Bhi04G001502 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G001502
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	40S ribosomal protein S8
Location	chr4: 47708535 .. 47710831 (+)
RNA-Seq Expression	Bhi04G001502
Synteny	Bhi04G001502

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACATTTAAGCCCATTAATCAGTCTGCACTCGAAACCCTAGTGTATCCTTCGGCCACATTTAAGCCCACAGTACTCGAAGCCCTAATGCATCCTTCTCCTTATATATATATAAGGACTCTTTTGCTGCACCCAGTCGTAGCCGCCGCCTCCCGATCGGCCGTCACGGTGAGGGTTCTTCCCCATTCGTCTATACTTCATCTCCCTCACCTCTCCCTCTATCCCTTTTCTATCTTTCACCTTTTCATAAGTTTAGGGTTTGAGTCTTGTTGTTTCTGTTAATAGGTTGCATCAGGAAAGTTAGAATTATTCGTGCAGGAGGTTTCATCTCGTCAATATGGGTAAGTGGTTTTTGGATTTTCATATATATCTTTGTATGTAACCTCGTTCTTGTTTCTTTTTTTTTTTTTTTTTCTCACTAATCCTGGAGGACTCTGTGGATAGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTAAGTACCTCTGCTTGTATTTATTTCTGTGCAATTTGACCGACCATTTTACTCGATTTCCCTAAATTAGTCGCGAACTGACCCACGGAAGATTCTGTAATTTTCCTCATTTATTTGTTGGTTTCTAGCACACAATGAGAATTTTGTAGGTTTAGCTTAACATTGATTTTTTTTTTTATTGGGCAGTCTTGATTTTATTGGCAATGATTTGTCATTTGTTTTCAAGTTTAACTAATCTGCGTTAGTATCTCATCTTCTCTGTTAGGTTGGTGTTCTTTTATTGAAAAAATTTCAGGTCGCTTAGAACATGTTCTCATTTTCAAATTTAATGAACCGTGTAATTGTTTTTATCTCTTACCGAAGAAGTAATGCATCGTCTTCCAATGTTGTTATGGCGCAGTTCGTACTATTAATTGTTGATGCTGATGCATAAGTAGAAATATAACCTTCTTTAGGCGTGTATGAGATATGGATACTGAAACTTAAATTATCACTGTTCATTTCCTTGTCGTGTATATATACAGCTCTCGTTTGCTGTGTGTTGTTTTTTAAGTCCTCGAGACATTGTTATTTGTGAAGGTATGAGCTTGGAAGGCAACCAGCCAACACTAAGTTATCGAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTATTCATGGGGTAGTGAGGCCGTGACTAGGAAAACCCGTATCCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGACTGCAGCATCTGCTAAGAAGGATGAGGTAGAGCAAGCTTTTTGTAGATTTACATATTGATATGGTTTATTCAAATCTCAAATATGAGTATTAATGTGTTAAAATTGTAAGTTCAATGGATATTGTAACAGCACTTATAATTGTTACATATAAACTAGAGCATGATCCATATGATAATTTGAGTTTTATGGTTTATAGGAAGGTGATGCTGCTGCCGCCGAAGAGGTGAAGAAGAGTAACCACGTTCAGCGTAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGGTAAGCATTGTGAAACCCTTTATGATTCTGATTTATTTACTGTTGTGTTCTTTCCAACTTGTGTTATATAGCACACTCATTGAAGGATTTTGTAGTCATTTTGCTGAGGTTTTGCAAATCTTTGGCAGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGATCCAGAGAAAGAAGGGAAAGGGTGCAGGTGCTGCTTAGTTTTTGTCGTTAAGATATTTGCTGGCCGTGTTCTCTTTTCTATGATTCTATCTGCCTTTTTTGTCTAATGAAGACGATAAGTTGTTGCAGCTAAAGATATTTATGAACTCCAATTTTGCTGTTATTAGTTTAATCACATTACTTTCTTTAGTCTGTTTCGTGATTATAACATTTTGTTTATTAGCTTAGAATTTTCTCGAGAACCCCAACTGTGTGCAAGCTTGGATTTAATTTAAGACCGCTCATCTTGTTCTAACCGAGTGTCTCACTTTTCCTCAGTTTTTGTCTGTTCTGTGATTCTCTCTTTTTCGTTCCT

mRNA sequence

CCCACATTTAAGCCCATTAATCAGTCTGCACTCGAAACCCTAGTGTATCCTTCGGCCACATTTAAGCCCACAGTACTCGAAGCCCTAATGCATCCTTCTCCTTATATATATATAAGGACTCTTTTGCTGCACCCAGTCGTAGCCGCCGCCTCCCGATCGGCCGTCACGGTTGCATCAGGAAAGTTAGAATTATTCGTGCAGGAGGTTTCATCTCGTCAATATGGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCCAACACTAAGTTATCGAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTATTCATGGGGTAGTGAGGCCGTGACTAGGAAAACCCGTATCCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGACTGCAGCATCTGCTAAGAAGGATGAGGAAGGTGATGCTGCTGCCGCCGAAGAGGTGAAGAAGAGTAACCACGTTCAGCGTAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGATCCAGAGAAAGAAGGGAAAGGGTGCAGGTGCTGCTTAGTTTTTGTCGTTAAGATATTTGCTGGCCGTGTTCTCTTTTCTATGATTCTATCTGCCTTTTTTGTCTAATGAAGACGATAAGTTGTTGCAGCTAAAGATATTTATGAACTCCAATTTTGCTGTTATTAGTTTAATCACATTACTTTCTTTAGTCTGTTTCGTGATTATAACATTTTGTTTATTAGCTTAGAATTTTCTCGAGAACCCCAACTGTGTGCAAGCTTGGATTTAATTTAAGACCGCTCATCTTGTTCTAACCGAGTGTCTCACTTTTCCTCAGTTTTTGTCTGTTCTGTGATTCTCTCTTTTTCGTTCCT

Coding sequence (CDS)

ATGGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCCAACACTAAGTTATCGAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTATTCATGGGGTAGTGAGGCCGTGACTAGGAAAACCCGTATCCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGACTGCAGCATCTGCTAAGAAGGATGAGGAAGGTGATGCTGCTGCCGCCGAAGAGGTGAAGAAGAGTAACCACGTTCAGCGTAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGATCCAGAGAAAGAAGGGAAAGGGTGCAGGTGCTGCTTAG

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA

Homology

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BLAST of Bhi04G001502 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 368.2 bits (944), Expect = 4.5e-102
Identity = 185/221 (83.71%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTAASAKKD----EEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 180
           ++GRKKK+A+S KKD    EE   AA EEVKKSNH+ RK+  RQEGR LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGA 218
           RL+ACISSRPGQCGRADGYILEGKELEFYMKKIQ+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Bhi04G001502 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 365.2 bits (936), Expect = 3.8e-101
Identity = 187/220 (85.00%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
           DIGRKKK          G+A   EEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           CI+SRPGQCGRADGYILEGKELEFYMKK+Q+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Bhi04G001502 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 195/221 (88.24%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGD--AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
           DIGRKKKT A+ K + EG    AAAEE KKSNHV RKLEKR+EGR LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGA 220
           +ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of Bhi04G001502 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 378.3 bits (970), Expect = 6.1e-104
Identity = 196/221 (88.69%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAA--EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
           DIGRKKK A +AKKD EG  A A  EE KKSNHV RKLEKRQ+GR LD HIEEQF SGRL
Sbjct: 121 DIGRKKK-APAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGA 220
           +ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of Bhi04G001502 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 8.8e-103
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
           +IGRKKKTAA+ K   E   A  EE KKSNHV  KLEKRQ+GR LD HIEEQF  G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           CISSRPGQCG+ADG ILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Bhi04G001502 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.3e-101
Identity = 185/221 (83.71%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTAASAKKD----EEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 180
           ++GRKKK+A+S KKD    EE   AA EEVKKSNH+ RK+  RQEGR LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGA 218
           RL+ACISSRPGQCGRADGYILEGKELEFYMKKIQ+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Bhi04G001502 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.4e-100
Identity = 187/220 (85.00%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
           DIGRKKK          G+A   EEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           CI+SRPGQCGRADGYILEGKELEFYMKK+Q+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Bhi04G001502 vs. ExPASy TrEMBL
Match: A0A5D3CAQ0 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00210 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
           DIGRKKKTAAS KKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA
Sbjct: 121 DIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           CISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Bhi04G001502 vs. ExPASy TrEMBL
Match: A0A1S3CRZ5 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103504075 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
           DIGRKKKTAAS KKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA
Sbjct: 121 DIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           CISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Bhi04G001502 vs. ExPASy TrEMBL
Match: A0A0A0KFT0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 217/222 (97.75%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGD--AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
           DIGRKKKTAASAKKDEEGD  AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           MACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]

BLAST of Bhi04G001502 vs. ExPASy TrEMBL
Match: A0A6J1K1I2 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.5e-113
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAA-EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLM 180
           DIGRKKKTAASAKK+EEGDAAAA EE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

[Close]

BLAST of Bhi04G001502 vs. ExPASy TrEMBL
Match: A0A6J1FIB1 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 7.5e-113
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTAASAKKDEEGDAAAA-EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLM 180
           DIGRKKKTAASAKK+EEGDAAAA EE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
           ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221

The following BLAST results are available for this feature:

BLAST of Bhi04G001502 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20290.1	4.5e-102	83.71	Ribosomal protein S8e family protein	[more]
AT5G59240.1	3.8e-101	85.00	Ribosomal protein S8e family protein	[more]

BLAST of Bhi04G001502 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08069	1.2e-104	88.24	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
P49199	6.1e-104	88.69	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
O81361	8.8e-103	86.36	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q93VG5	6.3e-101	83.71	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]
Q9FIF3	5.4e-100	85.00	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]

BLAST of Bhi04G001502 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CAQ0	3.2e-116	99.09	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRZ5	3.2e-116	99.09	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103504075 PE=3 SV=1	[more]
A0A0A0KFT0	1.4e-114	97.75	40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1	[more]
A0A6J1K1I2	7.5e-113	96.83	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1	[more]
A0A6J1FIB1	7.5e-113	96.83	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..197 e-value: 7.2E-56 score: 188.2
None	No IPR available	GENE3D	3.10.290.70		coord: 163..215 e-value: 9.3E-18 score: 66.6 coord: 32..162 e-value: 1.4E-39 score: 136.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..167
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..218
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..197 e-value: 8.38359E-58 score: 177.327
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..199 e-value: 1.9E-46 score: 155.3
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..218
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001502	Bhi04M001502	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome