CsGy1G004360 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCAAGAAAATATCAATGTTAGTTAACAAGTTTGTTCAATTTTAGTTTCTATTAACCTTTTTAGTATTAATAATAGTTGTCTATTATGGTCTTTAAATACCATTTTGCTAGTTTTGGAAAGACTCATTTTTCTTAATTTTAACCCTTATTCTTTTTTTTTTTTTTTCCAAGCAGCCATCCACCATTATAATATATTATAATAAAGTAGTCTACTTTAGTTTATTTTTGCATAAAAAATTGAGCTTGTGGCATTGTGGGTTATCACTAACCAAATCTTTAACCTTATCTGATTATTAATATTATTTGTCTTTGACATCTCATTCATTTAATTATTCATAAGAAATGATAGAAAATGAGTGGTTAGGTTAGGTGGAAAAACAAGCAAACTCCATATTCAATTCCCCAATTTTTCTATACCCAATTTTGACAATTCCTTCCCTTCCTTTGATTTTACCCTAAAAATTCTCTCTCATTATTCAGATCCAGAGGTTAGAGAAAGAAGTAGAAGAAGAACAAAAAAATTATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCAGACGATAACTCCAACGAATTCGATTCCTCCGATTCGTCCTCCTGCTCGAAGGTTCTTCTAATTGTTCTTCACCGGAATCTTGCATTTTCTTTTTCTTTGTTTGTGTCTGAATGGAATTATTGTGGTGGTTTGTTTGAACAGGTGTCTTCGGGGTTCTGGACGTTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCATCGTCGAAGAAGCCTTCCGACTGACGATACGATGTCGGACTTGCGAGTGCTCCGACGGCCTAGGGCTCTCACCTTCTTCTGTTGTATGAATAATAATTATCTCTTTTTCCCTTCCCACCTTCGAGTAGATTTTGTAAAATTCCTCTTCTGCTTCATATCCAGCATCGTCGTTAACATCTAAATCTGTATAATGTAATCAAAATACGTGGATTGAACAACGTTTTGTGGATTCGATTTGTGATACAAAATTTTCTAACACTCGGCTCCCTGATTTCCATTAATCTTCGTTTCAACTTGGAGTTAGTTTTGAATAGGAATTGATTACCCTTTTACAAGAAAAAAAATACATACATTTGTATTATTGATTTCTCTATAAAAACCAATTAAAATATACAAAAAAATCATTTTGACAAATTCTCAAACTCTTTATTTTGATCTCAAATTAATTAAATTTAAATTATACACTTGAAATTGAAAATGGATTACACTTCAATGC AAATCAAGAAAATATCAATGTTAGTTAACAAGTTTGTTCAATTTTAGTTTCTATTAACCTTTTTAGTATTAATAATAGTTGTCTATTATGGTCTTTAAATACCATTTTGCTAGTTTTGGAAAGACTCATTTTTCTTAATTTTAACCCTTATTCTTTTTTTTTTTTTTTCCAAGCAGCCATCCACCATTATAATATATTATAATAAAGTAGTCTACTTTAGTTTATTTTTGCATAAAAAATTGAGCTTGTGGCATTGTGGGTTATCACTAACCAAATCTTTAACCTTATCTGATTATTAATATTATTTGTCTTTGACATCTCATTCATTTAATTATTCATAAGAAATGATAGAAAATGAGTGGTTAGGTTAGGTGGAAAAACAAGCAAACTCCATATTCAATTCCCCAATTTTTCTATACCCAATTTTGACAATTCCTTCCCTTCCTTTGATTTTACCCTAAAAATTCTCTCTCATTATTCAGATCCAGAGGTTAGAGAAAGAAGTAGAAGAAGAACAAAAAAATTATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCAGACGATAACTCCAACGAATTCGATTCCTCCGATTCGTCCTCCTGCTCGAAGGTGTCTTCGGGGTTCTGGACGTTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCATCGTCGAAGAAGCCTTCCGACTGACGATACGATGTCGGACTTGCGAGTGCTCCGACGGCCTAGGGCTCTCACCTTCTTCTGTTGTATGAATAATAATTATCTCTTTTTCCCTTCCCACCTTCGAGTAGATTTTGTAAAATTCCTCTTCTGCTTCATATCCAGCATCGTCGTTAACATCTAAATCTGTATAATGTAATCAAAATACGTGGATTGAACAACGTTTTGTGGATTCGATTTGTGATACAAAATTTTCTAACACTCGGCTCCCTGATTTCCATTAATCTTCGTTTCAACTTGGAGTTAGTTTTGAATAGGAATTGATTACCCTTTTACAAGAAAAAAAATACATACATTTGTATTATTGATTTCTCTATAAAAACCAATTAAAATATACAAAAAAATCATTTTGACAAATTCTCAAACTCTTTATTTTGATCTCAAATTAATTAAATTTAAATTATACACTTGAAATTGAAAATGGATTACACTTCAATGC ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCAGACGATAACTCCAACGAATTCGATTCCTCCGATTCGTCCTCCTGCTCGAAGGTGTCTTCGGGGTTCTGGACGTTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCATCGTCGAAGAAGCCTTCCGACTGA MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFWTLVDMASGRYLWRHLFPSSKKPSD
BLAST of CsGy1G004360 vs. NCBI nr
Match: KGN63886.1 (hypothetical protein Csa_1G025180 [Cucumis sativus]) HSP 1 Score: 168.7 bits (426), Expect = 8.4e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsGy1G004360 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]) HSP 1 Score: 159.8 bits (403), Expect = 3.9e-36 Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of CsGy1G004360 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22 Identity = 62/86 (72.09%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of CsGy1G004360 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima]) HSP 1 Score: 112.5 bits (280), Expect = 7.2e-22 Identity = 61/86 (70.93%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of CsGy1G004360 vs. NCBI nr
Match: XP_023519406.1 (uncharacterized protein LOC111782825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20 Identity = 60/94 (63.83%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of CsGy1G004360 vs. TAIR10
Match: AT5G58375.1 (Methyltransferase-related protein) HSP 1 Score: 78.6 bits (192), Expect = 2.1e-15 Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of CsGy1G004360 vs. TAIR10
Match: AT5G18150.1 (Methyltransferase-related protein) HSP 1 Score: 65.1 bits (157), Expect = 2.4e-11 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of CsGy1G004360 vs. TAIR10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 61.2 bits (147), Expect = 3.4e-10 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of CsGy1G004360 vs. TrEMBL
Match: tr|A0A0A0LV42|A0A0A0LV42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 5.6e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsGy1G004360 vs. TrEMBL
Match: tr|A0A1S3BWD8|A0A1S3BWD8_CUCME (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-36 Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0
BLAST of CsGy1G004360 vs. TrEMBL
Match: tr|A0A0A0LVB2|A0A0A0LVB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.9e-19 Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of CsGy1G004360 vs. TrEMBL
Match: tr|D7SJL0|D7SJL0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07850 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.4e-18 Identity = 59/88 (67.05%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of CsGy1G004360 vs. TrEMBL
Match: tr|W9SAE2|W9SAE2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010690 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.9e-18 Identity = 57/94 (60.64%), Postives = 66/94 (70.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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