Bhi12G002116 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCGACGGAGGTTCAACTACATATCTGACATCCAGAATACTCCAGGGATCAGTCTTTTCTCGGATGGGGACATCGAAAAAGCTTTTCTTGACTTCTTTACTGATGTTTATAGGGGCTCATCAGAATGTGATTGGATGGTGGATAATCTTGATTGGCGGCCCATTGATTTTGCACAAGCCTGA ATGGCTCGACGGAGGTTCAACTACATATCTGACATCCAGAATACTCCAGGGATCAGTCTTTTCTCGGATGGGGACATCGAAAAAGCTTTTCTTGACTTCTTTACTGATGTTTATAGGGGCTCATCAGAATGTGATTGGATGGTGGATAATCTTGATTGGCGGCCCATTGATTTTGCACAAGCCTGA ATGGCTCGACGGAGGTTCAACTACATATCTGACATCCAGAATACTCCAGGGATCAGTCTTTTCTCGGATGGGGACATCGAAAAAGCTTTTCTTGACTTCTTTACTGATGTTTATAGGGGCTCATCAGAATGTGATTGGATGGTGGATAATCTTGATTGGCGGCCCATTGATTTTGCACAAGCCTGA MARRRFNYISDIQNTPGISLFSDGDIEKAFLDFFTDVYRGSSECDWMVDNLDWRPIDFAQA Homology
BLAST of Bhi12G002116 vs. NCBI nr
Match: KAA0055398.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99330.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 1.5e-09 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Bhi12G002116 vs. NCBI nr
Match: TYK10921.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of Bhi12G002116 vs. NCBI nr
Match: KAA0067709.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 4.6e-06 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Bhi12G002116 vs. NCBI nr
Match: KAA0041367.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.5 bits (145), Expect = 6.0e-06 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Bhi12G002116 vs. NCBI nr
Match: KAA0040038.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 7.8e-06 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
BLAST of Bhi12G002116 vs. ExPASy TrEMBL
Match: A0A5D3BHR2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005450 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.4e-10 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Bhi12G002116 vs. ExPASy TrEMBL
Match: A0A5D3CGJ3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G001050 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06 Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of Bhi12G002116 vs. ExPASy TrEMBL
Match: A0A5A7VRD2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00150 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-06 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Bhi12G002116 vs. ExPASy TrEMBL
Match: A0A5A7TI93 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00120 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.9e-06 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Bhi12G002116 vs. ExPASy TrEMBL
Match: A0A5D3DLM2 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00780 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.8e-06 Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|