C+ Q P P S + R+C Sbjct: 61 VEENGIH------YYSTPRTGSRASSVCGRFYNGSYIKCITTQGSPKPKDCRSAYDRTC 111
BLAST of CSPI03G21470 vs. NCBI nr
Match: KGN57814.1 (hypothetical protein Csa_009509 [Cucumis sativus]) HSP 1 Score: 252.3 bits (643), Expect = 2.2e-63 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 Query: 1 MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCN 60 MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCN Sbjct: 1 MPHSSNTKTSMATPTTTTMVAVAIIVVVSTIGASHCKAASLNSNLGNETTTAATSSTWCN 60
Query: 61 SLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKC 120 SLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKC Sbjct: 61 SLDKECLIGVEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCLPQKRPNPIQKC 120
Query: 121 STFTRSC 128 STFTRSC Sbjct: 121 STFTRSC 127
BLAST of CSPI03G21470 vs. NCBI nr
Match: KGN53789.1 (hypothetical protein Csa_015152 [Cucumis sativus]) HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0 Query: 11 MATPTTTTMVAVAIIVVVSTIGASHCKAAS-LNSNLGNETTTAATSSTWCNSLDKECLIG 70 MAT + A+ I+++ TI +S+C AAS L SN NET TA TS+ +CN L ++C Sbjct: 1 MATAAAPSTTAMTILILTLTI-SSYCNAASVLPSNFANETITAMTSTIFCNGLLQQC-FN 60
Query: 71 VEDDNIETSAFPSLYNTVRTANGQKAVCGRVGRYDNQRCL-PQKRPNPIQKCSTFTRSC 128 VE++ I Y+T RT + +VCGR +C+ Q P P S + R+C Sbjct: 61 VEENGIH------YYSTPRTGSRASSVCGRFYNGSYIKCITTQGSPKPKDCRSAYDRTC 111
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LA12 | 1.1e-63 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G316270 PE=4 SV=1 | [more] |
A0A0A0KY59 | 1.1e-04 | 36.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN57814.1 | 2.2e-63 | 100.00 | hypothetical protein Csa_009509 [Cucumis sativus] | [more] |
KGN53789.1 | 2.4e-04 | 36.97 | hypothetical protein Csa_015152 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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