CmoCh17G000310 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G000310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	LOB domain-containing 18-like protein
Location	Cmo_Chr17 : 140116 .. 141390 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCCATGTGGGGCGTGCAAGTTTTTGAGAAGAAAGTGTATTCCTGGTTGCATATTTGCGCCGTACTTCGACTCGGAGCAAGGCGCTGGGCACTTCGCCGCGGTGCACAAGGTGTTTGGAGCCAGCAATGTGTCCAAGCTCCTCCTTCATATCCCGGTTCACAAGCGCCTCGATGCTGTCGTCACCATTTGCTACGAGTCTCAAGCCCGCCTTCGAGACCCTGTCTATGGCTGCGTCGCCCACATCTTCGCTCTCCAACGACAGGTCAACTCAACTCAACTATTTTCCTTTTTTTTTATTTATTTATTATTATTCAAATAAATACTTCTCCTTTTCCAATTTCAATTATTTCTTCAAATGGGATCTAATTACGGTTCTTATGCCCTTAATTTTTTTTTCTTGTTTTAGATTATGATTTTCGCAGTTATTAAGGAATTGGGCGGTCTACTGCCTTAAAGTTAAGCTTTTTATTAGAGGGACAAGATTTATTTCTTATGTTTCCCCAATTTTCAGCTTCTTGTCAGTGTTTCTAACCCAAAACATATTTTTCTTTTTATTAATCTTTGTATTTTGTTTCTTATAACGTTTTTTTTTTTTAAAAAAAATAAAGCTACTTTTTTTTTTAATACCTAATATGTATACTGCATATTAGCAATACCTACTACGTAAATATCTATGTACTATTAACAGTATGGTAGGTAAATTTGTTTTTTTTTTTCTTTGTAAATAGTACAAAAATGAAATTAAAAAAAATATATATAATTTTATATTTTCTAACTGCAAAAAGCTTACAAGTGTAAAGTAGTTCTGTAAGATTGAATTAGAAGCTTAAAATGTTTAACTTTGTAGGTGGTGAGTTTACAAGCCGAGCTGTCGTACCTTCAAGCTCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCTCCGCCGCCAAATTTTGCGGTGCAACCACCGGTGTCCATCTCAGACCTGCCGTCGGCTTCCTCCCTACCGGTCACTTACGACTTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCATCGCCAGTTCTCCAGTGGTGGTGCTGGCGGTTCATCCACAACGGCGGGAGAGGGCGATCTTCAAGCCCTGGCCCGCGCACTCCTCCATAGACATGGCGGTCCGCCGTGCTCCGATGCCTCGTCGCCGCCATCGCTCTCTAAATGA

mRNA sequence

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCCATGTGGGGCGTGCAAGTTTTTGAGAAGAAAGTGTATTCCTGGTTGCATATTTGCGCCGTACTTCGACTCGGAGCAAGGCGCTGGGCACTTCGCCGCGGTGCACAAGGTGTTTGGAGCCAGCAATGTGTCCAAGCTCCTCCTTCATATCCCGGTTCACAAGCGCCTCGATGCTGTCGTCACCATTTGCTACGAGTCTCAAGCCCGCCTTCGAGACCCTGTCTATGGCTGCGTCGCCCACATCTTCGCTCTCCAACGACAGGTGGTGAGTTTACAAGCCGAGCTGTCGTACCTTCAAGCTCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCTCCGCCGCCAAATTTTGCGGTGCAACCACCGGTGTCCATCTCAGACCTGCCGTCGGCTTCCTCCCTACCGGTCACTTACGACTTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCATCGCCAGTTCTCCAGTGGTGGTGCTGGCGGTTCATCCACAACGGCGGGAGAGGGCGATCTTCAAGCCCTGGCCCGCGCACTCCTCCATAGACATGGCGGTCCGCCGTGCTCCGATGCCTCGTCGCCGCCATCGCTCTCTAAATGA

Coding sequence (CDS)

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCCATGTGGGGCGTGCAAGTTTTTGAGAAGAAAGTGTATTCCTGGTTGCATATTTGCGCCGTACTTCGACTCGGAGCAAGGCGCTGGGCACTTCGCCGCGGTGCACAAGGTGTTTGGAGCCAGCAATGTGTCCAAGCTCCTCCTTCATATCCCGGTTCACAAGCGCCTCGATGCTGTCGTCACCATTTGCTACGAGTCTCAAGCCCGCCTTCGAGACCCTGTCTATGGCTGCGTCGCCCACATCTTCGCTCTCCAACGACAGGTGGTGAGTTTACAAGCCGAGCTGTCGTACCTTCAAGCTCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCTCCGCCGCCAAATTTTGCGGTGCAACCACCGGTGTCCATCTCAGACCTGCCGTCGGCTTCCTCCCTACCGGTCACTTACGACTTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCATCGCCAGTTCTCCAGTGGTGGTGCTGGCGGTTCATCCACAACGGCGGGAGAGGGCGATCTTCAAGCCCTGGCCCGCGCACTCCTCCATAGACATGGCGGTCCGCCGTGCTCCGATGCCTCGTCGCCGCCATCGCTCTCTAAATGA

Homology

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BLAST of CmoCh17G000310 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 4.8e-72
Identity = 153/233 (65.67%), Postives = 174/233 (74.68%), Query Frame = 1


Query: 11  GGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLL 70
           GGGG  GGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQG+ +FAAVHKVFGASNVSKLLL
Sbjct: 25  GGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLL 84

Query: 71  HIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATLELP 130
           HIPVH+R DAVVTICYE+QAR+RDP+YGCVAHIFALQ+QVV+LQAE+SYLQAHLA+LELP
Sbjct: 85  HIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELP 144

Query: 131 SP---------PPPPNFAVQPPVSISDLP-SASSLPVTYDLSSLFD-PMAQPAWAMQQQR 190
            P         P P  F   PP++I+DLP S S LP TYDL+S+FD   +  AWA QQ+R
Sbjct: 145 QPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQTTSSSAWATQQRR 204

Query: 191 -LDHRQFSSGGAGGSSTTAGEG-----DLQALARALLHRHGGPPCSDASSPPS 227
            +D R      +  SS   G G     DLQALA  LLHR G PP +     PS
Sbjct: 205 FIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHELLHRQGSPPPAATDHSPS 257

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BLAST of CmoCh17G000310 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.9e-63
Identity = 136/209 (65.07%), Postives = 154/209 (73.68%), Query Frame = 1


Query: 8   SGGGGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSK 67
           S  G      GGGGGPCGACKFLRRKC+ GCIFAPYFDSEQGA HFAAVHKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 68  LLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATL 127
           LL H+P HKR DAVV+IC+E+QARLRDP+YGCV+HI +LQ+QVVSLQ ELSYLQAHLATL
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATL 121

Query: 128 ELPSPPPP----PNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQ-RLDH 187
           ELP P PP     +      +SI+DLP+ S  P  YDLSS+F+P+    WAMQQQ R   
Sbjct: 122 ELPQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSSIFEPVMSSTWAMQQQPRPSD 181

Query: 188 RQFSSGGAGGSSTTAGEGDLQALARALLH 212
             F   G   SS   G G+LQALAR  +H
Sbjct: 182 HLF---GVPSSSNMGGGGELQALAREFIH 205

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BLAST of CmoCh17G000310 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-43
Identity = 103/203 (50.74%), Postives = 129/203 (63.55%), Query Frame = 1


Query: 11  GGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLL 70
           G   GGG GG GPCGACKFLRRKC+ GC+FAPYFD+EQG   FAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 71  HIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATLELP 130
            +P+HKRLDAVVT+CYE+ AR+RDPVYG V H+F+LQ QV++LQAEL+++QA L+T++  
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQ-- 123

Query: 131 SPPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQRLDHRQFSSGGA 190
                  F +Q P  +   PS             FDP     +AM+   LD      G  
Sbjct: 124 ------RFPLQSPQQMQP-PS-------------FDPAHNNEYAMEPSNLDS---VWGEE 181

Query: 191 GGSSTTAGEGDLQALARALLHRH 214
                  G+GD Q LA   + R+
Sbjct: 184 HLLQDGTGDGDFQELASQFVSRY 181

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BLAST of CmoCh17G000310 vs. Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.0e-42
Identity = 103/208 (49.52%), Postives = 132/208 (63.46%), Query Frame = 1


Query: 15  GGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLLHIPV 74
           G   G GGPCGACKFLRRKC+  C+FAPYFDS +G  HF AVHKVFGASN SKLL+ IP 
Sbjct: 3   GSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPA 62

Query: 75  HKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATLELPSPPP 134
            +RLDAVVT+ YE+ ARLRDPVYGCV HIFALQ QV++LQAEL+Y+Q  L+TL+   PP 
Sbjct: 63  SRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQGLPPPN 122

Query: 135 PPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQRLDHRQF--------- 194
             N +     S S++P  SS+    ++SS    +  P  + QQ++   ++          
Sbjct: 123 SQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHI--PCMSQQQEQEQPKEAIEVPTESVD 182

Query: 195 SSGGAGGSSTTAGEGDLQALARALLHRH 214
            S   G  +    +GDL ALAR    ++
Sbjct: 183 LSTFFGLENPVDEDGDLNALAREFFTKY 208

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BLAST of CmoCh17G000310 vs. Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.1e-39
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1


Query: 21  GGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLLHIPVHKRLDA 80
           G PCGACKFLRRKC  GC+FAPYF  EQGA HFAA+HKVFGASN SKLL H+P+  R +A
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 81  VVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLA 126
            +TI YE+QARL+DP+YGCV+HIFALQ+QVV+LQAEL  L+   A
Sbjct: 69  AITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAA 113

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BLAST of CmoCh17G000310 vs. TrEMBL
Match: A0A0A0KEN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076840 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.9e-105
Identity = 207/241 (85.89%), Postives = 214/241 (88.80%), Query Frame = 1


Query: 1   MSANPSTSGGGG------GGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFA 60
           MSANPSTSGGGG      GG  G GGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFA
Sbjct: 1   MSANPSTSGGGGPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELSYLQAHLATLELPSPP------PPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPM 180
           AEL+YLQAHLATLELPSPP      PPP+F  QPP+SISDLPSASSLP TYDLSSLFDPM
Sbjct: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPM 180

Query: 181 AQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGPPCSDASSPPSLS 230
           AQPAWAMQQQRLDHRQF+ GG GGSST  GEGDLQALAR LL RHG PPCSDASSP SLS
Sbjct: 181 AQPAWAMQQQRLDHRQFAGGG-GGSSTAPGEGDLQALARELLLRHGAPPCSDASSPQSLS 240

[Close]

BLAST of CmoCh17G000310 vs. TrEMBL
Match: W9QS27_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022439 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 3.1e-94
Identity = 188/235 (80.00%), Postives = 203/235 (86.38%), Query Frame = 1


Query: 4   NPSTSGGGGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGAS 63
           NPS+S GGGGGGGG GGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFAAVHKVFGAS
Sbjct: 6   NPSSSSGGGGGGGGVGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGAS 65

Query: 64  NVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAH 123
           NVSKLLLHIPVHKRLDAVVT+CYE+QARLRDPVYGCVAHIFALQ+QVVSLQ ELSYLQAH
Sbjct: 66  NVSKLLLHIPVHKRLDAVVTVCYEAQARLRDPVYGCVAHIFALQQQVVSLQTELSYLQAH 125

Query: 124 LATLELPS----PPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQR 183
           LATLELPS    PPPPP+    PP+SI+DLPSASS+P TYDLSSLF+P+ QP W+MQQ++
Sbjct: 126 LATLELPSPPPAPPPPPSSLNPPPLSIADLPSASSVPATYDLSSLFEPIVQP-WSMQQRQ 185

Query: 184 LDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGP-----PCSDASSPPSLSK 230
           LD RQF  G  G SST+ G GDLQALAR LLHRHG P     PCSDAS  PSLSK
Sbjct: 186 LDPRQF-GGSTGSSSTSGGGGDLQALARELLHRHGSPPHGPVPCSDASQSPSLSK 238

[Close]

BLAST of CmoCh17G000310 vs. TrEMBL
Match: B9IC05_POPTR (LOB domain protein 18 OS=Populus trichocarpa GN=POPTR_0014s06600g PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.5e-90
Identity = 184/233 (78.97%), Postives = 199/233 (85.41%), Query Frame = 1


Query: 6   STSGGGGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNV 65
           S+ GGGGGGGGGGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFAAVHKVFGASNV
Sbjct: 17  SSGGGGGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNV 76

Query: 66  SKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLA 125
           SKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QVV+LQAELSYLQAHLA
Sbjct: 77  SKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLA 136

Query: 126 TLELPS--PPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWA-MQQQR-LD 185
            LE+PS  PPPPP     PP+SI+DLPSASS+P  YDLS LFDPM QP+W+ MQ QR +D
Sbjct: 137 ALEVPSPPPPPPPTLVTPPPLSIADLPSASSIPAAYDLSCLFDPMMQPSWSNMQPQRQMD 196

Query: 186 HRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGPP-----CSDASSPPSLSK 230
            RQF  GG+GGSS T G GDLQALAR LLHR G PP     CSD  + PS+SK
Sbjct: 197 IRQF--GGSGGSSGTGG-GDLQALARELLHRRGSPPPGFMSCSDTLASPSISK 246

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BLAST of CmoCh17G000310 vs. TrEMBL
Match: A0A0B0NJT7_GOSAR (LOB domain-containing 18-like protein OS=Gossypium arboreum GN=F383_20283 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 7.9e-90
Identity = 188/248 (75.81%), Postives = 205/248 (82.66%), Query Frame = 1


Query: 1   MSANPSTSGG--GGG----------GGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQ 60
           MS+NPS SGG  GGG          GGGGGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQ
Sbjct: 1   MSSNPSNSGGSVGGGSGSCSGSAAAGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAGHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQR 120
           GA HFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTIC+E+QARLRDPVYGCVAHIFALQ+
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICFEAQARLRDPVYGCVAHIFALQQ 120

Query: 121 QVVSLQAELSYLQAHLATLELPSPPPPP-----NFAVQPPVSISDLPSASSLPVTYDLSS 180
           QVV+LQAELSYLQAHL TLELPSPPPPP          PP+SISDLPSASS+P TYDLSS
Sbjct: 121 QVVNLQAELSYLQAHLTTLELPSPPPPPPPPSQTLVAAPPLSISDLPSASSVPATYDLSS 180

Query: 181 LFDPM-AQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGP--PCSD 229
           LFDPM AQ +WAMQQ+++D RQ+  GG G +S+T G GDLQALAR LLHR G P  PC+D
Sbjct: 181 LFDPMVAQTSWAMQQRQIDPRQY--GGTGSASST-GSGDLQALARELLHRQGSPHLPCTD 240

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BLAST of CmoCh17G000310 vs. TrEMBL
Match: A0A059C3F2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01414 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-89
Identity = 186/244 (76.23%), Postives = 202/244 (82.79%), Query Frame = 1


Query: 1   MSANPSTSGGGGGGGGG---GGG-------GGPCGACKFLRRKCIPGCIFAPYFDSEQGA 60
           MS+NPS+SGGGGGGGGG   GGG       GGPCGACKFLRRKC+PGCIFAPYFDSEQGA
Sbjct: 1   MSSNPSSSGGGGGGGGGSGSGGGSGSGSGSGGPCGACKFLRRKCVPGCIFAPYFDSEQGA 60

Query: 61  GHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQV 120
            HFAAVHKVFGASNVSKLLLHIPVH+RLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QV
Sbjct: 61  AHFAAVHKVFGASNVSKLLLHIPVHRRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQV 120

Query: 121 VSLQAELSYLQAHLATLEL--PSPPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPM 180
           V+LQAELSYLQAHL TLEL  P PPPPP  A+ P +SI+DLPSASS+P TYDLSSLFDPM
Sbjct: 121 VNLQAELSYLQAHLTTLELPVPLPPPPPPPAMGPQLSIADLPSASSIPATYDLSSLFDPM 180

Query: 181 AQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGPP--CSDA-SSPP 230
           AQ AW + Q+++D RQF     GG S+ AG GDL ALAR LL R G PP  C DA SSP 
Sbjct: 181 AQAAWMVPQRQIDFRQFEGSCGGGGSSAAGGGDLNALARELLRRQGSPPPGCIDAMSSPS 240

[Close]

BLAST of CmoCh17G000310 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-73
Identity = 153/233 (65.67%), Postives = 174/233 (74.68%), Query Frame = 1


Query: 11  GGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLL 70
           GGGG  GGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQG+ +FAAVHKVFGASNVSKLLL
Sbjct: 25  GGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLL 84

Query: 71  HIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATLELP 130
           HIPVH+R DAVVTICYE+QAR+RDP+YGCVAHIFALQ+QVV+LQAE+SYLQAHLA+LELP
Sbjct: 85  HIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELP 144

Query: 131 SP---------PPPPNFAVQPPVSISDLP-SASSLPVTYDLSSLFD-PMAQPAWAMQQQR 190
            P         P P  F   PP++I+DLP S S LP TYDL+S+FD   +  AWA QQ+R
Sbjct: 145 QPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQTTSSSAWATQQRR 204

Query: 191 -LDHRQFSSGGAGGSSTTAGEG-----DLQALARALLHRHGGPPCSDASSPPS 227
            +D R      +  SS   G G     DLQALA  LLHR G PP +     PS
Sbjct: 205 FIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHELLHRQGSPPPAATDHSPS 257

[Close]

BLAST of CmoCh17G000310 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 241.9 bits (616), Expect = 3.9e-64
Identity = 136/209 (65.07%), Postives = 154/209 (73.68%), Query Frame = 1


Query: 8   SGGGGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSK 67
           S  G      GGGGGPCGACKFLRRKC+ GCIFAPYFDSEQGA HFAAVHKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 68  LLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATL 127
           LL H+P HKR DAVV+IC+E+QARLRDP+YGCV+HI +LQ+QVVSLQ ELSYLQAHLATL
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATL 121

Query: 128 ELPSPPPP----PNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQ-RLDH 187
           ELP P PP     +      +SI+DLP+ S  P  YDLSS+F+P+    WAMQQQ R   
Sbjct: 122 ELPQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSSIFEPVMSSTWAMQQQPRPSD 181

Query: 188 RQFSSGGAGGSSTTAGEGDLQALARALLH 212
             F   G   SS   G G+LQALAR  +H
Sbjct: 182 HLF---GVPSSSNMGGGGELQALAREFIH 205

[Close]

BLAST of CmoCh17G000310 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19)

HSP 1 Score: 177.6 bits (449), Expect = 9.0e-45
Identity = 103/203 (50.74%), Postives = 129/203 (63.55%), Query Frame = 1


Query: 11  GGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLL 70
           G   GGG GG GPCGACKFLRRKC+ GC+FAPYFD+EQG   FAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 71  HIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATLELP 130
            +P+HKRLDAVVT+CYE+ AR+RDPVYG V H+F+LQ QV++LQAEL+++QA L+T++  
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQ-- 123

Query: 131 SPPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQRLDHRQFSSGGA 190
                  F +Q P  +   PS             FDP     +AM+   LD      G  
Sbjct: 124 ------RFPLQSPQQMQP-PS-------------FDPAHNNEYAMEPSNLDS---VWGEE 181

Query: 191 GGSSTTAGEGDLQALARALLHRH 214
                  G+GD Q LA   + R+
Sbjct: 184 HLLQDGTGDGDFQELASQFVSRY 181

[Close]

BLAST of CmoCh17G000310 vs. TAIR10
Match: AT4G00210.1 (AT4G00210.1 LOB domain-containing protein 31)

HSP 1 Score: 173.3 bits (438), Expect = 1.7e-43
Identity = 103/208 (49.52%), Postives = 132/208 (63.46%), Query Frame = 1


Query: 15  GGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLLHIPV 74
           G   G GGPCGACKFLRRKC+  C+FAPYFDS +G  HF AVHKVFGASN SKLL+ IP 
Sbjct: 3   GSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPA 62

Query: 75  HKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLATLELPSPPP 134
            +RLDAVVT+ YE+ ARLRDPVYGCV HIFALQ QV++LQAEL+Y+Q  L+TL+   PP 
Sbjct: 63  SRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQGLPPPN 122

Query: 135 PPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQRLDHRQF--------- 194
             N +     S S++P  SS+    ++SS    +  P  + QQ++   ++          
Sbjct: 123 SQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHI--PCMSQQQEQEQPKEAIEVPTESVD 182

Query: 195 SSGGAGGSSTTAGEGDLQALARALLHRH 214
            S   G  +    +GDL ALAR    ++
Sbjct: 183 LSTFFGLENPVDEDGDLNALAREFFTKY 208

[Close]

BLAST of CmoCh17G000310 vs. TAIR10
Match: AT3G58190.1 (AT3G58190.1 lateral organ boundaries-domain 29)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1


Query: 21  GGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNVSKLLLHIPVHKRLDA 80
           G PCGACKFLRRKC  GC+FAPYF  EQGA HFAA+HKVFGASN SKLL H+P+  R +A
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 81  VVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLA 126
            +TI YE+QARL+DP+YGCV+HIFALQ+QVV+LQAEL  L+   A
Sbjct: 69  AITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAA 113

[Close]

BLAST of CmoCh17G000310 vs. NCBI nr
Match: gi|449454632|ref|XP_004145058.1| (PREDICTED: LOB domain-containing protein 18-like [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 5.6e-105
Identity = 207/241 (85.89%), Postives = 214/241 (88.80%), Query Frame = 1


Query: 1   MSANPSTSGGGG------GGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFA 60
           MSANPSTSGGGG      GG  G GGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFA
Sbjct: 1   MSANPSTSGGGGPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELSYLQAHLATLELPSPP------PPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPM 180
           AEL+YLQAHLATLELPSPP      PPP+F  QPP+SISDLPSASSLP TYDLSSLFDPM
Sbjct: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPM 180

Query: 181 AQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGPPCSDASSPPSLS 230
           AQPAWAMQQQRLDHRQF+ GG GGSST  GEGDLQALAR LL RHG PPCSDASSP SLS
Sbjct: 181 AQPAWAMQQQRLDHRQFAGGG-GGSSTAPGEGDLQALARELLLRHGAPPCSDASSPQSLS 240

[Close]

BLAST of CmoCh17G000310 vs. NCBI nr
Match: gi|703085826|ref|XP_010092844.1| (hypothetical protein L484_022439 [Morus notabilis])

HSP 1 Score: 352.8 bits (904), Expect = 4.4e-94
Identity = 188/235 (80.00%), Postives = 203/235 (86.38%), Query Frame = 1


Query: 4   NPSTSGGGGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGAS 63
           NPS+S GGGGGGGG GGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFAAVHKVFGAS
Sbjct: 6   NPSSSSGGGGGGGGVGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGAS 65

Query: 64  NVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAH 123
           NVSKLLLHIPVHKRLDAVVT+CYE+QARLRDPVYGCVAHIFALQ+QVVSLQ ELSYLQAH
Sbjct: 66  NVSKLLLHIPVHKRLDAVVTVCYEAQARLRDPVYGCVAHIFALQQQVVSLQTELSYLQAH 125

Query: 124 LATLELPS----PPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWAMQQQR 183
           LATLELPS    PPPPP+    PP+SI+DLPSASS+P TYDLSSLF+P+ QP W+MQQ++
Sbjct: 126 LATLELPSPPPAPPPPPSSLNPPPLSIADLPSASSVPATYDLSSLFEPIVQP-WSMQQRQ 185

Query: 184 LDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGP-----PCSDASSPPSLSK 230
           LD RQF  G  G SST+ G GDLQALAR LLHRHG P     PCSDAS  PSLSK
Sbjct: 186 LDPRQF-GGSTGSSSTSGGGGDLQALARELLHRHGSPPHGPVPCSDASQSPSLSK 238

[Close]

BLAST of CmoCh17G000310 vs. NCBI nr
Match: gi|1009168699|ref|XP_015902801.1| (PREDICTED: LOB domain-containing protein 18-like [Ziziphus jujuba])

HSP 1 Score: 340.5 bits (872), Expect = 2.3e-90
Identity = 188/246 (76.42%), Postives = 203/246 (82.52%), Query Frame = 1


Query: 1   MSANPSTSGGGGG-------GGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHF 60
           MSANPS+SGGGG        GGG GGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HF
Sbjct: 1   MSANPSSSGGGGSSSGSGGCGGGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF 60

Query: 61  AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSL 120
           AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QVV+L
Sbjct: 61  AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 120

Query: 121 QAELSYLQAHLATLELPSPPPPP---NFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQ 180
           QAELSYLQAHLATLELPSPPPPP        PP++I+DLPSASS+P TYDLSSLF+PM Q
Sbjct: 121 QAELSYLQAHLATLELPSPPPPPPPTTLVTPPPLTIADLPSASSVPTTYDLSSLFEPMVQ 180

Query: 181 PAWAMQQQRLDHRQF-SSGGAGGSSTTAGEGDLQALARALLHRHGGPP-----CSDA-SS 230
           P W MQQ+ +D RQF SS G+   +  +G GDL ALAR LLHRHG PP     C DA SS
Sbjct: 181 P-WVMQQRPMDPRQFGSSTGSSSGTGGSGGGDLHALARELLHRHGSPPHGSMTCPDASSS 240

[Close]

BLAST of CmoCh17G000310 vs. NCBI nr
Match: gi|224127394|ref|XP_002320063.1| (LOB domain protein 18 [Populus trichocarpa])

HSP 1 Score: 339.3 bits (869), Expect = 5.1e-90
Identity = 184/233 (78.97%), Postives = 199/233 (85.41%), Query Frame = 1


Query: 6   STSGGGGGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFAAVHKVFGASNV 65
           S+ GGGGGGGGGGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFAAVHKVFGASNV
Sbjct: 17  SSGGGGGGGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNV 76

Query: 66  SKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQAELSYLQAHLA 125
           SKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QVV+LQAELSYLQAHLA
Sbjct: 77  SKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHLA 136

Query: 126 TLELPS--PPPPPNFAVQPPVSISDLPSASSLPVTYDLSSLFDPMAQPAWA-MQQQR-LD 185
            LE+PS  PPPPP     PP+SI+DLPSASS+P  YDLS LFDPM QP+W+ MQ QR +D
Sbjct: 137 ALEVPSPPPPPPPTLVTPPPLSIADLPSASSIPAAYDLSCLFDPMMQPSWSNMQPQRQMD 196

Query: 186 HRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGPP-----CSDASSPPSLSK 230
            RQF  GG+GGSS T G GDLQALAR LLHR G PP     CSD  + PS+SK
Sbjct: 197 IRQF--GGSGGSSGTGG-GDLQALARELLHRRGSPPPGFMSCSDTLASPSISK 246

[Close]

BLAST of CmoCh17G000310 vs. NCBI nr
Match: gi|728833682|gb|KHG13125.1| (LOB domain-containing 18 -like protein [Gossypium arboreum])

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89
Identity = 188/248 (75.81%), Postives = 205/248 (82.66%), Query Frame = 1


Query: 1   MSANPSTSGG--GGG----------GGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQ 60
           MS+NPS SGG  GGG          GGGGGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQ
Sbjct: 1   MSSNPSNSGGSVGGGSGSCSGSAAAGGGGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAGHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQR 120
           GA HFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTIC+E+QARLRDPVYGCVAHIFALQ+
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICFEAQARLRDPVYGCVAHIFALQQ 120

Query: 121 QVVSLQAELSYLQAHLATLELPSPPPPP-----NFAVQPPVSISDLPSASSLPVTYDLSS 180
           QVV+LQAELSYLQAHL TLELPSPPPPP          PP+SISDLPSASS+P TYDLSS
Sbjct: 121 QVVNLQAELSYLQAHLTTLELPSPPPPPPPPSQTLVAAPPLSISDLPSASSVPATYDLSS 180

Query: 181 LFDPM-AQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGP--PCSD 229
           LFDPM AQ +WAMQQ+++D RQ+  GG G +S+T G GDLQALAR LLHR G P  PC+D
Sbjct: 181 LFDPMVAQTSWAMQQRQIDPRQY--GGTGSASST-GSGDLQALARELLHRQGSPHLPCTD 240

The following BLAST results are available for this feature:

BLAST of CmoCh17G000310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LBD18_ARATH	4.8e-72	65.67	LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2	[more]
LBD30_ARATH	6.9e-63	65.07	LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1	[more]
LBD19_ARATH	1.6e-43	50.74	LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1	[more]
LBD31_ARATH	3.0e-42	49.52	LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2	[more]
LBD29_ARATH	4.1e-39	70.48	LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1	[more]

BLAST of CmoCh17G000310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEN5_CUCSA	3.9e-105	85.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076840 PE=4 SV=1	[more]
W9QS27_9ROSA	3.1e-94	80.00	Uncharacterized protein OS=Morus notabilis GN=L484_022439 PE=4 SV=1	[more]
B9IC05_POPTR	3.5e-90	78.97	LOB domain protein 18 OS=Populus trichocarpa GN=POPTR_0014s06600g PE=4 SV=1	[more]
A0A0B0NJT7_GOSAR	7.9e-90	75.81	LOB domain-containing 18-like protein OS=Gossypium arboreum GN=F383_20283 PE=4 S...	[more]
A0A059C3F2_EUCGR	1.8e-89	76.23	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01414 PE=4 SV=1	[more]

BLAST of CmoCh17G000310 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45420.1	2.7e-73	65.67	LOB domain-containing protein 18	[more]
AT4G00220.1	3.9e-64	65.07	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45410.1	9.0e-45	50.74	LOB domain-containing protein 19	[more]
AT4G00210.1	1.7e-43	49.52	LOB domain-containing protein 31	[more]
AT3G58190.1	2.3e-40	70.48	lateral organ boundaries-domain 29	[more]

BLAST of CmoCh17G000310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454632\|ref\|XP_004145058.1\|	5.6e-105	85.89	PREDICTED: LOB domain-containing protein 18-like [Cucumis sativus]	[more]
gi\|703085826\|ref\|XP_010092844.1\|	4.4e-94	80.00	hypothetical protein L484_022439 [Morus notabilis]	[more]
gi\|1009168699\|ref\|XP_015902801.1\|	2.3e-90	76.42	PREDICTED: LOB domain-containing protein 18-like [Ziziphus jujuba]	[more]
gi\|224127394\|ref\|XP_002320063.1\|	5.1e-90	78.97	LOB domain protein 18 [Populus trichocarpa]	[more]
gi\|728833682\|gb\|KHG13125.1\|	1.1e-89	75.81	LOB domain-containing 18 -like protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048468	cell development
biological_process	GO:0010015	root morphogenesis
biological_process	GO:0048765	root hair cell differentiation
biological_process	GO:0071555	cell wall organization
biological_process	GO:0044036	cell wall macromolecule metabolic process
biological_process	GO:0007155	cell adhesion
biological_process	GO:0045010	actin nucleation
biological_process	GO:0008150	biological_process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0010089	xylem development
biological_process	GO:0090558	plant epidermis development
biological_process	GO:0010311	lateral root formation
biological_process	GO:0071554	cell wall organization or biogenesis
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G000310.1	CmoCh17G000310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	DUF260	coord: 23..121 score: 2.7
IPR004883	Lateral organ boundaries, LOB	PROFILE	PS50891	LOB	coord: 22..124 score: 22
None	No IPR available	PANTHER	PTHR31529	FAMILY NOT NAMED	coord: 1..220 score: 8.3E
None	No IPR available	PANTHER	PTHR31529:SF3	LOB DOMAIN-CONTAINING PROTEIN 18-RELATED	coord: 1..220 score: 8.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G000310	Cucsa.362830	Cucumber (Gy14) v1	cgycmoB0999
CmoCh17G000310	CmaCh14G019810	Cucurbita maxima (Rimu)	cmacmoB251
CmoCh17G000310	CmaCh17G000280	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G000310	CmaCh08G009530	Cucurbita maxima (Rimu)	cmacmoB887
CmoCh17G000310	Cla006955	Watermelon (97103) v1	cmowmB348
CmoCh17G000310	Cla021305	Watermelon (97103) v1	cmowmB340
CmoCh17G000310	Csa3G126090	Cucumber (Chinese Long) v2	cmocuB348
CmoCh17G000310	Csa6G076840	Cucumber (Chinese Long) v2	cmocuB359
CmoCh17G000310	MELO3C022505	Melon (DHL92) v3.5.1	cmomeB309
CmoCh17G000310	MELO3C006183	Melon (DHL92) v3.5.1	cmomeB336
CmoCh17G000310	ClCG05G002190	Watermelon (Charleston Gray)	cmowcgB315
CmoCh17G000310	ClCG06G000340	Watermelon (Charleston Gray)	cmowcgB319
CmoCh17G000310	CSPI03G09510	Wild cucumber (PI 183967)	cmocpiB353
CmoCh17G000310	CSPI06G05820	Wild cucumber (PI 183967)	cmocpiB362
CmoCh17G000310	Lsi09G019000	Bottle gourd (USVL1VR-Ls)	cmolsiB323
CmoCh17G000310	Cp4.1LG12g00260	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G000310	Cp4.1LG17g02570	Cucurbita pepo (Zucchini)	cmocpeB357
CmoCh17G000310	Cp4.1LG03g17200	Cucurbita pepo (Zucchini)	cmocpeB364
CmoCh17G000310	MELO3C022505.2	Melon (DHL92) v3.6.1	cmomedB354
CmoCh17G000310	CsaV3_6G006130	Cucumber (Chinese Long) v3	cmocucB0434
CmoCh17G000310	CsaV3_3G009630	Cucumber (Chinese Long) v3	cmocucB0420
CmoCh17G000310	Cla97C05G082710	Watermelon (97103) v2	cmowmbB350
CmoCh17G000310	Cla97C06G109600	Watermelon (97103) v2	cmowmbB355
CmoCh17G000310	Bhi12G002303	Wax gourd	cmowgoB0459
CmoCh17G000310	CsGy6G005800	Cucumber (Gy14) v2	cgybcmoB735
CmoCh17G000310	CsGy3G009580	Cucumber (Gy14) v2	cgybcmoB317
CmoCh17G000310	Carg11089	Silver-seed gourd	carcmoB1448
CmoCh17G000310	Carg14831	Silver-seed gourd	carcmoB0851
CmoCh17G000310	Carg10203	Silver-seed gourd	carcmoB0320

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G000310	CmoCh14G020430	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh17G000310	CmoCh08G009210	Cucurbita moschata (Rifu)	cmocmoB314

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G000310	Bottle gourd (USVL1VR-Ls)	cmolsiB345
CmoCh17G000310	Melon (DHL92) v3.6.1	cmomedB385
CmoCh17G000310	Wax gourd	cmowgoB0463
CmoCh17G000310	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh17G000310	Cucurbita maxima (Rimu)	cmacmoB811