Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCACATTTAAGCCCATTAATCAGTCTGCACTCGAAACCCTAGTGTATCCTTCGGCCACATTTAAGCCCACAGTACTCGAAGCCCTAATGCATCCTTCTCCTTATATATATATAAGGACTCTTTTGCTGCACCCAGTCGTAGCCGCCGCCTCCCGATCGGCCGTCACGGTGAGGGTTCTTCCCCATTCGTCTATACTTCATCTCCCTCACCTCTCCCTCTATCCCTTTTCTATCTTTCACCTTTTCATAAGTTTAGGGTTTGAGTCTTGTTGTTTCTGTTAATAGGTTGCATCAGGAAAGTTAGAATTATTCGTGCAGGAGGTTTCATCTCGTCAATATGGGTAAGTGGTTTTTGGATTTTCATATATATCTTTGTATGTAACCTCGTTCTTGTTTCTTTTTTTTTTTTTTTTTCTCACTAATCCTGGAGGACTCTGTGGATAGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTAAGTACCTCTGCTTGTATTTATTTCTGTGCAATTTGACCGACCATTTTACTCGATTTCCCTAAATTAGTCGCGAACTGACCCACGGAAGATTCTGTAATTTTCCTCATTTATTTGTTGGTTTCTAGCACACAATGAGAATTTTGTAGGTTTAGCTTAACATTGATTTTTTTTTTTATTGGGCAGTCTTGATTTTATTGGCAATGATTTGTCATTTGTTTTCAAGTTTAACTAATCTGCGTTAGTATCTCATCTTCTCTGTTAGGTTGGTGTTCTTTTATTGAAAAAATTTCAGGTCGCTTAGAACATGTTCTCATTTTCAAATTTAATGAACCGTGTAATTGTTTTTATCTCTTACCGAAGAAGTAATGCATCGTCTTCCAATGTTGTTATGGCGCAGTTCGTACTATTAATTGTTGATGCTGATGCATAAGTAGAAATATAACCTTCTTTAGGCGTGTATGAGATATGGATACTGAAACTTAAATTATCACTGTTCATTTCCTTGTCGTGTATATATACAGCTCTCGTTTGCTGTGTGTTGTTTTTTAAGTCCTCGAGACATTGTTATTTGTGAAGGTATGAGCTTGGAAGGCAACCAGCCAACACTAAGTTATCGAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTATTCATGGGGTAGTGAGGCCGTGACTAGGAAAACCCGTATCCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGACTGCAGCATCTGCTAAGAAGGATGAGGTAGAGCAAGCTTTTTGTAGATTTACATATTGATATGGTTTATTCAAATCTCAAATATGAGTATTAATGTGTTAAAATTGTAAGTTCAATGGATATTGTAACAGCACTTATAATTGTTACATATAAACTAGAGCATGATCCATATGATAATTTGAGTTTTATGGTTTATAGGAAGGTGATGCTGCTGCCGCCGAAGAGGTGAAGAAGAGTAACCACGTTCAGCGTAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGGTAAGCATTGTGAAACCCTTTATGATTCTGATTTATTTACTGTTGTGTTCTTTCCAACTTGTGTTATATAGCACACTCATTGAAGGATTTTGTAGTCATTTTGCTGAGGTTTTGCAAATCTTTGGCAGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGATCCAGAGAAAGAAGGGAAAGGGTGCAGGTGCTGCTTAGTTTTTGTCGTTAAGATATTTGCTGGCCGTGTTCTCTTTTCTATGATTCTATCTGCCTTTTTTGTCTAATGAAGACGATAAGTTGTTGCAGCTAAAGATATTTATGAACTCCAATTTTGCTGTTATTAGTTTAATCACATTACTTTCTTTAGTCTGTTTCGTGATTATAACATTTTGTTTATTAGCTTAGAATTTTCTCGAGAACCCCAACTGTGTGCAAGCTTGGATTTAATTTAAGACCGCTCATCTTGTTCTAACCGAGTGTCTCACTTTTCCTCAGTTTTTGTCTGTTCTGTGATTCTCTCTTTTTCGTTCCT
mRNA sequence
CCCACATTTAAGCCCATTAATCAGTCTGCACTCGAAACCCTAGTGTATCCTTCGGCCACATTTAAGCCCACAGTACTCGAAGCCCTAATGCATCCTTCTCCTTATATATATATAAGGACTCTTTTGCTGCACCCAGTCGTAGCCGCCGCCTCCCGATCGGCCGTCACGGTTGCATCAGGAAAGTTAGAATTATTCGTGCAGGAGGTTTCATCTCGTCAATATGGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCCAACACTAAGTTATCGAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTATTCATGGGGTAGTGAGGCCGTGACTAGGAAAACCCGTATCCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGACTGCAGCATCTGCTAAGAAGGATGAGGAAGGTGATGCTGCTGCCGCCGAAGAGGTGAAGAAGAGTAACCACGTTCAGCGTAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGATCCAGAGAAAGAAGGGAAAGGGTGCAGGTGCTGCTTAGTTTTTGTCGTTAAGATATTTGCTGGCCGTGTTCTCTTTTCTATGATTCTATCTGCCTTTTTTGTCTAATGAAGACGATAAGTTGTTGCAGCTAAAGATATTTATGAACTCCAATTTTGCTGTTATTAGTTTAATCACATTACTTTCTTTAGTCTGTTTCGTGATTATAACATTTTGTTTATTAGCTTAGAATTTTCTCGAGAACCCCAACTGTGTGCAAGCTTGGATTTAATTTAAGACCGCTCATCTTGTTCTAACCGAGTGTCTCACTTTTCCTCAGTTTTTGTCTGTTCTGTGATTCTCTCTTTTTCGTTCCT
Coding sequence (CDS)
ATGGGTATCTCTCGAGATTCTATGCACAAGAGGCGTGCAACTGGAGGGAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCCAACACTAAGTTATCGAGCGACAAGTCAATCAGGAGGATTCGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTATTCATGGGGTAGTGAGGCCGTGACTAGGAAAACCCGTATCCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTATCTTCAGCACTACGGAGTGGATATTGGAAGGAAGAAGAAGACTGCAGCATCTGCTAAGAAGGATGAGGAAGGTGATGCTGCTGCCGCCGAAGAGGTGAAGAAGAGTAACCACGTTCAGCGTAAGCTGGAGAAACGTCAAGAGGGTCGTAAGCTTGACCCACATATTGAAGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATTTCATCAAGACCAGGTCAATGTGGTCGAGCAGATGGATATATCTTGGAGGGCAAAGAACTTGAATTCTACATGAAGAAGATCCAGAGAAAGAAGGGAAAGGGTGCAGGTGCTGCTTAG
Protein sequence
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA
Homology
BLAST of Bhi04M001502 vs. TAIR 10
Match:
AT5G20290.1 (Ribosomal protein S8e family protein )
HSP 1 Score: 368.2 bits (944), Expect = 4.5e-102
Identity = 185/221 (83.71%), Postives = 203/221 (91.86%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 121 DIGRKKKTAASAKKD----EEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 180
++GRKKK+A+S KKD EE AA EEVKKSNH+ RK+ RQEGR LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180
Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGA 218
RL+ACISSRPGQCGRADGYILEGKELEFYMKKIQ+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221
BLAST of Bhi04M001502 vs. TAIR 10
Match:
AT5G59240.1 (Ribosomal protein S8e family protein )
HSP 1 Score: 365.2 bits (936), Expect = 3.8e-101
Identity = 187/220 (85.00%), Postives = 199/220 (90.45%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
DIGRKKK G+A EEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180
Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
CI+SRPGQCGRADGYILEGKELEFYMKK+Q+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210
BLAST of Bhi04M001502 vs. ExPASy Swiss-Prot
Match:
Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)
HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 195/221 (88.24%), Postives = 205/221 (92.76%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGD--AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
DIGRKKKT A+ K + EG AAAEE KKSNHV RKLEKR+EGR LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180
Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGA 220
+ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221
BLAST of Bhi04M001502 vs. ExPASy Swiss-Prot
Match:
P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)
HSP 1 Score: 378.3 bits (970), Expect = 6.1e-104
Identity = 196/221 (88.69%), Postives = 205/221 (92.76%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAA--EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
DIGRKKK A +AKKD EG A A EE KKSNHV RKLEKRQ+GR LD HIEEQF SGRL
Sbjct: 121 DIGRKKK-APAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180
Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGA 220
+ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220
BLAST of Bhi04M001502 vs. ExPASy Swiss-Prot
Match:
O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)
HSP 1 Score: 374.4 bits (960), Expect = 8.8e-103
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
+IGRKKKTAA+ K E A EE KKSNHV KLEKRQ+GR LD HIEEQF G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180
Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
CISSRPGQCG+ADG ILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220
BLAST of Bhi04M001502 vs. ExPASy Swiss-Prot
Match:
Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)
HSP 1 Score: 368.2 bits (944), Expect = 6.3e-101
Identity = 185/221 (83.71%), Postives = 203/221 (91.86%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 121 DIGRKKKTAASAKKD----EEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSG 180
++GRKKK+A+S KKD EE AA EEVKKSNH+ RK+ RQEGR LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180
Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGA 218
RL+ACISSRPGQCGRADGYILEGKELEFYMKKIQ+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221
BLAST of Bhi04M001502 vs. ExPASy Swiss-Prot
Match:
Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)
HSP 1 Score: 365.2 bits (936), Expect = 5.4e-100
Identity = 187/220 (85.00%), Postives = 199/220 (90.45%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
DIGRKKK G+A EEVKKSNHVQRKLE RQEGR LD H+EEQFSSGRL+A
Sbjct: 121 DIGRKKK----------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLA 180
Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
CI+SRPGQCGRADGYILEGKELEFYMKK+Q+KKGK AGAA
Sbjct: 181 CIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210
BLAST of Bhi04M001502 vs. ExPASy TrEMBL
Match:
A0A5D3CAQ0 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00210 PE=3 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
DIGRKKKTAAS KKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA
Sbjct: 121 DIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
CISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
BLAST of Bhi04M001502 vs. ExPASy TrEMBL
Match:
A0A1S3CRZ5 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103504075 PE=3 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
DIGRKKKTAAS KKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA
Sbjct: 121 DIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180
Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
CISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
BLAST of Bhi04M001502 vs. ExPASy TrEMBL
Match:
A0A0A0KFT0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1)
HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 217/222 (97.75%), Postives = 220/222 (99.10%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGD--AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
DIGRKKKTAASAKKDEEGD AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180
Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
MACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
BLAST of Bhi04M001502 vs. ExPASy TrEMBL
Match:
A0A6J1K1I2 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1)
HSP 1 Score: 416.4 bits (1069), Expect = 7.5e-113
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAA-EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLM 180
DIGRKKKTAASAKK+EEGDAAAA EE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180
Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221
BLAST of Bhi04M001502 vs. ExPASy TrEMBL
Match:
A0A6J1FIB1 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1)
HSP 1 Score: 416.4 bits (1069), Expect = 7.5e-113
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKTAASAKKDEEGDAAAA-EEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLM 180
DIGRKKKTAASAKK+EEGDAAAA EE KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASAKKEEEGDAAAATEEAKKSNHVQRKLEKRQQERKLDPHIEEQFSSGRLM 180
Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 221
ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 221
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT5G20290.1 | 4.5e-102 | 83.71 | Ribosomal protein S8e family protein | [more] |
AT5G59240.1 | 3.8e-101 | 85.00 | Ribosomal protein S8e family protein | [more] |
Match Name | E-value | Identity | Description | |
Q08069 | 1.2e-104 | 88.24 | 40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2 | [more] |
P49199 | 6.1e-104 | 88.69 | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S... | [more] |
O81361 | 8.8e-103 | 86.36 | 40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1 | [more] |
Q93VG5 | 6.3e-101 | 83.71 | 40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1 | [more] |
Q9FIF3 | 5.4e-100 | 85.00 | 40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CAQ0 | 3.2e-116 | 99.09 | 40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A1S3CRZ5 | 3.2e-116 | 99.09 | 40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103504075 PE=3 SV=1 | [more] |
A0A0A0KFT0 | 1.4e-114 | 97.75 | 40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_6G382970 PE=3 SV=1 | [more] |
A0A6J1K1I2 | 7.5e-113 | 96.83 | 40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111489780 PE=3 SV=1 | [more] |
A0A6J1FIB1 | 7.5e-113 | 96.83 | 40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111445587 PE=3 SV=1 | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi04M001502.utr5p1 | Bhi04M001502.utr5p1 | five_prime_UTR |
Bhi04M001502.utr5p2 | Bhi04M001502.utr5p2 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi04M001502.exon1 | Bhi04M001502.exon1 | exon |
Bhi04M001502.exon2 | Bhi04M001502.exon2 | exon |
Bhi04M001502.exon3 | Bhi04M001502.exon3 | exon |
Bhi04M001502.exon4 | Bhi04M001502.exon4 | exon |
Bhi04M001502.exon5 | Bhi04M001502.exon5 | exon |
Bhi04M001502.exon6 | Bhi04M001502.exon6 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
cds.Bhi04M001502 | cds.Bhi04M001502 | CDS |
cds.Bhi04M001502 | cds.Bhi04M001502_2 | CDS |
cds.Bhi04M001502 | cds.Bhi04M001502_3 | CDS |
cds.Bhi04M001502 | cds.Bhi04M001502_4 | CDS |
cds.Bhi04M001502 | cds.Bhi04M001502_5 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Bhi04M001502.utr3p1 | Bhi04M001502.utr3p1 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Bhi04M001502 | Bhi04M001502-protein | polypeptide |