CmoCh08G009210 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G009210
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLOB domain-containing protein, putative
LocationCmo_Chr08 : 6007802 .. 6009961 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGTAGGTCTGGGGAGTGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCCCATATCTTTGCCCTTCAACAACAGGTAAGTAAATACTACCCTACTCTACCCTTCAATCGGTAAAGGATAAAGCTACTTAATTCTACTACCCTCCCACTTTAATTTATTATTATATTATTACCAAATCATTTCCCCGGCGGTTACCACGGTAATATACCATAATTAAATTCCTTTTTTTCTTTTTCCTTTTCTTTTTCTTTTTTCAAATAAACATTTTCTGGGTATTTATTTATTTCTTATTTGCAGTTATTAAGGAGCTGGTCGGGCTATTGCCTTAAACTTAAGCTTTTCATTACAAACAACACTCATTTCCTACGTTTCCCCCAATATTCAGCTTCCTGTCAGTGTATCTTCTAAACCAAATCATAATTTTTTTTTAAAATAATATTCTCTACAATTTTAATTCTTATAAGTTTTGGTCAAAATTAGAATTTTATAATGAATTAAATGATTTTTTGGAAACTTTTTTTAAGTAAAAGAAAATGTTTTCCCTTTTATTGTTTTTTTTTTATATAAAAAAAATTAAAAACCAAAAATAGTTTTTATATAGTTTGGATTATTTAATATATTTCTTTTTTTAAATCTATGTATGTATACTGCATATATAGCAATACCTACTACGTAAGTATCTTTGTACTATTATCAGTATGGTTGGTAAATATTTGTTTGAGATGAAATAAAATTAATTTTAATACTTTATAATTTCCATTTTTTAAAATTATTTGCTAATTTTACTTATATTTGTTTCTAAAAATAAAAAAGAACCTTGGCGTTAAACAAGCCCTAAGGGTATTTTTATATATTTTAAAAGAATTCTAGTAAAATAGAAAAAGCTAAAACTAGTTCAATTTCCACTTTAATTTTGTTTGTTTTATTATTTATTATTTCTTTTTCCTTTTATTCTTATTTTTAGTTGAGTGTAATCTACTCTCAATAATTTATTTCATCTTAAAACTCTCTCTCTCTCTATATATTATATATTAATTAGTTGAATTTTTTAATTTTATTTTTTAGGGAAATATGCAATAAGAATTAAACAAAAAATTAGAGTCAAGCCTAATAAATTTTTTTATTTTGAATACAGTAAAAAATACTAAATGAGTGATATGTATTTCTTTACTTGAATTATGAAATTTAAAAACATTATGATTAAGATTTATATGTTAGTTATGTATTTTAAAATTTATTTATTTTTGTCGTGTAGTTAAATTAGTTTATTTTAAATTTATTTTAGTTTTTATTTTTTTTTTTTAACTTTTGATCTATTTTTGTACTTTCATATTAATTTATGTGAAAATAATAGTAAACATAATAAAATTTAAATGTTTATAATGTTAATATGTAAATTAAAAACTTTGCAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCCGTCTCTAAATAAAATCAAAACCCTTCATTTTCTTTGAATTTCTTGCCTCTTTGATTTCACTTTTGTCAAAAATTGAAGGGTTCCTGAG

mRNA sequence

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGTAGGTCTGGGGAGTGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCCCATATCTTTGCCCTTCAACAACAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCCGTCTCTAAATAAAATCAAAACCCTTCATTTTCTTTGAATTTCTTGCCTCTTTGATTTCACTTTTGTCAAAAATTGAAGGGTTCCTGAG

Coding sequence (CDS)

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGTAGGTCTGGGGAGTGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCCCATATCTTTGCCCTTCAACAACAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCCGTCTCTAAATAA
Homology
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BLAST of CmoCh08G009210 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-72
Identity = 165/245 (67.35%), Postives = 187/245 (76.33%), Query Frame = 1 

Query: 9   GGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVF 68
           GGG GGGG   G GS  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A+FAAVHKVF
Sbjct: 15  GGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVF 74

Query: 69  GASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYL 128
           GASNVSKLLLHIP+H+R DAVVTICYEAQAR+RDP+YGCV+HIFALQQQVV+LQAE+SYL
Sbjct: 75  GASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYL 134

Query: 129 QAQLASLELPSP---PNPPPPPPPPSFQGVPPLSISDLPSPPS-LPATYDLSSLFDPM-A 188
           QA LASLELP P   P P P P P  F   PPL+I+DLP+  S LP+TYDL+S+FD   +
Sbjct: 135 QAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQTTS 194

Query: 189 QPAWVLPQQR-LDPRQFTGGGGGSGGSSGLSTVAGEG--DLQALARELLHRHGAPPSSDS 246
             AW   Q+R +DPR   G    S  SS    + GE   DLQALA ELLHR G+PP + +
Sbjct: 195 SSAWATQQRRFIDPRHQYGVSSSS--SSVAVGLGGENSHDLQALAHELLHRQGSPPPAAT 254

[Close]
BLAST of CmoCh08G009210 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.5e-63
Identity = 144/225 (64.00%), Postives = 163/225 (72.44%), Query Frame = 1 

Query: 23  SGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPI 82
           S SGGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL H+P 
Sbjct: 9   SSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPE 68

Query: 83  HKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPN 142
           HKRPDAVV+IC+EAQARLRDP+YGCVSHI +LQQQVVSLQ ELSYLQA LA+LELP P  
Sbjct: 69  HKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELPQP-- 128

Query: 143 PPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGG 202
            PP  P  S   +  LSI+DLP+    P+ YDLSS+F+P+    W + QQ   PR     
Sbjct: 129 QPPQVPVSSSGSLQALSITDLPT--ISPSVYDLSSIFEPVMSSTWAMQQQ---PRP---- 188

Query: 203 GGGSGGSSGLSTVAGEGDLQALARELLH--RHGAPPSSDSSSPPS 246
                G    S + G G+LQALARE +H  +  A PS  +S   S
Sbjct: 189 SDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTSGSAS 222

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BLAST of CmoCh08G009210 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 8.0e-41
Identity = 90/145 (62.07%), Postives = 112/145 (77.24%), Query Frame = 1 

Query: 24  GSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPIH 83
           G  GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+LL +P+H
Sbjct: 9   GGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPLH 68

Query: 84  KRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLE---LPSP 143
           KR DAVVT+CYEA AR+RDPVYG V H+F+LQ QV++LQAEL+++QA+L++++   L SP
Sbjct: 69  KRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPLQSP 128

Query: 144 PNPPPPPPPPSFQGVPPLSISDLPS 166
               PP   P+      +  S+L S
Sbjct: 129 QQMQPPSFDPAHNNEYAMEPSNLDS 153

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BLAST of CmoCh08G009210 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-40
Identity = 85/114 (74.56%), Postives = 97/114 (85.09%), Query Frame = 1 

Query: 21  SGSGSGGG-GGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLH 80
           SG+G+  G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 81  IPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLA 134
           +PIH R +AVVTI YEAQARL DPVYGCVSHIFALQQQV  LQ+++  ++AQ+A
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]
BLAST of CmoCh08G009210 vs. Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.2e-40
Identity = 88/118 (74.58%), Postives = 98/118 (83.05%), Query Frame = 1 

Query: 15  GGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 74
           GGV + + +   G   PCGACKFLRRKCV GCIFAP+F S+QGAA FAAVHKVFGASNVS
Sbjct: 35  GGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVS 94

Query: 75  KLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQL 133
           KLL HIP+++R DAVVTI YEAQARL DPVYGCVS I ALQQQV SLQAELS +Q+QL
Sbjct: 95  KLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSVVQSQL 152

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BLAST of CmoCh08G009210 vs. TrEMBL
Match: A0A0A0KEN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076840 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.7e-101
Identity = 208/248 (83.87%), Postives = 215/248 (86.69%), Query Frame = 1 

Query: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSANPSTSGGG  G G     GS   GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH
Sbjct: 1   MSANPSTSGGG--GPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVS 120
           FAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVVS
Sbjct: 61  FAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVS 120

Query: 121 LQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFD 180
           LQAEL+YLQA LA+LELPSPPNPPPPPPPPSF   PPLSISDLPS  SLPATYDLSSLFD
Sbjct: 121 LQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFD 180

Query: 181 PMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSDS 240
           PMAQPAW + QQRLD RQF GGGGGS      ST  GEGDLQALARELL RHGAPP SD+
Sbjct: 181 PMAQPAWAMQQQRLDHRQFAGGGGGS------STAPGEGDLQALARELLLRHGAPPCSDA 240

Query: 241 SSPPSVSK 249
           SSP S+SK
Sbjct: 241 SSPQSLSK 240

[Close]
BLAST of CmoCh08G009210 vs. TrEMBL
Match: W9QS27_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022439 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.2e-87
Identity = 191/251 (76.10%), Postives = 206/251 (82.07%), Query Frame = 1 

Query: 4   NPST-SGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 63
           NPS+ SGGG GGGGV         GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 6   NPSSSSGGGGGGGGV---------GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 65

Query: 64  AVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQ 123
           AVHKVFGASNVSKLLLHIP+HKR DAVVT+CYEAQARLRDPVYGCV+HIFALQQQVVSLQ
Sbjct: 66  AVHKVFGASNVSKLLLHIPVHKRLDAVVTVCYEAQARLRDPVYGCVAHIFALQQQVVSLQ 125

Query: 124 AELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPM 183
            ELSYLQA LA+LELPSP  PP PPPPPS    PPLSI+DLPS  S+PATYDLSSLF+P+
Sbjct: 126 TELSYLQAHLATLELPSP--PPAPPPPPSSLNPPPLSIADLPSASSVPATYDLSSLFEPI 185

Query: 184 AQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP-----PS 243
            QP W + Q++LDPRQF    GGS GSS  ST  G GDLQALARELLHRHG+P     P 
Sbjct: 186 VQP-WSMQQRQLDPRQF----GGSTGSS--STSGGGGDLQALARELLHRHGSPPHGPVPC 238

Query: 244 SDSSSPPSVSK 249
           SD+S  PS+SK
Sbjct: 246 SDASQSPSLSK 238

[Close]
BLAST of CmoCh08G009210 vs. TrEMBL
Match: A0A067KAC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.7e-86
Identity = 186/252 (73.81%), Postives = 207/252 (82.14%), Query Frame = 1 

Query: 2   SANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF 61
           +ANPS+SGG  GGGG     GS S GG GPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF
Sbjct: 4   TANPSSSGGSGGGGG-----GSSSSGGSGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF 63

Query: 62  AAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSL 121
           AAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVV+L
Sbjct: 64  AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 123

Query: 122 QAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDP 181
           QAEL+YLQA LA+LE+PSP  PPPPPPPP+     PLSISDLPS  S+PATYDLSSLFDP
Sbjct: 124 QAELTYLQAHLATLEVPSP--PPPPPPPPALVTPLPLSISDLPSASSMPATYDLSSLFDP 183

Query: 182 MAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP-----P 241
           + QP+W + Q+++DPRQF    GGS  SS    ++G GDLQ+LARELL RHG+P     P
Sbjct: 184 ITQPSWTMQQRQMDPRQF----GGSSTSSS-PAISGGGDLQSLARELLLRHGSPQRGSMP 243

Query: 242 SSDSSSPPSVSK 249
            S S S PS+SK
Sbjct: 244 CSGSLSSPSISK 243

[Close]
BLAST of CmoCh08G009210 vs. TrEMBL
Match: F6I373_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00830 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.3e-85
Identity = 194/258 (75.19%), Postives = 208/258 (80.62%), Query Frame = 1 

Query: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSAN S+SGGG GGGG G  S SG GGGGGPCGACKFLRRKCV GCIFAPYFD EQGAAH
Sbjct: 1   MSANTSSSGGGGGGGGGG--STSGGGGGGGPCGACKFLRRKCVVGCIFAPYFDPEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVS 120
           FAAVHKVFGASNVSKLL HIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVV+
Sbjct: 61  FAAVHKVFGASNVSKLLGHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVN 120

Query: 121 LQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFD 180
           LQAELSYLQA LA+LELPSPP PPPPPPPP     P LSISDLPS  S+P TYDLSSLFD
Sbjct: 121 LQAELSYLQAHLATLELPSPP-PPPPPPPPVMVTPPSLSISDLPSASSMPPTYDLSSLFD 180

Query: 181 PMAQP-AWVLPQQR-LDPRQFTGGGGGSGGSSGLSTVA---GEGDLQALARELLHRH--- 240
           PM QP +W + Q R +DPRQF    GGS G + L + A   G GDLQALARELLHRH   
Sbjct: 181 PMVQPSSWPMQQHRQIDPRQF----GGSRGPTDLPSTAGGSGGGDLQALARELLHRHSSA 240

Query: 241 --GAPPSSDSSSPPSVSK 249
             G  P ++SS PPS+SK
Sbjct: 241 LGGHVPCTESSMPPSISK 251

[Close]
BLAST of CmoCh08G009210 vs. TrEMBL
Match: A0A059C3F2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01414 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-85
Identity = 190/253 (75.10%), Postives = 208/253 (82.21%), Query Frame = 1 

Query: 1   MSANPSTSGGGSGGGG-VGLGSGSGSGGG-GGPCGACKFLRRKCVPGCIFAPYFDSEQGA 60
           MS+NPS+SGGG GGGG  G G GSGSG G GGPCGACKFLRRKCVPGCIFAPYFDSEQGA
Sbjct: 1   MSSNPSSSGGGGGGGGGSGSGGGSGSGSGSGGPCGACKFLRRKCVPGCIFAPYFDSEQGA 60

Query: 61  AHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQV 120
           AHFAAVHKVFGASNVSKLLLHIP+H+R DAVVTICYEAQARLRDPVYGCV+HIFALQQQV
Sbjct: 61  AHFAAVHKVFGASNVSKLLLHIPVHRRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQV 120

Query: 121 VSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSL 180
           V+LQAELSYLQA L +LELP P   PPPPPPP+    P LSI+DLPS  S+PATYDLSSL
Sbjct: 121 VNLQAELSYLQAHLTTLELPVP--LPPPPPPPAMG--PQLSIADLPSASSIPATYDLSSL 180

Query: 181 FDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPS- 240
           FDPMAQ AW++PQ+++D RQF G  GG G     S+ AG GDL ALARELL R G+PP  
Sbjct: 181 FDPMAQAAWMVPQRQIDFRQFEGSCGGGG-----SSAAGGGDLNALARELLRRQGSPPPG 240

Query: 241 --SDSSSPPSVSK 249
                SSP S+SK
Sbjct: 241 CIDAMSSPSSLSK 244

[Close]
BLAST of CmoCh08G009210 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 274.2 bits (700), Expect = 7.6e-74
Identity = 165/245 (67.35%), Postives = 187/245 (76.33%), Query Frame = 1 

Query: 9   GGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVF 68
           GGG GGGG   G GS  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A+FAAVHKVF
Sbjct: 15  GGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVF 74

Query: 69  GASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYL 128
           GASNVSKLLLHIP+H+R DAVVTICYEAQAR+RDP+YGCV+HIFALQQQVV+LQAE+SYL
Sbjct: 75  GASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYL 134

Query: 129 QAQLASLELPSP---PNPPPPPPPPSFQGVPPLSISDLPSPPS-LPATYDLSSLFDPM-A 188
           QA LASLELP P   P P P P P  F   PPL+I+DLP+  S LP+TYDL+S+FD   +
Sbjct: 135 QAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQTTS 194

Query: 189 QPAWVLPQQR-LDPRQFTGGGGGSGGSSGLSTVAGEG--DLQALARELLHRHGAPPSSDS 246
             AW   Q+R +DPR   G    S  SS    + GE   DLQALA ELLHR G+PP + +
Sbjct: 195 SSAWATQQRRFIDPRHQYGVSSSS--SSVAVGLGGENSHDLQALAHELLHRQGSPPPAAT 254

[Close]
BLAST of CmoCh08G009210 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-64
Identity = 144/225 (64.00%), Postives = 163/225 (72.44%), Query Frame = 1 

Query: 23  SGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPI 82
           S SGGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL H+P 
Sbjct: 9   SSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPE 68

Query: 83  HKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPN 142
           HKRPDAVV+IC+EAQARLRDP+YGCVSHI +LQQQVVSLQ ELSYLQA LA+LELP P  
Sbjct: 69  HKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELPQP-- 128

Query: 143 PPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGG 202
            PP  P  S   +  LSI+DLP+    P+ YDLSS+F+P+    W + QQ   PR     
Sbjct: 129 QPPQVPVSSSGSLQALSITDLPT--ISPSVYDLSSIFEPVMSSTWAMQQQ---PRP---- 188

Query: 203 GGGSGGSSGLSTVAGEGDLQALARELLH--RHGAPPSSDSSSPPS 246
                G    S + G G+LQALARE +H  +  A PS  +S   S
Sbjct: 189 SDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTSGSAS 222

[Close]
BLAST of CmoCh08G009210 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19)

HSP 1 Score: 168.7 bits (426), Expect = 4.5e-42
Identity = 90/145 (62.07%), Postives = 112/145 (77.24%), Query Frame = 1 

Query: 24  GSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPIH 83
           G  GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+LL +P+H
Sbjct: 9   GGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPLH 68

Query: 84  KRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLE---LPSP 143
           KR DAVVT+CYEA AR+RDPVYG V H+F+LQ QV++LQAEL+++QA+L++++   L SP
Sbjct: 69  KRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPLQSP 128

Query: 144 PNPPPPPPPPSFQGVPPLSISDLPS 166
               PP   P+      +  S+L S
Sbjct: 129 QQMQPPSFDPAHNNEYAMEPSNLDS 153

[Close]
BLAST of CmoCh08G009210 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 85/114 (74.56%), Postives = 97/114 (85.09%), Query Frame = 1 

Query: 21  SGSGSGGG-GGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLH 80
           SG+G+  G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 81  IPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLA 134
           +PIH R +AVVTI YEAQARL DPVYGCVSHIFALQQQV  LQ+++  ++AQ+A
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]
BLAST of CmoCh08G009210 vs. TAIR10
Match: AT3G03760.1 (AT3G03760.1 LOB domain-containing protein 20)

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-41
Identity = 88/118 (74.58%), Postives = 98/118 (83.05%), Query Frame = 1 

Query: 15  GGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 74
           GGV + + +   G   PCGACKFLRRKCV GCIFAP+F S+QGAA FAAVHKVFGASNVS
Sbjct: 35  GGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVS 94

Query: 75  KLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQL 133
           KLL HIP+++R DAVVTI YEAQARL DPVYGCVS I ALQQQV SLQAELS +Q+QL
Sbjct: 95  KLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSVVQSQL 152

[Close]
BLAST of CmoCh08G009210 vs. NCBI nr
Match: gi|449454632|ref|XP_004145058.1| (PREDICTED: LOB domain-containing protein 18-like [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 2.4e-101
Identity = 208/248 (83.87%), Postives = 215/248 (86.69%), Query Frame = 1 

Query: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSANPSTSGGG  G G     GS   GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH
Sbjct: 1   MSANPSTSGGG--GPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVS 120
           FAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVVS
Sbjct: 61  FAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVS 120

Query: 121 LQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFD 180
           LQAEL+YLQA LA+LELPSPPNPPPPPPPPSF   PPLSISDLPS  SLPATYDLSSLFD
Sbjct: 121 LQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFD 180

Query: 181 PMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSDS 240
           PMAQPAW + QQRLD RQF GGGGGS      ST  GEGDLQALARELL RHGAPP SD+
Sbjct: 181 PMAQPAWAMQQQRLDHRQFAGGGGGS------STAPGEGDLQALARELLLRHGAPPCSDA 240

Query: 241 SSPPSVSK 249
           SSP S+SK
Sbjct: 241 SSPQSLSK 240

[Close]
BLAST of CmoCh08G009210 vs. NCBI nr
Match: gi|703085826|ref|XP_010092844.1| (hypothetical protein L484_022439 [Morus notabilis])

HSP 1 Score: 328.9 bits (842), Expect = 7.4e-87
Identity = 191/251 (76.10%), Postives = 206/251 (82.07%), Query Frame = 1 

Query: 4   NPST-SGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 63
           NPS+ SGGG GGGGV         GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 6   NPSSSSGGGGGGGGV---------GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 65

Query: 64  AVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQ 123
           AVHKVFGASNVSKLLLHIP+HKR DAVVT+CYEAQARLRDPVYGCV+HIFALQQQVVSLQ
Sbjct: 66  AVHKVFGASNVSKLLLHIPVHKRLDAVVTVCYEAQARLRDPVYGCVAHIFALQQQVVSLQ 125

Query: 124 AELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPM 183
            ELSYLQA LA+LELPSP  PP PPPPPS    PPLSI+DLPS  S+PATYDLSSLF+P+
Sbjct: 126 TELSYLQAHLATLELPSP--PPAPPPPPSSLNPPPLSIADLPSASSVPATYDLSSLFEPI 185

Query: 184 AQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP-----PS 243
            QP W + Q++LDPRQF    GGS GSS  ST  G GDLQALARELLHRHG+P     P 
Sbjct: 186 VQP-WSMQQRQLDPRQF----GGSTGSS--STSGGGGDLQALARELLHRHGSPPHGPVPC 238

Query: 244 SDSSSPPSVSK 249
           SD+S  PS+SK
Sbjct: 246 SDASQSPSLSK 238

[Close]
BLAST of CmoCh08G009210 vs. NCBI nr
Match: gi|1009168699|ref|XP_015902801.1| (PREDICTED: LOB domain-containing protein 18-like [Ziziphus jujuba])

HSP 1 Score: 328.9 bits (842), Expect = 7.4e-87
Identity = 189/254 (74.41%), Postives = 206/254 (81.10%), Query Frame = 1 

Query: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSANPS+SGGG    G G G G GSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH
Sbjct: 1   MSANPSSSGGGGSSSGSG-GCGGGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVS 120
           FAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVV+
Sbjct: 61  FAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVN 120

Query: 121 LQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFD 180
           LQAELSYLQA LA+LELPSPP   PPPPP +    PPL+I+DLPS  S+P TYDLSSLF+
Sbjct: 121 LQAELSYLQAHLATLELPSPP---PPPPPTTLVTPPPLTIADLPSASSVPTTYDLSSLFE 180

Query: 181 PMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSD- 240
           PM QP WV+ Q+ +DPRQF    G S G+ G    +G GDL ALARELLHRHG+PP    
Sbjct: 181 PMVQP-WVMQQRPMDPRQFGSSTGSSSGTGG----SGGGDLHALARELLHRHGSPPHGSM 240

Query: 241 -----SSSPPSVSK 249
                SSSP S+SK
Sbjct: 241 TCPDASSSPSSLSK 245

[Close]
BLAST of CmoCh08G009210 vs. NCBI nr
Match: gi|802699504|ref|XP_012083561.1| (PREDICTED: LOB domain-containing protein 18 [Jatropha curcas])

HSP 1 Score: 325.5 bits (833), Expect = 8.2e-86
Identity = 186/252 (73.81%), Postives = 207/252 (82.14%), Query Frame = 1 

Query: 2   SANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF 61
           +ANPS+SGG  GGGG     GS S GG GPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF
Sbjct: 4   TANPSSSGGSGGGGG-----GSSSSGGSGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHF 63

Query: 62  AAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSL 121
           AAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVV+L
Sbjct: 64  AAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNL 123

Query: 122 QAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDP 181
           QAEL+YLQA LA+LE+PSP  PPPPPPPP+     PLSISDLPS  S+PATYDLSSLFDP
Sbjct: 124 QAELTYLQAHLATLEVPSP--PPPPPPPPALVTPLPLSISDLPSASSMPATYDLSSLFDP 183

Query: 182 MAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP-----P 241
           + QP+W + Q+++DPRQF    GGS  SS    ++G GDLQ+LARELL RHG+P     P
Sbjct: 184 ITQPSWTMQQRQMDPRQF----GGSSTSSS-PAISGGGDLQSLARELLLRHGSPQRGSMP 243

Query: 242 SSDSSSPPSVSK 249
            S S S PS+SK
Sbjct: 244 CSGSLSSPSISK 243

[Close]
BLAST of CmoCh08G009210 vs. NCBI nr
Match: gi|225453923|ref|XP_002279521.1| (PREDICTED: LOB domain-containing protein 18 [Vitis vinifera])

HSP 1 Score: 324.3 bits (830), Expect = 1.8e-85
Identity = 194/258 (75.19%), Postives = 208/258 (80.62%), Query Frame = 1 

Query: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSAN S+SGGG GGGG G  S SG GGGGGPCGACKFLRRKCV GCIFAPYFD EQGAAH
Sbjct: 1   MSANTSSSGGGGGGGGGG--STSGGGGGGGPCGACKFLRRKCVVGCIFAPYFDPEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVS 120
           FAAVHKVFGASNVSKLL HIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVV+
Sbjct: 61  FAAVHKVFGASNVSKLLGHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVN 120

Query: 121 LQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFD 180
           LQAELSYLQA LA+LELPSPP PPPPPPPP     P LSISDLPS  S+P TYDLSSLFD
Sbjct: 121 LQAELSYLQAHLATLELPSPP-PPPPPPPPVMVTPPSLSISDLPSASSMPPTYDLSSLFD 180

Query: 181 PMAQP-AWVLPQQR-LDPRQFTGGGGGSGGSSGLSTVA---GEGDLQALARELLHRH--- 240
           PM QP +W + Q R +DPRQF    GGS G + L + A   G GDLQALARELLHRH   
Sbjct: 181 PMVQPSSWPMQQHRQIDPRQF----GGSRGPTDLPSTAGGSGGGDLQALARELLHRHSSA 240

Query: 241 --GAPPSSDSSSPPSVSK 249
             G  P ++SS PPS+SK
Sbjct: 241 LGGHVPCTESSMPPSISK 251

The following BLAST results are available for this feature:
BLAST of CmoCh08G009210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD18_ARATH1.4e-7267.35LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD30_ARATH7.5e-6364.00LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD19_ARATH8.0e-4162.07LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1[more]
LBD16_ARATH2.3e-4074.56LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
LBD20_ARATH5.2e-4074.58LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1[more]
BLAST of CmoCh08G009210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEN5_CUCSA1.7e-10183.87Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076840 PE=4 SV=1[more]
W9QS27_9ROSA5.2e-8776.10Uncharacterized protein OS=Morus notabilis GN=L484_022439 PE=4 SV=1[more]
A0A067KAC7_JATCU5.7e-8673.81Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1[more]
F6I373_VITVI1.3e-8575.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00830 PE=4 SV=... [more]
A0A059C3F2_EUCGR2.2e-8575.10Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01414 PE=4 SV=1[more]
BLAST of CmoCh08G009210 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45420.17.6e-7467.35 LOB domain-containing protein 18[more]
AT4G00220.14.2e-6464.00 Lateral organ boundaries (LOB) domain family protein[more]
AT2G45410.14.5e-4262.07 LOB domain-containing protein 19[more]
AT2G42430.11.3e-4174.56 lateral organ boundaries-domain 16[more]
AT3G03760.12.9e-4174.58 LOB domain-containing protein 20[more]
BLAST of CmoCh08G009210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454632|ref|XP_004145058.1|2.4e-10183.87PREDICTED: LOB domain-containing protein 18-like [Cucumis sativus][more]
gi|703085826|ref|XP_010092844.1|7.4e-8776.10hypothetical protein L484_022439 [Morus notabilis][more]
gi|1009168699|ref|XP_015902801.1|7.4e-8774.41PREDICTED: LOB domain-containing protein 18-like [Ziziphus jujuba][more]
gi|802699504|ref|XP_012083561.1|8.2e-8673.81PREDICTED: LOB domain-containing protein 18 [Jatropha curcas][more]
gi|225453923|ref|XP_002279521.1|1.8e-8575.19PREDICTED: LOB domain-containing protein 18 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045010 actin nucleation
biological_process GO:0007155 cell adhesion
biological_process GO:0090558 plant epidermis development
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0048468 cell development
biological_process GO:0008150 biological_process
biological_process GO:0010015 root morphogenesis
biological_process GO:0010089 xylem development
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010311 lateral root formation
biological_process GO:0071555 cell wall organization
biological_process GO:0044036 cell wall macromolecule metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G009210.1CmoCh08G009210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 31..129
score: 4.7
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 30..132
score: 2
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 4..239
score: 6.3E
NoneNo IPR availablePANTHERPTHR31529:SF3LOB DOMAIN-CONTAINING PROTEIN 18-RELATEDcoord: 4..239
score: 6.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G009210Cucsa.362830Cucumber (Gy14) v1cgycmoB1013
CmoCh08G009210CmaCh14G019810Cucurbita maxima (Rimu)cmacmoB281
CmoCh08G009210CmaCh17G000280Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G009210CmaCh08G009530Cucurbita maxima (Rimu)cmacmoB912
CmoCh08G009210Cla006955Watermelon (97103) v1cmowmB862
CmoCh08G009210Cla021305Watermelon (97103) v1cmowmB857
CmoCh08G009210Csa3G126090Cucumber (Chinese Long) v2cmocuB875
CmoCh08G009210Csa6G076840Cucumber (Chinese Long) v2cmocuB880
CmoCh08G009210MELO3C022505Melon (DHL92) v3.5.1cmomeB806
CmoCh08G009210MELO3C006183Melon (DHL92) v3.5.1cmomeB833
CmoCh08G009210ClCG05G002190Watermelon (Charleston Gray)cmowcgB793
CmoCh08G009210ClCG06G000340Watermelon (Charleston Gray)cmowcgB796
CmoCh08G009210CSPI03G09510Wild cucumber (PI 183967)cmocpiB886
CmoCh08G009210CSPI06G05820Wild cucumber (PI 183967)cmocpiB893
CmoCh08G009210Lsi09G019000Bottle gourd (USVL1VR-Ls)cmolsiB804
CmoCh08G009210Cp4.1LG12g00260Cucurbita pepo (Zucchini)cmocpeB833
CmoCh08G009210Cp4.1LG17g02570Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G009210MELO3C006183.2Melon (DHL92) v3.6.1cmomedB941
CmoCh08G009210MELO3C022505.2Melon (DHL92) v3.6.1cmomedB909
CmoCh08G009210CsaV3_6G006130Cucumber (Chinese Long) v3cmocucB1047
CmoCh08G009210CsaV3_3G009630Cucumber (Chinese Long) v3cmocucB1036
CmoCh08G009210Cla97C05G082710Watermelon (97103) v2cmowmbB888
CmoCh08G009210Cla97C06G109600Watermelon (97103) v2cmowmbB892
CmoCh08G009210Bhi12G002303Wax gourdcmowgoB1089
CmoCh08G009210CsGy6G005800Cucumber (Gy14) v2cgybcmoB846
CmoCh08G009210CsGy3G009580Cucumber (Gy14) v2cgybcmoB426
CmoCh08G009210Carg11089Silver-seed gourdcarcmoB1452
CmoCh08G009210Carg14831Silver-seed gourdcarcmoB0853
CmoCh08G009210Carg10203Silver-seed gourdcarcmoB0326
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G009210CmoCh14G020430Cucurbita moschata (Rifu)cmocmoB235
CmoCh08G009210CmoCh17G000310Cucurbita moschata (Rifu)cmocmoB314
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G009210Cucumber (Chinese Long) v3cmocucB1041
CmoCh08G009210Wax gourdcmowgoB1099
CmoCh08G009210Cucurbita moschata (Rifu)cmocmoB297
CmoCh08G009210Cucurbita moschata (Rifu)cmocmoB486
CmoCh08G009210Cucumber (Gy14) v1cgycmoB0722
CmoCh08G009210Cucurbita maxima (Rimu)cmacmoB839
CmoCh08G009210Wild cucumber (PI 183967)cmocpiB891
CmoCh08G009210Melon (DHL92) v3.5.1cmomeB835
CmoCh08G009210Watermelon (97103) v1cmowmB859
CmoCh08G009210Melon (DHL92) v3.6.1cmomedB944