CsGy1G023850 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G023850
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Methyltransferase-related protein
Location	Chr1 : 22545444 .. 22549296 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCGCTGAGATTGATTCTCATATTTCTCTCAGCGACTCTTGCAGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCGATGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAACTCCAACAAGGTCCTTCTTTCTCTCTCTTCTAATACAATTCTTTTTTAATTTCTTCCATTTCAATATCAAATCTTTCTTTCATTAATTGGTGTGTACGTACGTGCTGTATATATATATATATATGTTTGAACAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGGCATTTGTTTTCGTCGTCATCGTCGGAGAAGGCTTCCGATTGATGGATATGATGAATTGTGTTTGGGAGAGGGGTTAGGGGTTAGGGGTTAAGGGTTTTGTTTGGATTAATTGTATCTTCTCCTTGTATATCTTCATTGTTCCGATCCCTTTAATTTCCACCCCTCTTCTTCCCTTCCTATCCAATTACTATATGTATTCAAACTGTTCACAAATGCTTGATCGCTATTGCTTACGATTACAATTGGGATTTTCTTAAGAAACAGATCAAACTGAGGGTTTTGAAGATACAATAGACACGATGAATGAATCAATCAATCCAATTATTGAATTCCTGCAAGTGCCGAGATCAGGCTTCGTAATTAAATTAAATTAAATTAAAGTTAAATTTAATTTGGGTTTAGGGTAGCCCAAAGTTGAGAAAAGTCTTCTGATGTTGCGGTGAAATCGAGACTTGTGGATGCGTTTGCTATTATTATTATTATTTAATTGAAAAACAACTGAAGAAGTGAAGTTTATTTATTATGCCATTCTGACGTGTCCATATGCCCTAAGTCCAATTTTTATAATTTAAATTATTATTTCATTGGGACTACAAAAAAAAAGAAAAAAAAAAATCTCTTGTGTGAATTAGGGCAAAACGGTAAATTCACGAACCCAACTCAATTTTGCTGTAATGAAGTGATTTCAAAATCCAAAAATACCATATTTTTTACCAACGGCCGAATTGTATTTTTGAGTAAAATTTTCATCTTCTACGGAGGCAGAGAGAGAGAGAGAGAGATGCGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCACGGATGAGGAGAAGGAAGACGATGAAGAAGAAGAGAGAGGAAACGAAGTGAATGGCTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGGTTTGAAACTTTCCCACTCCATTTTTAGCTCCTTGCTTCCCTACATCGGACCTTCTATTTGCTTTCTAAATTCCCAATTTTCGAATTTCTTTACCATCTTTGATTCGGTTCTTTTGTAAAGATTGAGTGAGGGAAAACATAAAGAAATGTTGGTGAGTCGATCTGATCTGCTGGGTATTGATTTGTTGACTGTTTATATGAAATTTTAGATTCACAGTGAACCCGAAGCGCAGAATCAGACAACACAATGGTGAGATTAGATGCGGTGCTTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTTTCTGCTCTTCAGGTTACATTTCCTGACTTTCAGCTCTAAACTAGTTTGATTCTGCGTTTTTTCTACTTGATTCTCTTTTACTAGCTGAATGAATGACACTTCGATGATTATGCAAATGTTGAGATGTTAGATTAAAAGAAGAAAAAAAGCAGATTCTCTTTCAGAACTCATTTTTTTTATCATAAGAAATAGTGGCTTGCATATTAGGGATTTTATGGCTTAAAGAATATACCAAAATTTGTTGCTGCTTTAATTTTCTTCTTTAGCCGTTTACTTTCTTGTAAGTTTCCATCAGTTCTAGAATTTGATTTTCTAAACTGTGGGTACAGTTTGAATGGGCGTGGCAGCATCCTAATGAGTCACTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGCGTGGGTATGACATTTGAAAAAATTTATACAATCTTGTCGAATTTGTCTGTTAAATATGCGAGAAGCGTGAAGAGAAACCTAAAAATAATGAAAATATCCATCAACATGTATTGAAAGGTTTGACATTGATATTAAATATTATTGAACATCTCCAATATCTTCTATAAATGCTTGTAAACATCAAATCTTCAAATCGATGTGGACATGAGTATTTTAATCCTTGGATAATCCTCCATATCAGCAAGAAAAGGGAAAGATTTATAGTATCTCAATAAAGACAACAATCTTATAACTGTCTTGTTTTTGGGGCAAAACCAAAGTTTGAGAGTGAAAAGGGCGATATCTTATTACTGTGATTTATGAAGGAGCAACAAACTGATGTAATTTCAATCAATTTTGTCTGGCAATCTCTTTATTCACTTATTTCTCCTTATCCTTGCAGTTTAAATATAACTGTAAACTACTTCTCTACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCAATGAGCTTCCATGCTATTCCGAAGGAGATCAAGATATGCTTGAAAATGAAGGTGACTGGGAGTATAATCGAGAACGTGAAGAAATTTGTGGTTTTCGAGTGTATGGATCAATGAAAGAAGTTTCAAATGAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCACGTGTTGCGTGGATGTGATAAGGAGCTTGAGACCAATGAACAAGTGCCACCTTCTTCATGTACTCCGTCTTATATTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTTCGTGTGGTCAGTCTTGCATTGTAGCAGGTACATCTAGAACTGAAATTGTCATTGATGACGAAGAGGAAAACCAATTAGAAGGGAGTAGTATGAACTTGCAGGAGCAACCAGGTAGGGAGAATTTAACATCAGGAATAGCTTCTGAAATCAGTAAAGTTTCAAGGTGGAACAATGGCTGGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCCGTCTCCAGACTGCCGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATTCAATTGTAGAAGGATGGATGGATTTGGATTATTGTGCATATAGGAGATATGGAATGAGTTTTCATGAGAAGTTTCATTTTTGCAATGAAGAGGTAGTATTACTATAACAGATAGCATCTTCTCAACCCTTTTCAGAGATAACGTGGGCTCAACTATGGTTGACTAGACCAAATAAGAGGGGAACATGTTGTCAAGTTATATATAATAATTATAATAACAGCCTCTCTTGCAAAGGCATCATTTTAAAGGGGAATCTAAGTCTGAAAAATAACATTGAATCGGTTGTGGTATCAATTAATTTGTTTCAAACGACCGGGATCAATGTTGAACTATGCAACTACACCTTGGTTACATATCCATCTATACTACTATATATGGATGGAGTGTAGATGAGAGAATTTTTTTTACTTTTTTCTCTTTGCTCGATTCACATTCCTTCCTTGTATGTACCTTTCCTGTTTTGACAAGGAATGACAATGGAAGAGAGATTATGAGTTTATAGAGGCATATGAACAGAAATTCAAGCAAGGAGAAAATGAAGGTGAATCATCTAAATGATAATTGTATCGTTCTTAAAATTAAGAAAGAAAAAAAAAAA

mRNA sequence

ATGTGTCCGCTGAGATTGATTCTCATATTTCTCTCAGCGACTCTTGCAGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCGATGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAACTCCAACAAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGGCATTTGTTTTCGTCGTCATCGTCGGAGAAGGCTTCCGATTGATGGATATGATGAATTGTGTTTGGGAGAGGGGTTAGGGGTTAGGGGTTAAGGGTTTTGTTTGGATTAATTGTATCTTCTCCTTGTATATCTTCATTGTTCCGATCCCTTTAATTTCCACCCCTCTTCTTCCCTTCCTATCCAATTACTATATGTATTCAAACTGTTCACAAATGCTTGATCGCTATTGCTTACGATTACAATTGGGATTTTCTTAAGAAACAGATCAAACTGAGGGTTTTGAAGATACAATAGACACGATGAATGAATCAATCAATCCAATTATTGAATTCCTGCAAGTGCCGAGATCAGGCTTCGTAATTAAATTAAATTAAATTAAAGTTAAATTTAATTTGGGTTTAGGGTAGCCCAAAGTTGAGAAAAGTCTTCTGATGTTGCGGTGAAATCGAGACTTGTGGATGCGTTTGCTATTATTATTATTATTTAATTGAAAAACAACTGAAGAAGTGAAGTTTATTTATTATGCCATTCTGACGTGTCCATATGCCCTAAGTCCAATTTTTATAATTTAAATTATTATTTCATTGGGACTACAAAAAAAAAGAAAAAAAAAAATCTCTTGTGTGAATTAGGGCAAAACGGTAAATTCACGAACCCAACTCAATTTTGCTGTAATGAAGTGATTTCAAAATCCAAAAATACCATATTTTTTACCAACGGCCGAATTGTATTTTTGAGTAAAATTTTCATCTTCTACGGAGGCAGAGAGAGAGAGAGAGAGATGCGGAAGAGGAAAGAGAAACCGGAAATCTGTAAAACCACGGATGAGGAGAAGGAAGACGATGAAGAAGAAGAGAGAGGAAACGAAGTGAATGGCTTCTTTTCATGCTATCTCTTGGCCTCTGCTTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAGCGCAGAATCAGACAACACAATGGTGAGATTAGATGCGGTGCTTGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTGTGCATTTATGGCTTCCCTACTAATGTTTCTGCTCTTCAGTTTGAATGGGCGTGGCAGCATCCTAATGAGTCACTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCTAACAAAGTTAAACTTGCATACACAATGCTCACACTTCCTGCTTGGCGTGGTTTAAATATAACTGTAAACTACTTCTCTACAAAGTTCATGAAGAATGCGGCTGGTTGCCCAAGTTTGCCAGAGCATATGAAGGTCCAAGTTTCCCCCATCAATGAGCTTCCATGCTATTCCGAAGGAGATCAAGATATGCTTGAAAATGAAGGTGACTGGGAGTATAATCGAGAACGTGAAGAAATTTGTGGTTTTCGAGTGTATGGATCAATGAAAGAAGTTTCAAATGAAGTTCCTCAAAAGTTAATGGATTATCAGACAGGTACAGATGGAAGACCTCCTCACGTGTTGCGTGGATGTGATAAGGAGCTTGAGACCAATGAACAAGTGCCACCTTCTTCATGTACTCCGTCTTATATTGATGTGGGTATGTCTTATGACTTGTGTGCATGTGATGAAGGACTCGAGAATGATGAAAGAGAGGCAGCTTCGTGTGGTCAGTCTTGCATTGTAGCAGGTACATCTAGAACTGAAATTGTCATTGATGACGAAGAGGAAAACCAATTAGAAGGGAGTAGTATGAACTTGCAGGAGCAACCAGGTAGGGAGAATTTAACATCAGGAATAGCTTCTGAAATCAGTAAAGTTTCAAGGTGGAACAATGGCTGGGTTCCAACTGTTGAGTATGAGGTTATCGATGTGTCTACCCCGTCTCCAGACTGCCGAACAAGTTCGCATAGATTCAAGAGAAGAGTTACTTCCGGTAAGTCTGAGATGATTGACTTGACTAAATCTCCTACATTTATTCAATTGTAGAAGGATGGATGGATTTGGATTATTGTGCATATAGGAGATATGGAATGAGTTTTCATGAGAAGTTTCATTTTTGCAATGAAGAGGTAGTATTACTATAACAGATAGCATCTTCTCAACCCTTTTCAGAGATAACGTGGGCTCAACTATGGTTGACTAGACCAAATAAGAGGGGAACATGTTGTCAAGTTATATATAATAATTATAATAACAGCCTCTCTTGCAAAGGCATCATTTTAAAGGGGAATCTAAGTCTGAAAAATAACATTGAATCGGTTGTGGTATCAATTAATTTGTTTCAAACGACCGGGATCAATGTTGAACTATGCAACTACACCTTGGTTACATATCCATCTATACTACTATATATGGATGGAGTGTAGATGAGAGAATTTTTTTTACTTTTTTCTCTTTGCTCGATTCACATTCCTTCCTTGTATGTACCTTTCCTGTTTTGACAAGGAATGACAATGGAAGAGAGATTATGAGTTTATAGAGGCATATGAACAGAAATTCAAGCAAGGAGAAAATGAAGGTGAATCATCTAAATGATAATTGTATCGTTCTTAAAATTAAGAAAGAAAAAAAAAAA

Coding sequence (CDS)

ATGTGTCCGCTGAGATTGATTCTCATATTTCTCTCAGCGACTCTTGCAGGCTTCTTCCTTATCCGTAACCTCAAATCTCCCTCTCAAGATTTCCACGCCGATGACCATACTTCCGATTCCAATTCCTCTTCATCCCCCAACTCCAACAAGATCTCATCGGGGTTCTGGACGGTGGTAGATATGGCTTCCGGTCGCTACTTATGGAGGCATTTGTTTTCGTCGTCATCGTCGGAGAAGGCTTCCGATTGA

Protein sequence

MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHTSDSNSSSSPNSNKISSGFWTVVDMASGRYLWRHLFSSSSSEKASD

Homology

[Close]

BLAST of CsGy1G023850 vs. NCBI nr
Match: KGN65855.1 (hypothetical protein Csa_1G533620 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29
Identity = 70/82 (85.37%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHTXXXXXXXXXXXNKISSGFWTVVD 60
          MCPLRLILIFLSATLAGF LIRNLKSPSQDFHADDHT           NKISSGFWTVVD
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSSSEKASD 83
          MASGRYLWRHLFSSSSSEKASD
Sbjct: 61 MASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of CsGy1G023850 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 9.5e-19
Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDF----HADDHTXXXXXXXXXXXNKISSGFW 60
          MCPLR ILIFLSATLAGFF++RNLKS  QDF    ++DD +           +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSSEKASD 83
          TVVDMASGRYLWRHLF   SS+K SD
Sbjct: 61 TVVDMASGRYLWRHLF--PSSKKPSD 84

[Close]

BLAST of CsGy1G023850 vs. NCBI nr
Match: KGN63886.1 (hypothetical protein Csa_1G025180 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDF----HADDHTXXXXXXXXXXXNKISSGFW 60
          MCPLR ILIFLSATLAGFF++RNLKS  QDF    ++DD++           +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSSEKASD 83
          T+VDMASGRYLWRHLF   SS+K SD
Sbjct: 61 TLVDMASGRYLWRHLF--PSSKKPSD 84

[Close]

BLAST of CsGy1G023850 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 65/88 (73.86%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHT------XXXXXXXXXXXNKISSG 60
          MCPLR ILIFLSATLAGFF++RNLKS  QDF ADD++      XXXXXXXXXXX  + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSDAHSXXXXXXXXXXXXXXAMQSG 60

Query: 61 FWTVVDMASGRYLWRHLFSSSSSEKASD 83
          FWTVVDMASGRYLWRHLF   SS+K SD
Sbjct: 61 FWTVVDMASGRYLWRHLF--PSSQKRSD 86

[Close]

BLAST of CsGy1G023850 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima])

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-17
Identity = 64/88 (72.73%), Postives = 71/88 (80.68%), Query Frame = 0


Query: 1   MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHT------XXXXXXXXXXXNKISSG 60
           MCPLR ILIFLSATLAGFF++RNLKS  QDF AD+++      XXXXXXXXXXX  + SG
Sbjct: 68  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADENSDAHSXXXXXXXXXXXXXXAMQSG 127

Query: 61  FWTVVDMASGRYLWRHLFSSSSSEKASD 83
           FWTVVDMASGRYLWRHLF   SS+K SD
Sbjct: 128 FWTVVDMASGRYLWRHLF--PSSQKRSD 153

[Close]

BLAST of CsGy1G023850 vs. TAIR10
Match: AT5G58375.1 (Methyltransferase-related protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-14
Identity = 44/84 (52.38%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQD---------FHADDHTXXXXXXXXXXXNKI 60
          MCPLRLILIFLSATLAGFF+++ L S S D          HADD +             +
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVSGFSKVGM---AM 60

Query: 61 SSGFWTVVDMASGRYLWRHLFSSS 76
           SGFWT VDMASGRYLW +L S++
Sbjct: 61 KSGFWTCVDMASGRYLWNNLCSNA 81

[Close]

BLAST of CsGy1G023850 vs. TAIR10
Match: AT5G18150.1 (Methyltransferase-related protein)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-10
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHTXXXXXXXXXXXNKISSGFWTVVD 60
          MCP+R +L+F SA LAG+F  + + S S +F + D              K+ +GFW  VD
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSS-SPEFDSPDE--LNEKQELNLKKKMENGFWVFVD 60

Query: 61 MASGRYLWRHL 72
          MASGRYLWR+L
Sbjct: 61 MASGRYLWRNL 68

[Close]

BLAST of CsGy1G023850 vs. TAIR10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 59.7 bits (143), Expect = 9.8e-10
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADD--HTXXXXXXXXXXXNKISSGFWTV 60
          MCPLR +L+F SA LAG+   R + S  + F +D+                K+ +G WT 
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELF-SDELLQAEAKEKQGLDFKRKMDNGLWTF 60

Query: 61 VDMASGRYLWRHL 72
          VDMASGRYLWR+L
Sbjct: 61 VDMASGRYLWRNL 72

[Close]

BLAST of CsGy1G023850 vs. TrEMBL
Match: tr|A0A0A0LVB2|A0A0A0LVB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-29
Identity = 70/82 (85.37%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHTXXXXXXXXXXXNKISSGFWTVVD 60
          MCPLRLILIFLSATLAGF LIRNLKSPSQDFHADDHT           NKISSGFWTVVD
Sbjct: 1  MCPLRLILIFLSATLAGFVLIRNLKSPSQDFHADDHTFDSNSSSSPNSNKISSGFWTVVD 60

Query: 61 MASGRYLWRHLFSSSSSEKASD 83
          MASGRYLWRHLFSSSSSEKASD
Sbjct: 61 MASGRYLWRHLFSSSSSEKASD 82

[Close]

BLAST of CsGy1G023850 vs. TrEMBL
Match: tr|A0A1S3BWD8|A0A1S3BWD8_CUCME (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.3e-19
Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDF----HADDHTXXXXXXXXXXXNKISSGFW 60
          MCPLR ILIFLSATLAGFF++RNLKS  QDF    ++DD +           +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSSEKASD 83
          TVVDMASGRYLWRHLF   SS+K SD
Sbjct: 61 TVVDMASGRYLWRHLF--PSSKKPSD 84

[Close]

BLAST of CsGy1G023850 vs. TrEMBL
Match: tr|A0A0A0LV42|A0A0A0LV42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.2e-19
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDF----HADDHTXXXXXXXXXXXNKISSGFW 60
          MCPLR ILIFLSATLAGFF++RNLKS  QDF    ++DD++           +K+SSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSSSEKASD 83
          T+VDMASGRYLWRHLF   SS+K SD
Sbjct: 61 TLVDMASGRYLWRHLF--PSSKKPSD 84

[Close]

BLAST of CsGy1G023850 vs. TrEMBL
Match: tr|A0A2C9U344|A0A2C9U344_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G137400 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.5e-16
Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKS---PSQDFHADDHTXXXXXXXXXXXNKISSGFWT 60
          MCPLRLILIFLSATLAGFF++RN KS    + D  +D+ +           + I SGFWT
Sbjct: 1  MCPLRLILIFLSATLAGFFVVRNFKSRPFTADDNDSDESSSTERPFPSKVRSAIESGFWT 60

Query: 61 VVDMASGRYLWRHLFSSSSSEKAS 82
           VDMASGRYLWRHL SS SS  +S
Sbjct: 61 CVDMASGRYLWRHLVSSPSSSSSS 84

[Close]

BLAST of CsGy1G023850 vs. TrEMBL
Match: tr|A0A2P5XX48|A0A2P5XX48_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12714 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-15
Identity = 50/80 (62.50%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 1  MCPLRLILIFLSATLAGFFLIRNLKSPSQDFHADDHTXXXXXXXXXXXNK----ISSGFW 60
          MCPLRLILIFLSATLAGFFL+RN+KS  Q  + DDHT           +K    I SGFW
Sbjct: 1  MCPLRLILIFLSATLAGFFLLRNIKSHPQT-NDDDHTRPNNNNSHSAFSKVWAAIESGFW 60

Query: 61 TVVDMASGRYLWRHLFSSSS 77
            +DMASGRYLWRHL SS+S
Sbjct: 61 ASLDMASGRYLWRHLVSSNS 79

The following BLAST results are available for this feature:

BLAST of CsGy1G023850 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65855.1	1.6e-29	85.37	hypothetical protein Csa_1G533620 [Cucumis sativus]	[more]
XP_008453499.1	9.5e-19	63.95	PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]	[more]
KGN63886.1	1.2e-18	62.79	hypothetical protein Csa_1G025180 [Cucumis sativus]	[more]
XP_023525661.1	1.8e-17	73.86	uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]	[more]
XP_022997733.1	5.2e-17	72.73	uncharacterized protein LOC111492605 [Cucurbita maxima]	[more]

BLAST of CsGy1G023850 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58375.1	1.0e-14	52.38	Methyltransferase-related protein	[more]
AT5G18150.1	1.5e-10	45.07	Methyltransferase-related protein	[more]
AT5G14602.1	9.8e-10	43.84	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CsGy1G023850 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G023850 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVB2\|A0A0A0LVB2_CUCSA	1.0e-29	85.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533620 PE=4 SV=1	[more]
tr\|A0A1S3BWD8\|A0A1S3BWD8_CUCME	6.3e-19	63.95	uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=...	[more]
tr\|A0A0A0LV42\|A0A0A0LV42_CUCSA	8.2e-19	62.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1	[more]
tr\|A0A2C9U344\|A0A2C9U344_MANES	8.5e-16	58.33	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G137400 PE=4 SV=...	[more]
tr\|A0A2P5XX48\|A0A2P5XX48_GOSBA	1.9e-15	62.50	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12714 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023850.1	CsGy1G023850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	PANTHER	PTHR34132	FAMILY NOT NAMED	coord: 1..79

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G023850	Cla008117	Watermelon (97103) v1	cgybwmB023
CsGy1G023850	Csa1G533620	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G023850	MELO3C020504	Melon (DHL92) v3.5.1	cgybmeB023
CsGy1G023850	ClCG03G000250	Watermelon (Charleston Gray)	cgybwcgB044
CsGy1G023850	CSPI01G24360	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G023850	CmaCh13G000170	Cucurbita maxima (Rimu)	cgybcmaB070
CsGy1G023850	CmaCh01G007230	Cucurbita maxima (Rimu)	cgybcmaB113
CsGy1G023850	Lsi02G012290	Bottle gourd (USVL1VR-Ls)	cgyblsiB027
CsGy1G023850	Cp4.1LG02g11350	Cucurbita pepo (Zucchini)	cgybcpeB095
CsGy1G023850	CsaV3_1G036660	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G023850	Cla97C03G051060	Watermelon (97103) v2	cgybwmbB042
CsGy1G023850	Bhi08G000366	Wax gourd	cgybwgoB045
CsGy1G023850	Carg07020	Silver-seed gourd	carcgybB0524

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G023850	Silver-seed gourd	carcgybB0525
CsGy1G023850	Cucurbita maxima (Rimu)	cgybcmaB075
CsGy1G023850	Cucurbita maxima (Rimu)	cgybcmaB104
CsGy1G023850	Cucurbita moschata (Rifu)	cgybcmoB069
CsGy1G023850	Cucurbita moschata (Rifu)	cgybcmoB098
CsGy1G023850	Cucurbita pepo (Zucchini)	cgybcpeB071
CsGy1G023850	Melon (DHL92) v3.6.1	cgybmedB021