CSPI03G21000 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGGAAAAGGGACTATGTTTTCGATGTGACGAAAAATTCAGTCTGGGGCACCGTTGCAAAAGACGAGAATTAAATATCATTGTTATTCAAGAAGGGGAGGACTTAAGTGGGGAAATTGATAAAGTAGCAAAGGAGACTGAAGATGAGAATGAGCAAATCAATACTGAGATTGCGAATTTGTCTTTACATTCGTTGGTAGGTTTTAGTTCTCCTAAAACCATAAAAATAAAAGGCGAAATCAGGAATCGCGAAGTTGTCGTGTCGATGGGGGAGCTACACATAACTTTATTTCGGAGGAGGTGGTCAAGGAATTAAAAATTCCAATAGAAACTTTAGATGCTTATGGCGTTGTTTTGGGAACCGGGGGTGTAGTTCGAGCAACATGA ATGAAGAAGGAAAAGGGACTATGTTTTCGATGTGACGAAAAATTCAGTCTGGGGCACCGTTGCAAAAGACGAGAATTAAATATCATTGTTATTCAAGAAGGGGAGGACTTAAGTGGGGAAATTGATAAAGTAGCAAAGGAGACTGAAGATGAGAATGAGCAAATCAATACTGAGATTGCGAATTTGTCTTTACATTCGTTGGAATCGCGAAGTTGTCGTGTCGATGGGGGAGCTACACATAACTTTATTTCGGAGGAGGTGGTCAAGGAATTAAAAATTCCAATAGAAACTTTAGATGCTTATGGCGTTGTTTTGGGAACCGGGGGTGTAGTTCGAGCAACATGA ATGAAGAAGGAAAAGGGACTATGTTTTCGATGTGACGAAAAATTCAGTCTGGGGCACCGTTGCAAAAGACGAGAATTAAATATCATTGTTATTCAAGAAGGGGAGGACTTAAGTGGGGAAATTGATAAAGTAGCAAAGGAGACTGAAGATGAGAATGAGCAAATCAATACTGAGATTGCGAATTTGTCTTTACATTCGTTGGAATCGCGAAGTTGTCGTGTCGATGGGGGAGCTACACATAACTTTATTTCGGAGGAGGTGGTCAAGGAATTAAAAATTCCAATAGAAACTTTAGATGCTTATGGCGTTGTTTTGGGAACCGGGGGTGTAGTTCGAGCAACATGA MKKEKGLCFRCDEKFSLGHRCKRRELNIIVIQEGEDLSGEIDKVAKETEDENEQINTEIANLSLHSLESRSCRVDGGATHNFISEEVVKELKIPIETLDAYGVVLGTGGVVRAT* Homology
BLAST of CSPI03G21000 vs. ExPASy TrEMBL
Match: A0A5D3CTU6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00600 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31 Identity = 81/129 (62.79%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of CSPI03G21000 vs. ExPASy TrEMBL
Match: A0A6J1DN22 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111021922 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.2e-15 Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 0
BLAST of CSPI03G21000 vs. ExPASy TrEMBL
Match: A0A067D9Z8 (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g045527mg PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 8.4e-15 Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of CSPI03G21000 vs. ExPASy TrEMBL
Match: A0A5C7IJS7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.2e-14 Identity = 51/133 (38.35%), Postives = 78/133 (58.65%), Query Frame = 0
BLAST of CSPI03G21000 vs. ExPASy TrEMBL
Match: A0A5D3CA10 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00060 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 4.2e-14 Identity = 49/134 (36.57%), Postives = 79/134 (58.96%), Query Frame = 0
BLAST of CSPI03G21000 vs. NCBI nr
Match: KAE8650876.1 (hypothetical protein Csa_002497, partial [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of CSPI03G21000 vs. NCBI nr
Match: XP_031737572.1 (uncharacterized protein LOC116402461 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of CSPI03G21000 vs. NCBI nr
Match: KAA0039528.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15281.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31 Identity = 81/129 (62.79%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of CSPI03G21000 vs. NCBI nr
Match: KAE8647113.1 (hypothetical protein Csa_021721 [Cucumis sativus]) HSP 1 Score: 101.3 bits (251), Expect = 5.8e-18 Identity = 49/68 (72.06%), Postives = 61/68 (89.71%), Query Frame = 0
BLAST of CSPI03G21000 vs. NCBI nr
Match: KAF8398742.1 (hypothetical protein HHK36_014600 [Tetracentron sinense]) HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16 Identity = 53/129 (41.09%), Postives = 86/129 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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