Cla97C03G051060 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G051060
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Methyltransferase-related protein, putative
Location	Cla97Chr03 : 266070 .. 266406 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTCCAGGCCGACGATAATTCCGATACTCACTCCAAGGATTTGGATTCCAATTCCTCCTCCAAGGTTCTTCTAATTCTTTTTCATCCCAATCTTTCATTTCCTTGTTGTTTCTTTGTTTGTGTCTGAATGGAATGATTGGTGTATGTTTGAACAGGTCTCATCGGGGTTCTGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGGCTTCCAATTGA

mRNA sequence

ATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTCCAGGCCGACGATAATTCCGATACTCACTCCAAGGATTTGGATTCCAATTCCTCCTCCAAGGTCTCATCGGGGTTCTGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGGCTTCCAATTGA

Coding sequence (CDS)

ATGTGTCCGCTCAGATTTATTCTCATATTTCTCTCAGCCACTCTCGCCGGCTTCTTCCTTCTCCGGAACCTCAAATCTCACCCTCAACATTTCCAGGCCGACGATAATTCCGATACTCACTCCAAGGATTTGGATTCCAATTCCTCCTCCAAGGTCTCATCGGGGTTCTGGATGGTGGTCGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTTCCTCGTCGGAGAAGGCTTCCAATTGA

Protein sequence

MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSSSKVSSGFWMVVDMASGRYLWRHLFSSSEKASN

Homology

[Close]

BLAST of Cla97C03G051060 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 3.0e-25
Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 60
          MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD  SK+LDS+ S   SKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 MVVDMASGRYLWRHLFSSSEKASN 82
           VVDMASGRYLWRHLF SS+K S+
Sbjct: 61 TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of Cla97C03G051060 vs. NCBI nr
Match: KGN63886.1 (hypothetical protein Csa_1G025180 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 4.3e-24
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 60
          MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD +S + DS+ S   SKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 MVVDMASGRYLWRHLFSSSEKASN 82
           +VDMASGRYLWRHLF SS+K S+
Sbjct: 61 TLVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of Cla97C03G051060 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-21
Identity = 59/86 (68.60%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHS-----KDLDSNSSSKVSSG 60
          MCPLRFILIFLSATLAGFF+LRNLKS PQ F+ADDNSD HS               + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSDAHSXXXXXXXXXXXXXXAMQSG 60

Query: 61 FWMVVDMASGRYLWRHLFSSSEKASN 82
          FW VVDMASGRYLWRHLF SS+K S+
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSQKRSD 86

[Close]

BLAST of Cla97C03G051060 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima])

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-21
Identity = 58/86 (67.44%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1   MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHS-----KDLDSNSSSKVSSG 60
           MCPLRFILIFLSATLAGFF+LRNLKS PQ F+AD+NSD HS               + SG
Sbjct: 68  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADENSDAHSXXXXXXXXXXXXXXAMQSG 127

Query: 61  FWMVVDMASGRYLWRHLFSSSEKASN 82
           FW VVDMASGRYLWRHLF SS+K S+
Sbjct: 128 FWTVVDMASGRYLWRHLFPSSQKRSD 153

[Close]

BLAST of Cla97C03G051060 vs. NCBI nr
Match: XP_023519406.1 (uncharacterized protein LOC111782825 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.9 bits (263), Expect = 6.5e-20
Identity = 58/94 (61.70%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTH-------------SKDLDSN 60
          MCPLRFILIFLSATLAGFF+LRNLKS PQ F+ADDNS+TH                    
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSETHXXXXXXXXXXXXXXXXXXXX 60

Query: 61 SSSKVSSGFWMVVDMASGRYLWRHLFSSSEKASN 82
              + SGFW VVDMASGRYLWRHL  SS+K SN
Sbjct: 61 XXXAMQSGFWTVVDMASGRYLWRHLMPSSKKPSN 94

[Close]

BLAST of Cla97C03G051060 vs. TrEMBL
Match: tr|A0A1S3BWD8|A0A1S3BWD8_CUCME (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-25
Identity = 66/84 (78.57%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 60
          MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD  SK+LDS+ S   SKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 MVVDMASGRYLWRHLFSSSEKASN 82
           VVDMASGRYLWRHLF SS+K S+
Sbjct: 61 TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of Cla97C03G051060 vs. TrEMBL
Match: tr|A0A0A0LV42|A0A0A0LV42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-24
Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS---SKVSSGFW 60
          MCPLRFILIFLSATLAGFF+LRNLKS PQ F A DNSD +S + DS+ S   SKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 MVVDMASGRYLWRHLFSSSEKASN 82
           +VDMASGRYLWRHLF SS+K S+
Sbjct: 61 TLVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of Cla97C03G051060 vs. TrEMBL
Match: tr|A0A0A0LVB2|A0A0A0LVB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.6e-20
Identity = 59/83 (71.08%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSSSKVSSGFWMVV 60
          MCPLR ILIFLSATLAGF L+RNLKS  Q F ADD++   S    S +S+K+SSGFW VV
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHT-FDSNSSSSPNSNKISSGFWTVV 60

Query: 61 DMASGRYLWRHLF--SSSEKASN 82
          DMASGRYLWRHLF  SSSEKAS+
Sbjct: 61 DMASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of Cla97C03G051060 vs. TrEMBL
Match: tr|A0A0B0PSD8|A0A0B0PSD8_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_11724 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-17
Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS-----SKVSSG 60
          MCPLR ILIFLSATLAGFFLLRN+KSHP   Q DD+  T   + +S+S+     + + SG
Sbjct: 1  MCPLRLILIFLSATLAGFFLLRNIKSHP---QTDDDDHTRPNNXNSHSAFSKVWAAIESG 60

Query: 61 FWMVVDMASGRYLWRHLFSSSEKASN 82
          FW  +DMASGRYLWRHL SS+ K S+
Sbjct: 61 FWASLDMASGRYLWRHLVSSNSKPSS 83

[Close]

BLAST of Cla97C03G051060 vs. TrEMBL
Match: tr|A0A2P5XX48|A0A2P5XX48_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12714 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-17
Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSSS-------KVS 60
          MCPLR ILIFLSATLAGFFLLRN+KSHPQ      N D H++  ++NS S        + 
Sbjct: 1  MCPLRLILIFLSATLAGFFLLRNIKSHPQ-----TNDDDHTRPNNNNSHSAFSKVWAAIE 60

Query: 61 SGFWMVVDMASGRYLWRHLFSSSEKASN 82
          SGFW  +DMASGRYLWRHL SS+ K S+
Sbjct: 61 SGFWASLDMASGRYLWRHLVSSNSKPSS 83

[Close]

BLAST of Cla97C03G051060 vs. TAIR10
Match: AT5G58375.1 (Methyltransferase-related protein)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-14
Identity = 47/85 (55.29%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSS-SKV----SSG 60
          MCPLR ILIFLSATLAGFF+L+ L S       D  +D    D DS S  SKV     SG
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVSGFSKVGMAMKSG 60

Query: 61 FWMVVDMASGRYLWRHLFSSSEKAS 81
          FW  VDMASGRYLW +L S+++++S
Sbjct: 61 FWTCVDMASGRYLWNNLCSNAKRSS 85

[Close]

BLAST of Cla97C03G051060 vs. TAIR10
Match: AT5G18150.1 (Methyltransferase-related protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDSNSSSKVSSGFWMVV 60
          MCP+RF+L+F SA LAG+F  + + S P+     D+ D  ++  + N   K+ +GFW+ V
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPEF----DSPDELNEKQELNLKKKMENGFWVFV 60

Query: 61 DMASGRYLWRHLFSSSEKA 80
          DMASGRYLWR+L    EK+
Sbjct: 61 DMASGRYLWRNLKEMREKS 75

[Close]

BLAST of Cla97C03G051060 vs. TAIR10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 63.5 bits (153), Expect = 6.7e-11
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFLLRNLKSHPQHFQADDNSDTHSKDLDS-NSSSKVSSGFWMV 60
          MCPLRF+L+F SA LAG+   R + S P+ F +D+     +K+    +   K+ +G W  
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELF-SDELLQAEAKEKQGLDFKRKMDNGLWTF 60

Query: 61 VDMASGRYLWRHL 73
          VDMASGRYLWR+L
Sbjct: 61 VDMASGRYLWRNL 72

The following BLAST results are available for this feature:

BLAST of Cla97C03G051060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453499.1	3.0e-25	78.57	PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]	[more]
KGN63886.1	4.3e-24	75.00	hypothetical protein Csa_1G025180 [Cucumis sativus]	[more]
XP_023525661.1	1.5e-21	68.60	uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]	[more]
XP_022997733.1	4.5e-21	67.44	uncharacterized protein LOC111492605 [Cucurbita maxima]	[more]
XP_023519406.1	6.5e-20	61.70	uncharacterized protein LOC111782825 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C03G051060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWD8\|A0A1S3BWD8_CUCME	2.0e-25	78.57	uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=...	[more]
tr\|A0A0A0LV42\|A0A0A0LV42_CUCSA	2.9e-24	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1	[more]
tr\|A0A0A0LVB2\|A0A0A0LVB2_CUCSA	9.6e-20	71.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1	[more]
tr\|A0A0B0PSD8\|A0A0B0PSD8_GOSAR	2.6e-17	60.47	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_11724 PE=4 SV=1	[more]
tr\|A0A2P5XX48\|A0A2P5XX48_GOSBA	2.6e-17	60.23	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12714 PE=4 SV...	[more]

BLAST of Cla97C03G051060 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C03G051060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58375.1	1.3e-14	55.29	Methyltransferase-related protein	[more]
AT5G18150.1	1.4e-13	45.57	Methyltransferase-related protein	[more]
AT5G14602.1	6.7e-11	46.58	FUNCTIONS IN: molecular_function unknown	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G051060.1	Cla97C03G051060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..45
None	No IPR available	PANTHER	PTHR34132	FAMILY NOT NAMED	coord: 1..79

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G051060	Cla008117	Watermelon (97103) v1	wmwmbB124
Cla97C03G051060	Csa1G533620	Cucumber (Chinese Long) v2	cuwmbB043
Cla97C03G051060	MELO3C020504	Melon (DHL92) v3.5.1	mewmbB153
Cla97C03G051060	ClCG03G000250	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G051060	CSPI01G24360	Wild cucumber (PI 183967)	cpiwmbB044
Cla97C03G051060	Cucsa.111670	Cucumber (Gy14) v1	cgywmbB153
Cla97C03G051060	Cucsa.151950	Cucumber (Gy14) v1	cgywmbB257
Cla97C03G051060	CmaCh13G000170	Cucurbita maxima (Rimu)	cmawmbB231
Cla97C03G051060	CmaCh01G007230	Cucurbita maxima (Rimu)	cmawmbB462
Cla97C03G051060	CmoCh13G000080	Cucurbita moschata (Rifu)	cmowmbB215
Cla97C03G051060	Lsi02G012290	Bottle gourd (USVL1VR-Ls)	lsiwmbB177
Cla97C03G051060	CsGy1G004360	Cucumber (Gy14) v2	cgybwmbB047
Cla97C03G051060	CsGy1G023850	Cucumber (Gy14) v2	cgybwmbB042
Cla97C03G051060	Carg26962	Silver-seed gourd	carwmbB0338
Cla97C03G051060	Carg07020	Silver-seed gourd	carwmbB0547
Cla97C03G051060	CsaV3_1G036660	Cucumber (Chinese Long) v3	cucwmbB042
Cla97C03G051060	Bhi08G000366	Wax gourd	wgowmbB470

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G051060	Wax gourd	wgowmbB384
Cla97C03G051060	Silver-seed gourd	carwmbB0545
Cla97C03G051060	Cucurbita maxima (Rimu)	cmawmbB225
Cla97C03G051060	Cucurbita moschata (Rifu)	cmowmbB209
Cla97C03G051060	Melon (DHL92) v3.6.1	medwmbB142