ClCG05G002190 (gene) Watermelon (Charleston Gray)

NameClCG05G002190
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionLOB domain protein 18
LocationCG_Chr05 : 2110702 .. 2111742 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTTTGCTTAGCTTTTCCTGAAAGAACGCAAGCAAGCAAGGCTGAGATGAGCTCGAGGCGCAGCCGCGGAAGTTGCCCAGAAGGCAAAGGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTATGCCAGAGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGTACAACTCATTTTGCAGCTGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGATGCTTCTACATATTCCTGAACACAAACGGCTCGACGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTTTTGGCTGTGTTGCTCATATCTTTGCCCTCCAACAACAGGTAAAAACAAATAACTCCATCTAACAATTTCTGATTTTTGGTTACTGAAAGGTCAAGCTTATAAAAATTCTAAATGTTTCCTTAGAAAAGATGAAAACCCACACAATCTTTAAAAACTAAATGATCATCAAATGGAGCCCTCAATTACTTCTATAATATCCATTTGAGACTTGTGATCATCATCATACATCATCATACATCTTCATATGCGAAACAGACTTGTATACATTATTTAGTTTTCAATTTTAGTTTCACATATAATTTGTATATCAATATATAAATGCCAAAATTTGAGTGATATACATTAATTTTTAGGCTGCAAGGTTGCAAGTAGAGATCTCGTATTTGCAAGCGCACCTAGCAACATCTGAGCTTCCAAGACCCGCACCCAATCTACAGGCACAGCCACCAGCTCTAGTCAAGAAGCCAACTCTATCCTCAATTGTAAACCTTCCATCAGATTGCCCTTCTTTTCCTGCTGAATCAGATCTTTCTCGACTTCTCGATCCCATCGAGCAAGCTTCACGGCCGAAGTTGCAATCTCCCTTGGAATTGTCCCAAATTGGAAGCAACAGTTTCCCATCCATGAGCAGCATTGATCAACAAATCGTCCAAAAACAACTGGCCTCAATGCGACACATTGGTGCCTCGCTATTTCCGTGCGTCCCTAAAGGAGCCTAA

mRNA sequence

AAGCTTTGCTTAGCTTTTCCTGAAAGAACGCAAGCAAGCAAGGCTGAGATGAGCTCGAGGCGCAGCCGCGGAAGTTGCCCAGAAGGCAAAGGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTATGCCAGAGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGTACAACTCATTTTGCAGCTGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGATGCTTCTACATATTCCTGAACACAAACGGCTCGACGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTTTTGGCTGTGTTGCTCATATCTTTGCCCTCCAACAACAGGCTGCAAGGTTGCAAGTAGAGATCTCGTATTTGCAAGCGCACCTAGCAACATCTGAGCTTCCAAGACCCGCACCCAATCTACAGGCACAGCCACCAGCTCTAGTCAAGAAGCCAACTCTATCCTCAATTGTAAACCTTCCATCAGATTGCCCTTCTTTTCCTGCTGAATCAGATCTTTCTCGACTTCTCGATCCCATCGAGCAAGCTTCACGGCCGAAGTTGCAATCTCCCTTGGAATTGTCCCAAATTGGAAGCAACAGTTTCCCATCCATGAGCAGCATTGATCAACAAATCGTCCAAAAACAACTGGCCTCAATGCGACACATTGGTGCCTCGCTATTTCCGTGCGTCCCTAAAGGAGCCTAA

Coding sequence (CDS)

AAGCTTTGCTTAGCTTTTCCTGAAAGAACGCAAGCAAGCAAGGCTGAGATGAGCTCGAGGCGCAGCCGCGGAAGTTGCCCAGAAGGCAAAGGTGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAGTGTATGCCAGAGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGTACAACTCATTTTGCAGCTGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGATGCTTCTACATATTCCTGAACACAAACGGCTCGACGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTTTTGGCTGTGTTGCTCATATCTTTGCCCTCCAACAACAGGCTGCAAGGTTGCAAGTAGAGATCTCGTATTTGCAAGCGCACCTAGCAACATCTGAGCTTCCAAGACCCGCACCCAATCTACAGGCACAGCCACCAGCTCTAGTCAAGAAGCCAACTCTATCCTCAATTGTAAACCTTCCATCAGATTGCCCTTCTTTTCCTGCTGAATCAGATCTTTCTCGACTTCTCGATCCCATCGAGCAAGCTTCACGGCCGAAGTTGCAATCTCCCTTGGAATTGTCCCAAATTGGAAGCAACAGTTTCCCATCCATGAGCAGCATTGATCAACAAATCGTCCAAAAACAACTGGCCTCAATGCGACACATTGGTGCCTCGCTATTTCCGTGCGTCCCTAAAGGAGCCTAA

Protein sequence

KLCLAFPERTQASKAEMSSRRSRGSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQSPLELSQIGSNSFPSMSSIDQQIVQKQLASMRHIGASLFPCVPKGA
BLAST of ClCG05G002190 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 218.4 bits (555), Expect = 8.6e-56
Identity = 107/171 (62.57%), Postives = 124/171 (72.51%), Query Frame = 1

Query: 24  GSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHI 83
           G    G GGGPCGACKFLRRKC+P CIFAPYFDSEQG+ +FAAVHKVFGASNVSK+LLHI
Sbjct: 27  GGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHI 86

Query: 84  PEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELP-- 143
           P H+R DA +TICYEAQAR+R+P++GCVAHIFALQQQ   LQ E+SYLQAHLA+ ELP  
Sbjct: 87  PVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELPQP 146

Query: 144 --RPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQAS 191
             RP P  Q QP      P L +I +LP+     P+  DL+ + D    +S
Sbjct: 147 QTRPQPMPQPQPLFFTPPPPL-AITDLPASVSPLPSTYDLASIFDQTTSSS 196

BLAST of ClCG05G002190 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 7.5e-52
Identity = 104/177 (58.76%), Postives = 125/177 (70.62%), Query Frame = 1

Query: 25  SCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIP 84
           S   G GGGPCGACKFLRRKC+  CIFAPYFDSEQG  HFAAVHKVFGASNVSK+L H+P
Sbjct: 8   SSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVP 67

Query: 85  EHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRPA 144
           EHKR DA ++IC+EAQAR+R+P++GCV+HI +LQQQ   LQ E+SYLQAHLAT ELP+P 
Sbjct: 68  EHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELPQP- 127

Query: 145 PNLQAQPPALVKKPTLS----SIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQSP 198
                QPP +    + S    SI +LP+  PS     DLS + +P+  ++    Q P
Sbjct: 128 -----QPPQVPVSSSGSLQALSITDLPTISPSV---YDLSSIFEPVMSSTWAMQQQP 175

BLAST of ClCG05G002190 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.1e-42
Identity = 81/127 (63.78%), Postives = 98/127 (77.17%), Query Frame = 1

Query: 29  GKGG-GPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHK 88
           G+GG GPCGACKFLRRKC+  C+FAPYFD+EQGT  FAAVHKVFGASN SKMLL +P HK
Sbjct: 10  GRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPLHK 69

Query: 89  RLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLAT-SELPRPAPN 148
           RLDA +T+CYEA AR+R+PV+G V H+F+LQ Q   LQ E++++QA L+T    P  +P 
Sbjct: 70  RLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPLQSPQ 129

Query: 149 LQAQPPA 154
            Q QPP+
Sbjct: 130 -QMQPPS 135

BLAST of ClCG05G002190 vs. Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 3.0e-40
Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 1

Query: 32  GGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKRLDA 91
           GGPCGACKFLRRKC+ +C+FAPYFDS +GT+HF AVHKVFGASN SK+L+ IP  +RLDA
Sbjct: 9   GGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPASRRLDA 68

Query: 92  AITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSE-LPRP--APNLQ 151
            +T+ YEA AR+R+PV+GCV HIFALQ Q   LQ E++Y+Q  L+T + LP P    N +
Sbjct: 69  VVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQGLPPPNSQNNSR 128

Query: 152 AQPPALVKKPTLSSI---VNLPSDCPSFPAESDLSRLLDPIEQASRP 193
            +  +    P +SS+    N+ S     P  S       P E    P
Sbjct: 129 TEAASSSNVPLISSVDSKDNMSSSSSHIPCMSQQQEQEQPKEAIEVP 175

BLAST of ClCG05G002190 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.3e-37
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 1

Query: 22  SRGSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLL 81
           S G+      G PCGACKFLRRKC  +CIFAPYF SEQG   FAA+HKVFGASNVSK+LL
Sbjct: 3   SSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLL 62

Query: 82  HIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLA 137
           ++P H R +A +TI YEAQAR+ +PV+GCV+HIFALQQQ A LQ ++  ++A +A
Sbjct: 63  NVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

BLAST of ClCG05G002190 vs. TrEMBL
Match: A0A0A0L4D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126090 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 4.4e-107
Identity = 197/231 (85.28%), Postives = 212/231 (91.77%), Query Frame = 1

Query: 17  MSSRRSRGSCPEGKGG------GPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKV 76
           MSSRRS GSC +GKGG      GPCGACKFLRRKCMPECIFAPYFDSEQG+THFAAVHKV
Sbjct: 1   MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKV 60

Query: 77  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISY 136
           FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPV GCV+HIFALQQQAARLQ+EISY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEISY 120

Query: 137 LQAHLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQAS 196
           LQA+LATSELPR AP+LQAQPPALVKKPTLSSI++LPSDCPSFPAESDLS LLDP+EQ S
Sbjct: 121 LQAYLATSELPRSAPHLQAQPPALVKKPTLSSIISLPSDCPSFPAESDLSLLLDPVEQVS 180

Query: 197 RPKLQSPLELSQIGSNSFPSMSSIDQQIVQKQLASMRHIGASLFPCVPKGA 242
           + KLQSPLE  QIGSN+FPSM SIDQQ+VQKQL+SM+ IGASLFP +PK A
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMGSIDQQVVQKQLSSMQRIGASLFPNIPKRA 231

BLAST of ClCG05G002190 vs. TrEMBL
Match: A0A068VAN4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003900001 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 131/232 (56.47%), Postives = 157/232 (67.67%), Query Frame = 1

Query: 12  ASKAEMSSRRSRGSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVF 71
           A+ +   S  + GS     GGGPCGACKFLRRKC+  CIFAPYFDSEQG  HFAAVHKVF
Sbjct: 3   ANTSSSPSGGAAGSSSGNTGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVF 62

Query: 72  GASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYL 131
           GASNVSK+LLHIP HKRLDA +TICYEAQAR+R+PVFGCVAHIFALQQQ   LQ E+SYL
Sbjct: 63  GASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVFGCVAHIFALQQQVVNLQAELSYL 122

Query: 132 QAHLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASR 191
           Q HLAT ELP P P   AQP  ++  P+L +I +LP+   S PA  DLS L DP+ Q   
Sbjct: 123 QGHLATLELPPPPPP-SAQPQPIIAPPSL-TIADLPTGSSSAPATYDLSSLFDPVVQLPW 182

Query: 192 PKLQSPLELS--QIGSNSFPSMSSI-----DQQIVQKQLASMRHIGASLFPC 237
             +Q P ++   Q G+   P+ +S      D Q + ++L   RH  +S  PC
Sbjct: 183 -TMQQPRQMDSHQFGAARAPAEASSSAGTGDLQELARELLH-RHRTSSTVPC 230

BLAST of ClCG05G002190 vs. TrEMBL
Match: A0A067KAC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.6e-59
Identity = 130/209 (62.20%), Postives = 148/209 (70.81%), Query Frame = 1

Query: 24  GSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHI 83
           GS   G G GPCGACKFLRRKC+P CIFAPYFDSEQG  HFAAVHKVFGASNVSK+LLHI
Sbjct: 19  GSSSSG-GSGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHI 78

Query: 84  PEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRP 143
           P HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ E++YLQAHLAT E+P P
Sbjct: 79  PVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELTYLQAHLATLEVPSP 138

Query: 144 APNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQSPLELSQI 203
            P     PPALV  P   SI +LPS   S PA  DLS L DPI Q S    Q  ++  Q 
Sbjct: 139 PPP-PPPPPALV-TPLPLSISDLPS-ASSMPATYDLSSLFDPITQPSWTMQQRQMDPRQF 198

Query: 204 GSNSFPSMSSI----DQQIVQKQLASMRH 229
           G +S  S  +I    D Q + ++L  +RH
Sbjct: 199 GGSSTSSSPAISGGGDLQSLARELL-LRH 222

BLAST of ClCG05G002190 vs. TrEMBL
Match: A0A0D2MZ41_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G161100 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.7e-58
Identity = 129/215 (60.00%), Postives = 147/215 (68.37%), Query Frame = 1

Query: 24  GSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHI 83
           GS   G GGGPCGACKFLRRKC+P CIFAPYFDSEQG  HFAAVHKVFGASNVSK+LLHI
Sbjct: 25  GSGGGGSGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHI 84

Query: 84  PEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRP 143
           P HKRLDA +TIC+EAQAR+R+PV+GCVAHIFALQQQ   LQ E+SYLQAHL T ELP P
Sbjct: 85  PVHKRLDAVVTICFEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLTTLELPSP 144

Query: 144 APNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDP-IEQASRPKLQSPLELSQ 203
            P        LV  P L SI +LPS   S PA  DLS L DP + Q S    Q  ++  Q
Sbjct: 145 PPPPPPPSQTLVAAPPL-SISDLPS-ASSVPATYDLSSLFDPMVAQTSWAMQQRQIDPRQ 204

Query: 204 I-GSNSFPSMSSIDQQIVQKQLASMRHIGASLFPC 237
             G+ S  S  S D Q + ++L  +   G+   PC
Sbjct: 205 YGGTGSASSTGSGDLQALAREL--LHRQGSPHLPC 235

BLAST of ClCG05G002190 vs. TrEMBL
Match: B9IC05_POPTR (LOB domain protein 18 OS=Populus trichocarpa GN=POPTR_0014s06600g PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.9e-58
Identity = 125/202 (61.88%), Postives = 142/202 (70.30%), Query Frame = 1

Query: 29  GKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKR 88
           G GGGPCGACKFLRRKC+P CIFAPYFDSEQG  HFAAVHKVFGASNVSK+LLHIP HKR
Sbjct: 29  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKR 88

Query: 89  LDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRPAPNLQ 148
           LDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ E+SYLQAHLA  E+P P P   
Sbjct: 89  LDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLAALEVPSPPP--- 148

Query: 149 AQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASRPKL--QSPLELSQI-GS 208
             PP LV  P L SI +LPS   S PA  DLS L DP+ Q S   +  Q  +++ Q  GS
Sbjct: 149 PPPPTLVTPPPL-SIADLPS-ASSIPAAYDLSCLFDPMMQPSWSNMQPQRQMDIRQFGGS 208

Query: 209 NSFPSMSSIDQQIVQKQLASMR 228
                    D Q + ++L   R
Sbjct: 209 GGSSGTGGGDLQALARELLHRR 225

BLAST of ClCG05G002190 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 218.4 bits (555), Expect = 4.8e-57
Identity = 107/171 (62.57%), Postives = 124/171 (72.51%), Query Frame = 1

Query: 24  GSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHI 83
           G    G GGGPCGACKFLRRKC+P CIFAPYFDSEQG+ +FAAVHKVFGASNVSK+LLHI
Sbjct: 27  GGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHI 86

Query: 84  PEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELP-- 143
           P H+R DA +TICYEAQAR+R+P++GCVAHIFALQQQ   LQ E+SYLQAHLA+ ELP  
Sbjct: 87  PVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELPQP 146

Query: 144 --RPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQAS 191
             RP P  Q QP      P L +I +LP+     P+  DL+ + D    +S
Sbjct: 147 QTRPQPMPQPQPLFFTPPPPL-AITDLPASVSPLPSTYDLASIFDQTTSSS 196

BLAST of ClCG05G002190 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 205.3 bits (521), Expect = 4.2e-53
Identity = 104/177 (58.76%), Postives = 125/177 (70.62%), Query Frame = 1

Query: 25  SCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIP 84
           S   G GGGPCGACKFLRRKC+  CIFAPYFDSEQG  HFAAVHKVFGASNVSK+L H+P
Sbjct: 8   SSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVP 67

Query: 85  EHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRPA 144
           EHKR DA ++IC+EAQAR+R+P++GCV+HI +LQQQ   LQ E+SYLQAHLAT ELP+P 
Sbjct: 68  EHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELPQP- 127

Query: 145 PNLQAQPPALVKKPTLS----SIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQSP 198
                QPP +    + S    SI +LP+  PS     DLS + +P+  ++    Q P
Sbjct: 128 -----QPPQVPVSSSGSLQALSITDLPTISPSV---YDLSSIFEPVMSSTWAMQQQP 175

BLAST of ClCG05G002190 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19)

HSP 1 Score: 172.2 bits (435), Expect = 4.0e-43
Identity = 81/127 (63.78%), Postives = 98/127 (77.17%), Query Frame = 1

Query: 29  GKGG-GPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHK 88
           G+GG GPCGACKFLRRKC+  C+FAPYFD+EQGT  FAAVHKVFGASN SKMLL +P HK
Sbjct: 10  GRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPLHK 69

Query: 89  RLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLAT-SELPRPAPN 148
           RLDA +T+CYEA AR+R+PV+G V H+F+LQ Q   LQ E++++QA L+T    P  +P 
Sbjct: 70  RLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPLQSPQ 129

Query: 149 LQAQPPA 154
            Q QPP+
Sbjct: 130 -QMQPPS 135

BLAST of ClCG05G002190 vs. TAIR10
Match: AT4G00210.1 (AT4G00210.1 LOB domain-containing protein 31)

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-41
Identity = 85/167 (50.90%), Postives = 107/167 (64.07%), Query Frame = 1

Query: 32  GGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKRLDA 91
           GGPCGACKFLRRKC+ +C+FAPYFDS +GT+HF AVHKVFGASN SK+L+ IP  +RLDA
Sbjct: 9   GGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPASRRLDA 68

Query: 92  AITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSE-LPRP--APNLQ 151
            +T+ YEA AR+R+PV+GCV HIFALQ Q   LQ E++Y+Q  L+T + LP P    N +
Sbjct: 69  VVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQGLPPPNSQNNSR 128

Query: 152 AQPPALVKKPTLSSI---VNLPSDCPSFPAESDLSRLLDPIEQASRP 193
            +  +    P +SS+    N+ S     P  S       P E    P
Sbjct: 129 TEAASSSNVPLISSVDSKDNMSSSSSHIPCMSQQQEQEQPKEAIEVP 175

BLAST of ClCG05G002190 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-38
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 1

Query: 22  SRGSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLL 81
           S G+      G PCGACKFLRRKC  +CIFAPYF SEQG   FAA+HKVFGASNVSK+LL
Sbjct: 3   SSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLL 62

Query: 82  HIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLA 137
           ++P H R +A +TI YEAQAR+ +PV+GCV+HIFALQQQ A LQ ++  ++A +A
Sbjct: 63  NVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

BLAST of ClCG05G002190 vs. NCBI nr
Match: gi|659075449|ref|XP_008438149.1| (PREDICTED: LOB domain-containing protein 18 [Cucumis melo])

HSP 1 Score: 398.7 bits (1023), Expect = 7.4e-108
Identity = 200/229 (87.34%), Postives = 211/229 (92.14%), Query Frame = 1

Query: 17  MSSRRSRGSCPEGKGG------GPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKV 76
           MSSRRS GSC +GKGG      GPCGACKFLRRKC PECIFAPYFDSEQGTTHFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 77  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISY 136
           FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQQQAARLQ+EISY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAARLQIEISY 120

Query: 137 LQAHLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQAS 196
           LQ +LATSELPRPAP+LQAQPPALVKKPTLSSIV+LPSDCPSFPAESDLS LLDP+EQAS
Sbjct: 121 LQGYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFPAESDLSLLLDPVEQAS 180

Query: 197 RPKLQSPLELSQIGSNSFPSMSSIDQQIVQKQLASMRHIGASLFPCVPK 240
           + KLQSPLE  QIGSN+FPSM SIDQQ+VQKQL+SM+ IGASLFP VPK
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMVSIDQQVVQKQLSSMQRIGASLFPNVPK 229

BLAST of ClCG05G002190 vs. NCBI nr
Match: gi|449433121|ref|XP_004134346.1| (PREDICTED: LOB domain-containing protein 18 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 6.3e-107
Identity = 197/231 (85.28%), Postives = 212/231 (91.77%), Query Frame = 1

Query: 17  MSSRRSRGSCPEGKGG------GPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKV 76
           MSSRRS GSC +GKGG      GPCGACKFLRRKCMPECIFAPYFDSEQG+THFAAVHKV
Sbjct: 1   MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKV 60

Query: 77  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISY 136
           FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPV GCV+HIFALQQQAARLQ+EISY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEISY 120

Query: 137 LQAHLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQAS 196
           LQA+LATSELPR AP+LQAQPPALVKKPTLSSI++LPSDCPSFPAESDLS LLDP+EQ S
Sbjct: 121 LQAYLATSELPRSAPHLQAQPPALVKKPTLSSIISLPSDCPSFPAESDLSLLLDPVEQVS 180

Query: 197 RPKLQSPLELSQIGSNSFPSMSSIDQQIVQKQLASMRHIGASLFPCVPKGA 242
           + KLQSPLE  QIGSN+FPSM SIDQQ+VQKQL+SM+ IGASLFP +PK A
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMGSIDQQVVQKQLSSMQRIGASLFPNIPKRA 231

BLAST of ClCG05G002190 vs. NCBI nr
Match: gi|661878479|emb|CDP17781.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 238.0 bits (606), Expect = 1.7e-59
Identity = 131/232 (56.47%), Postives = 157/232 (67.67%), Query Frame = 1

Query: 12  ASKAEMSSRRSRGSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVF 71
           A+ +   S  + GS     GGGPCGACKFLRRKC+  CIFAPYFDSEQG  HFAAVHKVF
Sbjct: 3   ANTSSSPSGGAAGSSSGNTGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVF 62

Query: 72  GASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYL 131
           GASNVSK+LLHIP HKRLDA +TICYEAQAR+R+PVFGCVAHIFALQQQ   LQ E+SYL
Sbjct: 63  GASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVFGCVAHIFALQQQVVNLQAELSYL 122

Query: 132 QAHLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASR 191
           Q HLAT ELP P P   AQP  ++  P+L +I +LP+   S PA  DLS L DP+ Q   
Sbjct: 123 QGHLATLELPPPPPP-SAQPQPIIAPPSL-TIADLPTGSSSAPATYDLSSLFDPVVQLPW 182

Query: 192 PKLQSPLELS--QIGSNSFPSMSSI-----DQQIVQKQLASMRHIGASLFPC 237
             +Q P ++   Q G+   P+ +S      D Q + ++L   RH  +S  PC
Sbjct: 183 -TMQQPRQMDSHQFGAARAPAEASSSAGTGDLQELARELLH-RHRTSSTVPC 230

BLAST of ClCG05G002190 vs. NCBI nr
Match: gi|802699504|ref|XP_012083561.1| (PREDICTED: LOB domain-containing protein 18 [Jatropha curcas])

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58
Identity = 130/209 (62.20%), Postives = 148/209 (70.81%), Query Frame = 1

Query: 24  GSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHI 83
           GS   G G GPCGACKFLRRKC+P CIFAPYFDSEQG  HFAAVHKVFGASNVSK+LLHI
Sbjct: 19  GSSSSG-GSGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHI 78

Query: 84  PEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRP 143
           P HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ E++YLQAHLAT E+P P
Sbjct: 79  PVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELTYLQAHLATLEVPSP 138

Query: 144 APNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQSPLELSQI 203
            P     PPALV  P   SI +LPS   S PA  DLS L DPI Q S    Q  ++  Q 
Sbjct: 139 PPP-PPPPPALV-TPLPLSISDLPS-ASSMPATYDLSSLFDPITQPSWTMQQRQMDPRQF 198

Query: 204 GSNSFPSMSSI----DQQIVQKQLASMRH 229
           G +S  S  +I    D Q + ++L  +RH
Sbjct: 199 GGSSTSSSPAISGGGDLQSLARELL-LRH 222

BLAST of ClCG05G002190 vs. NCBI nr
Match: gi|743788802|ref|XP_011034497.1| (PREDICTED: LOW QUALITY PROTEIN: LOB domain-containing protein 18 [Populus euphratica])

HSP 1 Score: 235.0 bits (598), Expect = 1.4e-58
Identity = 126/202 (62.38%), Postives = 142/202 (70.30%), Query Frame = 1

Query: 29  GKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKR 88
           G GGGPCGACKFLRRKC+P CIFAPYFDSEQG  HFAAVHKVFGASNVSK+LLHIP HKR
Sbjct: 28  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKR 87

Query: 89  LDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAHLATSELPRPAPNLQ 148
           LDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ E+SYLQAHLA  E+P P P   
Sbjct: 88  LDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLAALEVPSPPP--- 147

Query: 149 AQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQS--PLELSQIG-S 208
             PP LV  P L SI +LPS   S PA  DLS L DP+ Q S   +Q    ++  Q G S
Sbjct: 148 PPPPTLVTPPPL-SIADLPS-ASSIPAAYDLSSLFDPMMQPSWSNMQQQRQMDTRQFGDS 207

Query: 209 NSFPSMSSIDQQIVQKQLASMR 228
                 S  D Q + ++L   R
Sbjct: 208 GGSSGTSGGDLQALARELLHRR 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LBD18_ARATH8.6e-5662.57LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD30_ARATH7.5e-5258.76LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD19_ARATH7.1e-4263.78LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1[more]
LBD31_ARATH3.0e-4050.90LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2[more]
LBD16_ARATH2.3e-3762.61LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L4D4_CUCSA4.4e-10785.28Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126090 PE=4 SV=1[more]
A0A068VAN4_COFCA1.2e-5956.47Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003900001 PE=4 SV=1[more]
A0A067KAC7_JATCU7.6e-5962.20Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1[more]
A0A0D2MZ41_GOSRA1.7e-5860.00Uncharacterized protein OS=Gossypium raimondii GN=B456_004G161100 PE=4 SV=1[more]
B9IC05_POPTR2.9e-5861.88LOB domain protein 18 OS=Populus trichocarpa GN=POPTR_0014s06600g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G45420.14.8e-5762.57 LOB domain-containing protein 18[more]
AT4G00220.14.2e-5358.76 Lateral organ boundaries (LOB) domain family protein[more]
AT2G45410.14.0e-4363.78 LOB domain-containing protein 19[more]
AT4G00210.11.7e-4150.90 LOB domain-containing protein 31[more]
AT2G42430.11.3e-3862.61 lateral organ boundaries-domain 16[more]
Match NameE-valueIdentityDescription
gi|659075449|ref|XP_008438149.1|7.4e-10887.34PREDICTED: LOB domain-containing protein 18 [Cucumis melo][more]
gi|449433121|ref|XP_004134346.1|6.3e-10785.28PREDICTED: LOB domain-containing protein 18 [Cucumis sativus][more]
gi|661878479|emb|CDP17781.1|1.7e-5956.47unnamed protein product [Coffea canephora][more]
gi|802699504|ref|XP_012083561.1|1.1e-5862.20PREDICTED: LOB domain-containing protein 18 [Jatropha curcas][more]
gi|743788802|ref|XP_011034497.1|1.4e-5862.38PREDICTED: LOW QUALITY PROTEIN: LOB domain-containing protein 18 [Populus euphra... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010089 xylem development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010015 root morphogenesis
biological_process GO:0090558 plant epidermis development
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0048468 cell development
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010311 lateral root formation
biological_process GO:0071555 cell wall organization
biological_process GO:0044036 cell wall macromolecule metabolic process
biological_process GO:0007155 cell adhesion
biological_process GO:0045010 actin nucleation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G002190.1ClCG05G002190.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 34..132
score: 1.0
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 33..135
score: 22
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 7..195
score: 3.8
NoneNo IPR availablePANTHERPTHR31529:SF3LOB DOMAIN-CONTAINING PROTEIN 18-RELATEDcoord: 7..195
score: 3.8

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G002190Csa3G126090Cucumber (Chinese Long) v2cuwcgB222
ClCG05G002190Csa6G076840Cucumber (Chinese Long) v2cuwcgB470
ClCG05G002190MELO3C006183Melon (DHL92) v3.5.1mewcgB427
ClCG05G002190MELO3C022505Melon (DHL92) v3.5.1mewcgB122
ClCG05G002190Cla006955Watermelon (97103) v1wcgwmB309
ClCG05G002190Cla021305Watermelon (97103) v1wcgwmB286
ClCG05G002190Cla97C05G082710Watermelon (97103) v2wcgwmbB229
ClCG05G002190Cla97C06G109600Watermelon (97103) v2wcgwmbB234
ClCG05G002190Bhi12G002303Wax gourdwcgwgoB416
ClCG05G002190Bhi01G000191Wax gourdwcgwgoB442
ClCG05G002190CSPI06G05820Wild cucumber (PI 183967)cpiwcgB494
ClCG05G002190CSPI03G09510Wild cucumber (PI 183967)cpiwcgB226
ClCG05G002190Cucsa.362840Cucumber (Gy14) v1cgywcgB617
ClCG05G002190CmaCh17G000280Cucurbita maxima (Rimu)cmawcgB319
ClCG05G002190CmaCh08G009530Cucurbita maxima (Rimu)cmawcgB798
ClCG05G002190CmoCh08G009210Cucurbita moschata (Rifu)cmowcgB793
ClCG05G002190CmoCh17G000310Cucurbita moschata (Rifu)cmowcgB315
ClCG05G002190Lsi09G019000Bottle gourd (USVL1VR-Ls)lsiwcgB022
ClCG05G002190Lsi05G019640Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G002190Cp4.1LG12g00260Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G002190CsGy3G009580Cucumber (Gy14) v2cgybwcgB203
ClCG05G002190CsGy6G005800Cucumber (Gy14) v2cgybwcgB431
ClCG05G002190MELO3C006183.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G002190MELO3C022505.2Melon (DHL92) v3.6.1medwcgB117
ClCG05G002190Carg14831Silver-seed gourdcarwcgB0602
ClCG05G002190Carg10203Silver-seed gourdcarwcgB0220
ClCG05G002190CsaV3_3G009630Cucumber (Chinese Long) v3cucwcgB225
ClCG05G002190CsaV3_6G006130Cucumber (Chinese Long) v3cucwcgB490
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG05G002190ClCG06G000340Watermelon (Charleston Gray)wcgwcgB156
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G002190Silver-seed gourdcarwcgB0472
ClCG05G002190Wax gourdwcgwgoB428
ClCG05G002190Cucumber (Gy14) v1cgywcgB451
ClCG05G002190Cucurbita maxima (Rimu)cmawcgB233
ClCG05G002190Cucurbita maxima (Rimu)cmawcgB737
ClCG05G002190Cucurbita moschata (Rifu)cmowcgB219
ClCG05G002190Cucurbita moschata (Rifu)cmowcgB743
ClCG05G002190Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G002190Cucurbita pepo (Zucchini)cpewcgB787