Carg10203 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGCGCCGGCGTCCACGGCGGAGGACCCTGCGGCGCGTGCAAGTTGTTGAGGAGAAAGTGTGTGAAAGGATGCATATTTGCACCCTATTTCGACTCGGAAGAAGGCGCCGCCCACTTCGCGGCGGTGCACAAGGTGTTTGGAGCTAGCAATGCCTCCAAACTCCTCCTCCGCATCCCGGCAAACAAGCGGGTGGAGGCGTGTGTTAGCCTTTGTTATGAAGCTCTGGCTAGGGTTCGGGATCCGGTGTATGGCTGTGTTGCCCATATCTTCTCCCTTCAGCAACAGGTCAGTTCTTCAAATCTTAGGGTATTCTTTAAACATCCATCTATTATGCATACTCCGATTTTAGGGTATTCTTTTTAGTGGGTGTGTAAGATTCAAGTGCCTGAATGCAAAAACAGGAAACTTATTTATTTTATTTATTTTTTTATTGGGAATTAATTTGCTTCAAAACCCATGGGGACTTGAATTTGTAGGAAGCAAATTATTAGGGTTTTCATTTTTTGGGGTGAAATTTAAGTGTCCCATTTTCCAATGAATTTTTGTCAAACTAATTGAAATAAATTTCTTGTTTTGAGAGAGAGAAAAAAGAGAGCGGTGGCGGCTGGCTTATATATTTGGTGTTGCTTGCCGAAGTTACTAAGCAAACAATTTTAGCTGCTCGAGAAATAAATAAATAACTTTCCACATTTGACTTTTTTCATATTTATCCCTTTATTTATGACCCTTCTATTTTAAAATATTAACTTTTTTTTTTTTTTAATTCAATTTCATTTGTATTTTTCCAACAAAAAAAAAAAAACTTCTTATTAATTAATTTAGTTTCTTGATATTTTTAAAGAATAATGTTTGAAATATAAAATTCAAAATTTAAATTACTTTTCTCTAGAATTTAATTGGATAGAATTAAAAGTTTAAAGACATATTAGACACAAAAATTAATAATTTAAGAGTCCATTAGGAACCTATGGGATATTTTTAAAAATTTAGGGACGAAATAGACATAAATTTGAAATAATATAGGGTTTGTTTTTTATGTTTTTGAATTTTTGCAAATAAAAAAAAAAGTTTATTAATTGAAAGAGTTTGTTTGATTAATTTTTGCTTTATATTTGCCAAGAATATCAAAGTTTAATTGTCATTATATGGTCTATTATTGTCCATCAACCAATCTCCGTCACACTTATATCTACCTATGTATATAGATATGTTTATACGTACATATGTGTATATGTAATTGTCTTACGTAGGACGCCATGTTAGTTTGCATTTTGAGATAAGTTAGAAAAGAATCGTTCGTTAAAGTTTCAAATTTATGGCTTTCTCCCTCTCGTTCTTACTTGGAAACTTTATTTATTTGTCGTTATTATTATTATTACTTTGAATTCAATACGTATACATTGAGAGATTCGGAAATTTCTTGATCAAGAACGTAGACCTAAACAGTTGAATTGTGTTGAAATTAGGTCATGAATACATAGAACATCTCGGTATTGGTATTTCGACTTCGATAATGTCGTGTACAAACCTAACCCTAATTCATATGAGTGTTCATCACAGGTAGTGAGCCTGCAGGCAGAGCTAGCATACATTCAAGCCAAACTTTCCACATTGCAGCGGCTACTACCGCCACCGCTACACAGCCCGTCCTCGACTGCTCGCCACAATCCTCTCCCAGAAACCACCCCGGGTTCCGATATGGGTCTGCTGCCTAATGTTCGAATGATCCTCGACCCGCTCCAAACGCAGCTAGGTTGTAATGAAACGACGAGTAGCTTTCTGAACCCAATTGATCATGAAGATGAGATGGAGGAAGATGGTGAGCTTCAATCTCTGGCTCGAGAGTTCGTTTCGAGGTATTTGCCCGGAGTAGGATTCCGGCCGCCGTGCTCTCAGATTTGA ATGAGTAGCGCCGGCGTCCACGGCGGAGGACCCTGCGGCGCGTGCAAGTTGTTGAGGAGAAAGTGTGTGAAAGGATGCATATTTGCACCCTATTTCGACTCGGAAGAAGGCGCCGCCCACTTCGCGGCGGTGCACAAGGTGTTTGGAGCTAGCAATGCCTCCAAACTCCTCCTCCGCATCCCGGCAAACAAGCGGGTGGAGGCGTGTGTTAGCCTTTGTTATGAAGCTCTGGCTAGGGTTCGGGATCCGGTGTATGGCTGTGTTGCCCATATCTTCTCCCTTCAGCAACAGGTAGTGAGCCTGCAGGCAGAGCTAGCATACATTCAAGCCAAACTTTCCACATTGCAGCGGCTACTACCGCCACCGCTACACAGCCCGTCCTCGACTGCTCGCCACAATCCTCTCCCAGAAACCACCCCGGGTTCCGATATGGGTCTGCTGCCTAATGTTCGAATGATCCTCGACCCGCTCCAAACGCAGCTAGGTTGTAATGAAACGACGAGTAGCTTTCTGAACCCAATTGATCATGAAGATGAGATGGAGGAAGATGGTGAGCTTCAATCTCTGGCTCGAGAGTTCGTTTCGAGGTATTTGCCCGGAGTAGGATTCCGGCCGCCGTGCTCTCAGATTTGA ATGAGTAGCGCCGGCGTCCACGGCGGAGGACCCTGCGGCGCGTGCAAGTTGTTGAGGAGAAAGTGTGTGAAAGGATGCATATTTGCACCCTATTTCGACTCGGAAGAAGGCGCCGCCCACTTCGCGGCGGTGCACAAGGTGTTTGGAGCTAGCAATGCCTCCAAACTCCTCCTCCGCATCCCGGCAAACAAGCGGGTGGAGGCGTGTGTTAGCCTTTGTTATGAAGCTCTGGCTAGGGTTCGGGATCCGGTGTATGGCTGTGTTGCCCATATCTTCTCCCTTCAGCAACAGGTAGTGAGCCTGCAGGCAGAGCTAGCATACATTCAAGCCAAACTTTCCACATTGCAGCGGCTACTACCGCCACCGCTACACAGCCCGTCCTCGACTGCTCGCCACAATCCTCTCCCAGAAACCACCCCGGGTTCCGATATGGGTCTGCTGCCTAATGTTCGAATGATCCTCGACCCGCTCCAAACGCAGCTAGGTTGTAATGAAACGACGAGTAGCTTTCTGAACCCAATTGATCATGAAGATGAGATGGAGGAAGATGGTGAGCTTCAATCTCTGGCTCGAGAGTTCGTTTCGAGGTATTTGCCCGGAGTAGGATTCCGGCCGCCGTGCTCTCAGATTTGA MSSAGVHGGGPCGACKLLRRKCVKGCIFAPYFDSEEGAAHFAAVHKVFGASNASKLLLRIPANKRVEACVSLCYEALARVRDPVYGCVAHIFSLQQQVVSLQAELAYIQAKLSTLQRLLPPPLHSPSSTARHNPLPETTPGSDMGLLPNVRMILDPLQTQLGCNETTSSFLNPIDHEDEMEEDGELQSLAREFVSRYLPGVGFRPPCSQI
BLAST of Carg10203 vs. NCBI nr
Match: XP_023006103.1 (LOB domain-containing protein 19-like [Cucurbita maxima]) HSP 1 Score: 366.3 bits (939), Expect = 6.9e-98 Identity = 199/210 (94.76%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of Carg10203 vs. NCBI nr
Match: XP_022959313.1 (LOB domain-containing protein 19-like [Cucurbita moschata]) HSP 1 Score: 364.0 bits (933), Expect = 3.4e-97 Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of Carg10203 vs. NCBI nr
Match: XP_023548961.1 (LOB domain-containing protein 19-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 361.3 bits (926), Expect = 2.2e-96 Identity = 199/210 (94.76%), Postives = 205/210 (97.62%), Query Frame = 0
BLAST of Carg10203 vs. NCBI nr
Match: KGN46237.1 (hypothetical protein Csa_6G076850 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76 Identity = 164/204 (80.39%), Postives = 179/204 (87.75%), Query Frame = 0
BLAST of Carg10203 vs. NCBI nr
Match: XP_004145059.2 (PREDICTED: LOB domain-containing protein 19 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76 Identity = 164/204 (80.39%), Postives = 179/204 (87.75%), Query Frame = 0
BLAST of Carg10203 vs. TAIR10
Match: AT2G45410.1 (LOB domain-containing protein 19) HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39 Identity = 94/214 (43.93%), Postives = 122/214 (57.01%), Query Frame = 0
BLAST of Carg10203 vs. TAIR10
Match: AT4G00210.1 (LOB domain-containing protein 31) HSP 1 Score: 151.4 bits (381), Expect = 6.3e-37 Identity = 91/216 (42.13%), Postives = 112/216 (51.85%), Query Frame = 0
BLAST of Carg10203 vs. TAIR10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36 Identity = 106/188 (56.38%), Postives = 127/188 (67.55%), Query Frame = 0
BLAST of Carg10203 vs. TAIR10
Match: AT2G45420.1 (LOB domain-containing protein 18) HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35 Identity = 65/84 (77.38%), Postives = 76/84 (90.48%), Query Frame = 0
BLAST of Carg10203 vs. TAIR10
Match: AT3G58190.1 (lateral organ boundaries-domain 29) HSP 1 Score: 141.7 bits (356), Expect = 5.0e-34 Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Carg10203 vs. Swiss-Prot
Match: sp|O22132|LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.5e-38 Identity = 94/214 (43.93%), Postives = 122/214 (57.01%), Query Frame = 0
BLAST of Carg10203 vs. Swiss-Prot
Match: sp|O81322|LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=LBD31 PE=2 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35 Identity = 91/216 (42.13%), Postives = 112/216 (51.85%), Query Frame = 0
BLAST of Carg10203 vs. Swiss-Prot
Match: sp|O81323|LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.9e-35 Identity = 106/188 (56.38%), Postives = 127/188 (67.55%), Query Frame = 0
BLAST of Carg10203 vs. Swiss-Prot
Match: sp|O22131|LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2) HSP 1 Score: 146.0 bits (367), Expect = 4.8e-34 Identity = 65/84 (77.38%), Postives = 76/84 (90.48%), Query Frame = 0
BLAST of Carg10203 vs. Swiss-Prot
Match: sp|Q9M2J7|LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.0e-33 Identity = 62/95 (65.26%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Carg10203 vs. TrEMBL
Match: tr|A0A0A0KCW1|A0A0A0KCW1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076850 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 9.9e-77 Identity = 164/204 (80.39%), Postives = 179/204 (87.75%), Query Frame = 0
BLAST of Carg10203 vs. TrEMBL
Match: tr|A0A1S3CBD6|A0A1S3CBD6_CUCME (LOB domain-containing protein 19 OS=Cucumis melo OX=3656 GN=LOC103499031 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 4.2e-75 Identity = 164/204 (80.39%), Postives = 178/204 (87.25%), Query Frame = 0
BLAST of Carg10203 vs. TrEMBL
Match: tr|A0A1R3I7V5|A0A1R3I7V5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14278 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 7.4e-56 Identity = 129/206 (62.62%), Postives = 141/206 (68.45%), Query Frame = 0
BLAST of Carg10203 vs. TrEMBL
Match: tr|A0A1R3K0K6|A0A1R3K0K6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_12555 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55 Identity = 127/206 (61.65%), Postives = 141/206 (68.45%), Query Frame = 0
BLAST of Carg10203 vs. TrEMBL
Match: tr|A0A061DTV8|A0A061DTV8_THECC (LOB domain-containing protein 31 OS=Theobroma cacao OX=3641 GN=TCM_005497 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.5e-52 Identity = 120/205 (58.54%), Postives = 135/205 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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