MELO3C017370.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C017370.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMethyltransferase-related protein, putative
Locationchr02 : 23926405 .. 23927516 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTCTATTGCAGTCTATCACGCTATTTTGCTAATTTTGTAAGTAAGATAGACTCAATTTTCTTTATTTTAACCTTTCAATTCTTTTTTCCAAGCAGCCATCCATCATTATAATATATTATAATATAGTAGTCTACTTTTCTTTTTTTTCTCTTGCATAAAATATTAAGCTTGTGGCATCGTGGGTTATCACTAACCAAATCTTTAACCTTATCTGATTATTAATATTATTTGTCTTTGACATCCCATTCATTTAATTATTCATAAGAAATGATAGAAAATGAGTGGTTAGGTTAGGTGGAAAAACAAGCAAACTCCAATTTCATTTCCCCAATTTTCTAAACCCAATTTTGACAATTCCTTCCCCTTCCTTTGATTTTACCCTAAAAATTCTCCCTCTTAATTCAGATCCAGAGGTTAGAGAAAGAAGTAGAAGAAAAACAAAACAAAAAGAAAAAAAATTATGTGTCCGTTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCCGACGATAGCTCCAAGGAATTAGATTCCTCCGATTCGACCTCCTGCTCAAAGGTTCTTCTAATTGTTCTTCATCGGAATCTTGCATTTTCTTTTCTTTTTCTTCGTTTGTGTCTGAATGGAATGATTGTGGTGGTTGTTTGAACAGGTGTCTTCGGGGTTCTGGACGGTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCGTCGTCGAAGAAGCCTTCCGATTGACGTTTCGGCGGCGGCCTAGGGCTCACGTTCTTCTGTTGTATGATTAATAATTCTCTCTTTTTCCCTTCCCATCTTCGAGTAGATTTTGTAAAATTCTTCTTCTGCTTCATATCCAACATTGTCGTTAACATCTAAATCTGTACAATGTAACCAAAATACGTGGATTGAACAACGTTTTGTGGATTCGATTTGTGATGCAAAATTTTCTAACACTCGGCTCCTTGATTTCCATTAATCTTCATTCCAACTGGGAGTCAGTTTTGAATAGAAATTGATACCCTTTTCCAAAAAATACATACA

mRNA sequence

ATTGTCTATTGCAGTCTATCACGCTATTTTGCTAATTTTGTAAGTAAGATAGACTCAATTTTCTTTATTTTAACCTTTCAATTCTTTTTTCCAAGCAGCCATCCATCATTATAATATATTATAATATAGTAGTCTACTTTTCTTTTTTTTCTCTTGCATAAAATATTAAGCTTGTGGCATCGTGGGTTATCACTAACCAAATCTTTAACCTTATCTGATTATTAATATTATTTGTCTTTGACATCCCATTCATTTAATTATTCATAAGAAATGATAGAAAATGAGTGGTTAGGTTAGGTGGAAAAACAAGCAAACTCCAATTTCATTTCCCCAATTTTCTAAACCCAATTTTGACAATTCCTTCCCCTTCCTTTGATTTTACCCTAAAAATTCTCCCTCTTAATTCAGATCCAGAGGTTAGAGAAAGAAGTAGAAGAAAAACAAAACAAAAAGAAAAAAAATTATGTGTCCGTTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCCGACGATAGCTCCAAGGAATTAGATTCCTCCGATTCGACCTCCTGCTCAAAGGTGTCTTCGGGGTTCTGGACGGTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCGTCGTCGAAGAAGCCTTCCGATTGACGTTTCGGCGGCGGCCTAGGGCTCACGTTCTTCTGTTGTATGATTAATAATTCTCTCTTTTTCCCTTCCCATCTTCGAGTAGATTTTGTAAAATTCTTCTTCTGCTTCATATCCAACATTGTCGTTAACATCTAAATCTGTACAATGTAACCAAAATACGTGGATTGAACAACGTTTTGTGGATTCGATTTGTGATGCAAAATTTTCTAACACTCGGCTCCTTGATTTCCATTAATCTTCATTCCAACTGGGAGTCAGTTTTGAATAGAAATTGATACCCTTTTCCAAAAAATACATACA

Coding sequence (CDS)

ATGTGTCCGTTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCCGACGATAGCTCCAAGGAATTAGATTCCTCCGATTCGACCTCCTGCTCAAAGGTGTCTTCGGGGTTCTGGACGGTGGTGGATATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCGTCGTCGAAGAAGCCTTCCGATTGA

Protein sequence

MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFWTVVDMASGRYLWRHLFPSSKKPSD
Homology
[Close]
BLAST of MELO3C017370.2 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          TVVDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]
BLAST of MELO3C017370.2 vs. NCBI nr
Match: KGN63886.1 (hypothetical protein Csa_1G025180 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDD+S E DSSDS+SCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          T+VDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TLVDMASGRYLWRHLFPSSKKPSD 84

[Close]
BLAST of MELO3C017370.2 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 115.5 bits (288), Expect = 8.5e-23
Identity = 63/86 (73.26%), Postives = 65/86 (75.58%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSS--KELDSSDSTSCSKVSSG 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDF A DNSD  S               + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSDAHSXXXXXXXXXXXXXXAMQSG 60

Query: 61 FWTVVDMASGRYLWRHLFPSSKKPSD 85
          FWTVVDMASGRYLWRHLFPSS+K SD
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSQKRSD 86

[Close]
BLAST of MELO3C017370.2 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima])

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 62/86 (72.09%), Postives = 65/86 (75.58%), Query Frame = 0 

Query: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSS--KELDSSDSTSCSKVSSG 60
           MCPLRFILIFLSATLAGFFVLRNLKSQPQDF A +NSD  S               + SG
Sbjct: 68  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADENSDAHSXXXXXXXXXXXXXXAMQSG 127

Query: 61  FWTVVDMASGRYLWRHLFPSSKKPSD 85
           FWTVVDMASGRYLWRHLFPSS+K SD
Sbjct: 128 FWTVVDMASGRYLWRHLFPSSQKRSD 153

[Close]
BLAST of MELO3C017370.2 vs. NCBI nr
Match: XP_022949071.1 (uncharacterized protein LOC111452533 [Cucurbita moschata])

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-21
Identity = 60/86 (69.77%), Postives = 64/86 (74.42%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSD--DSSKELDSSDSTSCSKVSSG 60
          MCPLRFILIFLSATLAGFFVLRN+KSQPQDF A DNSD                  + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNIKSQPQDFEAEDNSDAHXXXXXXXXXXXXXXXAMQSG 60

Query: 61 FWTVVDMASGRYLWRHLFPSSKKPSD 85
          FWTVVDMASGRYLWR+LFPSS+K SD
Sbjct: 61 FWTVVDMASGRYLWRNLFPSSQKRSD 86

[Close]
BLAST of MELO3C017370.2 vs. TAIR10
Match: AT5G58375.1 (Methyltransferase-related protein)

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-15
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKV----S 60
          MCPLR ILIFLSATLAGFFVL+ L S   D +  D+S   ++  D    +  SKV     
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPL--DDSFTDAEHADDDSVSGFSKVGMAMK 60

Query: 61 SGFWTVVDMASGRYLWRHLFPSSKKPS 84
          SGFWT VDMASGRYLW +L  ++K+ S
Sbjct: 61 SGFWTCVDMASGRYLWNNLCSNAKRSS 85

[Close]
BLAST of MELO3C017370.2 vs. TAIR10
Match: AT5G18150.1 (Methyltransferase-related protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-11
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSC-SKVSSGF 60
          MCP+RF+L+F SA LAG+F  + + S P+         DS  EL+     +   K+ +GF
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPE--------FDSPDELNEKQELNLKKKMENGF 60

Query: 61 WTVVDMASGRYLWRHL 76
          W  VDMASGRYLWR+L
Sbjct: 61 WVFVDMASGRYLWRNL 68

[Close]
BLAST of MELO3C017370.2 vs. TAIR10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-11
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60
          MCPLRF+L+F SA LAG+   R + S P+ F + +     +KE    D     K+ +G W
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELF-SDELLQAEAKEKQGLDFK--RKMDNGLW 60

Query: 61 TVVDMASGRYLWRHL 76
          T VDMASGRYLWR+L
Sbjct: 61 TFVDMASGRYLWRNL 72

[Close]
BLAST of MELO3C017370.2 vs. TrEMBL
Match: tr|A0A1S3BWD8|A0A1S3BWD8_CUCME (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.3e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          TVVDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]
BLAST of MELO3C017370.2 vs. TrEMBL
Match: tr|A0A0A0LV42|A0A0A0LV42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDD+S E DSSDS+SCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          T+VDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TLVDMASGRYLWRHLFPSSKKPSD 84

[Close]
BLAST of MELO3C017370.2 vs. TrEMBL
Match: tr|A0A0A0LVB2|A0A0A0LVB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-20
Identity = 59/86 (68.60%), Postives = 68/86 (79.07%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60
          MCPLR ILIFLSATLAGF ++RNLKS  QDF A D++ DS    +SS S + +K+SSGFW
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDS----NSSSSPNSNKISSGFW 60

Query: 61 TVVDMASGRYLWRHLF--PSSKKPSD 85
          TVVDMASGRYLWRHLF   SS+K SD
Sbjct: 61 TVVDMASGRYLWRHLFSSSSSEKASD 82

[Close]
BLAST of MELO3C017370.2 vs. TrEMBL
Match: tr|A0A1S4D7B5|A0A1S4D7B5_TOBAC (uncharacterized protein LOC107826727 OS=Nicotiana tabacum OX=4097 GN=LOC107826727 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.4e-19
Identity = 60/95 (63.16%), Postives = 65/95 (68.42%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQ----PQDFVAGDNSDDSSKELDSSDSTS----- 60
          MCPLR ILIFLSATLAGFFVLRNLKSQ    P D  AG  +DDS  +L S DS S     
Sbjct: 1  MCPLRIILIFLSATLAGFFVLRNLKSQPNVDPDDDDAGAGADDSHGDL-SRDSNSLPLSS 60

Query: 61 --CSKVSSGFWTVVDMASGRYLWRHLFPSSKKPSD 85
            CS +  GFWT VDMASG+YLWRHL  SS  PS+
Sbjct: 61 QVCSAIGKGFWTCVDMASGKYLWRHLVSSSPSPSN 94

[Close]
BLAST of MELO3C017370.2 vs. TrEMBL
Match: tr|W9SAE2|W9SAE2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010690 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18
Identity = 59/94 (62.77%), Postives = 67/94 (71.28%), Query Frame = 0 

Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQ-DFVAGD----NSDDSSKELDSSDSTS---- 60
          MCPLR ILIFLSATLAGFFVLRNLKSQP+  F +GD    N D+S K    + +TS    
Sbjct: 1  MCPLRIILIFLSATLAGFFVLRNLKSQPESQFPSGDETHENLDESEKTKLPNSTTSPFSK 60

Query: 61 -CSKVSSGFWTVVDMASGRYLWRHLFPSSKKPSD 85
           CS + SGFWT VDMASGRYLWRHL  S+ K S+
Sbjct: 61 VCSAMESGFWTCVDMASGRYLWRHLVSSNSKRSE 94

The following BLAST results are available for this feature:
BLAST of MELO3C017370.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453499.11.1e-38100.00PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo][more]
KGN63886.11.8e-3694.05hypothetical protein Csa_1G025180 [Cucumis sativus][more]
XP_023525661.18.5e-2373.26uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo][more]
XP_022997733.12.5e-2272.09uncharacterized protein LOC111492605 [Cucurbita maxima][more]
XP_022949071.13.6e-2169.77uncharacterized protein LOC111452533 [Cucurbita moschata][more]
BLAST of MELO3C017370.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58375.11.6e-1554.02Methyltransferase-related protein[more]
AT5G18150.11.1e-1146.05Methyltransferase-related protein[more]
AT5G14602.15.3e-1148.00FUNCTIONS IN: molecular_function unknown[more]
BLAST of MELO3C017370.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C017370.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BWD8|A0A1S3BWD8_CUCME7.3e-39100.00uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=... [more]
tr|A0A0A0LV42|A0A0A0LV42_CUCSA1.2e-3694.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1[more]
tr|A0A0A0LVB2|A0A0A0LVB2_CUCSA5.8e-2068.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1[more]
tr|A0A1S4D7B5|A0A1S4D7B5_TOBAC8.4e-1963.16uncharacterized protein LOC107826727 OS=Nicotiana tabacum OX=4097 GN=LOC10782672... [more]
tr|W9SAE2|W9SAE2_9ROSA1.1e-1862.77Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010690 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017370.2.1MELO3C017370.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..54
NoneNo IPR availablePANTHERPTHR34132FAMILY NOT NAMEDcoord: 1..81

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C017370.2Csa1G025180Cucumber (Chinese Long) v2cumedB047
MELO3C017370.2CSPI01G04460Wild cucumber (PI 183967)cpimedB050
MELO3C017370.2Cucsa.111670Cucumber (Gy14) v1cgymedB159
MELO3C017370.2Lsi06G012700Bottle gourd (USVL1VR-Ls)lsimedB419
MELO3C017370.2CsGy1G004360Cucumber (Gy14) v2cgybmedB044
MELO3C017370.2Cla018913Watermelon (97103) v1medwmB283
MELO3C017370.2ClCG06G014220Watermelon (Charleston Gray)medwcgB246
MELO3C017370.2Bhi02G000112Wax gourdmedwgoB304
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017370.2Silver-seed gourdcarmedB0606
MELO3C017370.2Silver-seed gourdcarmedB0797
MELO3C017370.2Cucumber (Chinese Long) v3cucmedB051
MELO3C017370.2Watermelon (97103) v2medwmbB247
MELO3C017370.2Cucurbita moschata (Rifu)cmomedB117
MELO3C017370.2Cucurbita maxima (Rimu)cmamedB070
MELO3C017370.2Cucurbita maxima (Rimu)cmamedB128
MELO3C017370.2Cucurbita moschata (Rifu)cmomedB062
MELO3C017370.2Cucurbita pepo (Zucchini)cpemedB388
MELO3C017370.2Cucurbita pepo (Zucchini)cpemedB727