CmoCh14G020430 (gene) Cucurbita moschata (Rifu)

NameCmoCh14G020430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLateral organ boundaries (LOB) domain family protein
LocationCmo_Chr14 : 14933551 .. 14934653 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAAATCCATACTTGTCTTGTTCTTCCAGTAAGCCTTGCTTAGCTTCTGATGAAAGAACGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGAAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCAGCCGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTATTGCATATTCCTGAACACAAGCGCCTCGATGCAGCTATAACCATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGTAAAACAAAATTAGCTGAAGCTCTATTCGATAACAATTTGGCTTTCGAAAATGTAAACTAATTCGAGTGCCATACATTATTTTTTAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACCGCACCACATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAGATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAACTCGTGATTGGACTGCTAATAATCTCAGTGTTCTTCCTGGCTGATCAATAAGTTAAAACTTCAGCTTACTTATATCATGTTTTGATCATCATGAAGGTTTCAATAACAAGCTTGTAAAACTCTTTTCTCATCTATTTCTATTTGAAAATTATGCAACCACTACCCTTAAAAGCAGAAATGAAGCAGACATTTGTGTTCTTTATACTTCAATTCAATGGGAAAAGTGAACTTTGCAT

mRNA sequence

TATAAATCCATACTTGTCTTGTTCTTCCAGTAAGCCTTGCTTAGCTTCTGATGAAAGAACGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGAAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCAGCCGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTATTGCATATTCCTGAACACAAGCGCCTCGATGCAGCTATAACCATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACCGCACCACATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAGATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAACTCGTGATTGGACTGCTAATAATCTCAGTGTTCTTCCTGGCTGATCAATAAGTTAAAACTTCAGCTTACTTATATCATGTTTTGATCATCATGAAGGTTTCAATAACAAGCTTGTAAAACTCTTTTCTCATCTATTTCTATTTGAAAATTATGCAACCACTACCCTTAAAAGCAGAAATGAAGCAGACATTTGTGTTCTTTATACTTCAATTCAATGGGAAAAGTGAACTTTGCAT

Coding sequence (CDS)

ATGAAAGAACGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGAAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCAGCCGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTATTGCATATTCCTGAACACAAGCGCCTCGATGCAGCTATAACCATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACCGCACCACATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAGATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAA
BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-54
Identity = 115/184 (62.50%), Postives = 132/184 (71.74%), Query Frame = 1

Query: 16  GGGGC----KEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 75
           GGGGC      G GGSS  G GGPCGACKFLRRKC P CIFAPYFDSEQG+ +FAAVHKV
Sbjct: 14  GGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKV 73

Query: 76  FGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSY 135
           FGASNVSKLLLHIP H+R DA +TICYEAQAR+R+P++GCVAHIFALQQQ   LQ E+SY
Sbjct: 74  FGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSY 133

Query: 136 LQAYLAASEL----SRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPV 192
           LQA+LA+ EL    +R  P PQ QP     P   +I +LP     LPS   DL+ + D  
Sbjct: 134 LQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPS-TYDLASIFDQT 193

BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-49
Identity = 105/177 (59.32%), Postives = 127/177 (71.75%), Query Frame = 1

Query: 23  GNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLL 82
           GN  SSS G GGPCGACKFLRRKC   CIFAPYFDSEQG  HFAAVHKVFGASNVSKLL 
Sbjct: 5   GNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLH 64

Query: 83  HIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELS 142
           H+PEHKR DA ++IC+EAQAR+R+P++GCV+HI +LQQQ   LQ ELSYLQA+LA  EL 
Sbjct: 65  HVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLEL- 124

Query: 143 RTAPHPQAQPQDLVKPTIPSIVNLPL-DCPSLPSAASDLSLLLDPVEQASPAKLQSP 199
                PQ QP  +   +  S+  L + D P++  +  DLS + +PV  ++ A  Q P
Sbjct: 125 -----PQPQPPQVPVSSSGSLQALSITDLPTISPSVYDLSSIFEPVMSSTWAMQQQP 175

BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 79/137 (57.66%), Postives = 95/137 (69.34%), Query Frame = 1

Query: 23  GNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLL 82
           GN      G  GPCGACKFLRRKC   C+FAPYFD+EQGT  FAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 83  HIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELS 142
            +P HKRLDA +T+CYEA AR+R+PV+G V H+F+LQ Q   LQ EL+++QA      LS
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQA-----RLS 123

Query: 143 RTAPHPQAQPQDLVKPT 160
                P   PQ +  P+
Sbjct: 124 TIQRFPLQSPQQMQPPS 135

BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2)

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38
Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 1

Query: 28  SSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLLHIPEH 87
           S+ G GGPCGACKFLRRKC  +C+FAPYFDS +GT+HF AVHKVFGASN SKLL+ IP  
Sbjct: 4   STTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPAS 63

Query: 88  KRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELSRTAPH 147
           +RLDA +T+ YEA AR+R+PV+GCV HIFALQ Q   LQ EL+Y+Q     ++LS     
Sbjct: 64  RRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQ-----TQLSTLQGL 123

Query: 148 PQAQPQDLVKPTIPSIVNLPL-----DCPSLPSAASDLSLLLDPVEQASPAK-LQSPLE 201
           P    Q+  +    S  N+PL        ++ S++S +  +    EQ  P + ++ P E
Sbjct: 124 PPPNSQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHIPCMSQQQEQEQPKEAIEVPTE 177

BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 1

Query: 24  NGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLLH 83
           +G  ++ G+G PCGACKFLRRKC  +CIFAPYF SEQG   FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 84  IPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELS 143
           +P H R +A +TI YEAQAR+ +PV+GCV+HIFALQQQ A LQ ++  ++A +A  + S
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTS 122

BLAST of CmoCh14G020430 vs. TrEMBL
Match: A0A0A0L4D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126090 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 6.3e-98
Identity = 193/233 (82.83%), Postives = 206/233 (88.41%), Query Frame = 1

Query: 11  MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 70
           MSSR  GG C +G GG S NGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHK
Sbjct: 1   MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHK 60

Query: 71  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 130
           VFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV GCV+HIFALQQQAARLQ+E+S
Sbjct: 61  VFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEIS 120

Query: 131 YLQAYLAASELSRTAPHPQAQPQDLV-KPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQ 190
           YLQAYLA SEL R+APH QAQP  LV KPT+ SI++LP DCPS P A SDLSLLLDPVEQ
Sbjct: 121 YLQAYLATSELPRSAPHLQAQPPALVKKPTLSSIISLPSDCPSFP-AESDLSLLLDPVEQ 180

Query: 191 ASPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 243
            S  KLQSPLE  QI SNNFPSMGSIDQQ+VQKQLS+MQRIGASLFP +PKRA
Sbjct: 181 VSQEKLQSPLESYQIGSNNFPSMGSIDQQVVQKQLSSMQRIGASLFPNIPKRA 231

BLAST of CmoCh14G020430 vs. TrEMBL
Match: B9RDE1_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1612280 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.3e-54
Identity = 123/178 (69.10%), Postives = 134/178 (75.28%), Query Frame = 1

Query: 16  GGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGAS 75
           GG G   G GG  S+ SGGPCGACKFLRRKC P CIFAPYFDSEQG  HFAAVHKVFGAS
Sbjct: 11  GGSG---GVGGGGSSSSGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGAS 70

Query: 76  NVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAY 135
           NVSKLLLHIP HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ ELSYLQA+
Sbjct: 71  NVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAH 130

Query: 136 LAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQASPA 194
           LA  EL   +P P   PQ LV P   SI +LP    S+P A  DLS L DP+ Q SP+
Sbjct: 131 LATLEL--PSPPPPPPPQSLVPPPPLSIADLP-SASSVP-ATYDLSSLFDPMTQPSPS 181

BLAST of CmoCh14G020430 vs. TrEMBL
Match: A0A0D2RDP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G114400 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54
Identity = 130/231 (56.28%), Postives = 147/231 (63.64%), Query Frame = 1

Query: 17  GGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASN 76
           GG      GG+   G GGPCGACKFLRRKC P CIFAPYFDSEQG  HFAAVHKVFGASN
Sbjct: 9   GGAAGSSTGGAVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASN 68

Query: 77  VSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYL 136
           VSKLLLH+P HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ ELSYLQA+L
Sbjct: 69  VSKLLLHVPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAHL 128

Query: 137 AASELSR---TAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQASPA 196
           A  EL      +P P    Q L++P        PL    LP A  DLS L DP+ Q S A
Sbjct: 129 ATLELPTPPLPSPPPPPPQQTLMEPP-------PLSISDLPPATYDLSTLFDPMVQPSWA 188

Query: 197 KLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQ----RIGASLFPYVPK 241
             Q      QI   +  S+GS D Q + ++L   Q    R+ AS  P   K
Sbjct: 189 MQQR-----QINQFDSSSLGSGDLQALARELLHRQGSPPRLPASPSPSFSK 227

BLAST of CmoCh14G020430 vs. TrEMBL
Match: A0A067KAC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54
Identity = 131/225 (58.22%), Postives = 152/225 (67.56%), Query Frame = 1

Query: 9   AEMSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAV 68
           A  SS  G GG   G GGSSS+G  GPCGACKFLRRKC P CIFAPYFDSEQG  HFAAV
Sbjct: 5   ANPSSSGGSGG---GGGGSSSSGGSGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAV 64

Query: 69  HKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVE 128
           HKVFGASNVSKLLLHIP HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ E
Sbjct: 65  HKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAE 124

Query: 129 LSYLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAAS-----DLSLL 188
           L+YLQA+LA  E+  + P P   P  LV P       LPL    LPSA+S     DLS L
Sbjct: 125 LTYLQAHLATLEVP-SPPPPPPPPPALVTP-------LPLSISDLPSASSMPATYDLSSL 184

Query: 189 LDPVEQAS---PAKLQSPLEFCQIRSNNFPSM-GSIDQQIVQKQL 225
            DP+ Q S     +   P +F    +++ P++ G  D Q + ++L
Sbjct: 185 FDPITQPSWTMQQRQMDPRQFGGSSTSSSPAISGGGDLQSLAREL 218

BLAST of CmoCh14G020430 vs. TrEMBL
Match: B9GPH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15000g PE=4 SV=2)

HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54
Identity = 121/181 (66.85%), Postives = 132/181 (72.93%), Query Frame = 1

Query: 11  MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 70
           ++S  GGG    G  G SS G GGPCGACKFLRRKC P CIFAPYFDSEQG  HFAAVHK
Sbjct: 9   INSGVGGGSSGGGGAGGSSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHK 68

Query: 71  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 130
           VFGASNVSKLLLHIP HKR DA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ ELS
Sbjct: 69  VFGASNVSKLLLHIPAHKRPDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELS 128

Query: 131 YLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQA 190
           YLQA+LAA E+    P P   P  LV     SI +LP    S+P AA DLS L DP+ Q 
Sbjct: 129 YLQAHLAAMEVPSPPPPP---PPALVTSPPFSIADLP-SASSIPGAAYDLSSLFDPMVQP 185

Query: 191 S 192
           S
Sbjct: 189 S 185

BLAST of CmoCh14G020430 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 115/184 (62.50%), Postives = 132/184 (71.74%), Query Frame = 1

Query: 16  GGGGC----KEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 75
           GGGGC      G GGSS  G GGPCGACKFLRRKC P CIFAPYFDSEQG+ +FAAVHKV
Sbjct: 14  GGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKV 73

Query: 76  FGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSY 135
           FGASNVSKLLLHIP H+R DA +TICYEAQAR+R+P++GCVAHIFALQQQ   LQ E+SY
Sbjct: 74  FGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSY 133

Query: 136 LQAYLAASEL----SRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPV 192
           LQA+LA+ EL    +R  P PQ QP     P   +I +LP     LPS   DL+ + D  
Sbjct: 134 LQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPS-TYDLASIFDQT 193

BLAST of CmoCh14G020430 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-50
Identity = 105/177 (59.32%), Postives = 127/177 (71.75%), Query Frame = 1

Query: 23  GNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLL 82
           GN  SSS G GGPCGACKFLRRKC   CIFAPYFDSEQG  HFAAVHKVFGASNVSKLL 
Sbjct: 5   GNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLH 64

Query: 83  HIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELS 142
           H+PEHKR DA ++IC+EAQAR+R+P++GCV+HI +LQQQ   LQ ELSYLQA+LA  EL 
Sbjct: 65  HVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLEL- 124

Query: 143 RTAPHPQAQPQDLVKPTIPSIVNLPL-DCPSLPSAASDLSLLLDPVEQASPAKLQSP 199
                PQ QP  +   +  S+  L + D P++  +  DLS + +PV  ++ A  Q P
Sbjct: 125 -----PQPQPPQVPVSSSGSLQALSITDLPTISPSVYDLSSIFEPVMSSTWAMQQQP 175

BLAST of CmoCh14G020430 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-39
Identity = 79/137 (57.66%), Postives = 95/137 (69.34%), Query Frame = 1

Query: 23  GNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLL 82
           GN      G  GPCGACKFLRRKC   C+FAPYFD+EQGT  FAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 83  HIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELS 142
            +P HKRLDA +T+CYEA AR+R+PV+G V H+F+LQ Q   LQ EL+++QA      LS
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQA-----RLS 123

Query: 143 RTAPHPQAQPQDLVKPT 160
                P   PQ +  P+
Sbjct: 124 TIQRFPLQSPQQMQPPS 135

BLAST of CmoCh14G020430 vs. TAIR10
Match: AT4G00210.1 (AT4G00210.1 LOB domain-containing protein 31)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-39
Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 1

Query: 28  SSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLLHIPEH 87
           S+ G GGPCGACKFLRRKC  +C+FAPYFDS +GT+HF AVHKVFGASN SKLL+ IP  
Sbjct: 4   STTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPAS 63

Query: 88  KRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELSRTAPH 147
           +RLDA +T+ YEA AR+R+PV+GCV HIFALQ Q   LQ EL+Y+Q     ++LS     
Sbjct: 64  RRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQ-----TQLSTLQGL 123

Query: 148 PQAQPQDLVKPTIPSIVNLPL-----DCPSLPSAASDLSLLLDPVEQASPAK-LQSPLE 201
           P    Q+  +    S  N+PL        ++ S++S +  +    EQ  P + ++ P E
Sbjct: 124 PPPNSQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHIPCMSQQQEQEQPKEAIEVPTE 177

BLAST of CmoCh14G020430 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 1

Query: 24  NGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLLH 83
           +G  ++ G+G PCGACKFLRRKC  +CIFAPYF SEQG   FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 84  IPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAYLAASELS 143
           +P H R +A +TI YEAQAR+ +PV+GCV+HIFALQQQ A LQ ++  ++A +A  + S
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTS 122

BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|449433121|ref|XP_004134346.1| (PREDICTED: LOB domain-containing protein 18 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 9.1e-98
Identity = 193/233 (82.83%), Postives = 206/233 (88.41%), Query Frame = 1

Query: 11  MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 70
           MSSR  GG C +G GG S NGSGGPCGACKFLRRKC PECIFAPYFDSEQG+THFAAVHK
Sbjct: 1   MSSRRSGGSCTKGKGGGS-NGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHK 60

Query: 71  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 130
           VFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV GCV+HIFALQQQAARLQ+E+S
Sbjct: 61  VFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEIS 120

Query: 131 YLQAYLAASELSRTAPHPQAQPQDLV-KPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQ 190
           YLQAYLA SEL R+APH QAQP  LV KPT+ SI++LP DCPS P A SDLSLLLDPVEQ
Sbjct: 121 YLQAYLATSELPRSAPHLQAQPPALVKKPTLSSIISLPSDCPSFP-AESDLSLLLDPVEQ 180

Query: 191 ASPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 243
            S  KLQSPLE  QI SNNFPSMGSIDQQ+VQKQLS+MQRIGASLFP +PKRA
Sbjct: 181 VSQEKLQSPLESYQIGSNNFPSMGSIDQQVVQKQLSSMQRIGASLFPNIPKRA 231

BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|659075449|ref|XP_008438149.1| (PREDICTED: LOB domain-containing protein 18 [Cucumis melo])

HSP 1 Score: 363.2 bits (931), Expect = 3.5e-97
Identity = 195/233 (83.69%), Postives = 204/233 (87.55%), Query Frame = 1

Query: 11  MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 70
           MSSR   G C +G GG S NGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK
Sbjct: 1   MSSRRSSGSCTKGKGGGS-NGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 60

Query: 71  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 130
           VFGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQQQAARLQ+E+S
Sbjct: 61  VFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAARLQIEIS 120

Query: 131 YLQAYLAASELSRTAPHPQAQPQDLV-KPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQ 190
           YLQ YLA SEL R APH QAQP  LV KPT+ SIV+LP DCPS P A SDLSLLLDPVEQ
Sbjct: 121 YLQGYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFP-AESDLSLLLDPVEQ 180

Query: 191 ASPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 243
           AS  KLQSPLE  QI SNNFPSM SIDQQ+VQKQLS+MQRIGASLFP VPKR+
Sbjct: 181 ASQEKLQSPLESYQIGSNNFPSMVSIDQQVVQKQLSSMQRIGASLFPNVPKRS 231

BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|255541332|ref|XP_002511730.1| (PREDICTED: LOB domain-containing protein 18 [Ricinus communis])

HSP 1 Score: 219.9 bits (559), Expect = 4.7e-54
Identity = 123/178 (69.10%), Postives = 134/178 (75.28%), Query Frame = 1

Query: 16  GGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVFGAS 75
           GG G   G GG  S+ SGGPCGACKFLRRKC P CIFAPYFDSEQG  HFAAVHKVFGAS
Sbjct: 11  GGSG---GVGGGGSSSSGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGAS 70

Query: 76  NVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYLQAY 135
           NVSKLLLHIP HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ ELSYLQA+
Sbjct: 71  NVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQAH 130

Query: 136 LAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQASPA 194
           LA  EL   +P P   PQ LV P   SI +LP    S+P A  DLS L DP+ Q SP+
Sbjct: 131 LATLEL--PSPPPPPPPQSLVPPPPLSIADLP-SASSVP-ATYDLSSLFDPMTQPSPS 181

BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|698498904|ref|XP_009795320.1| (PREDICTED: LOB domain-containing protein 30 [Nicotiana sylvestris])

HSP 1 Score: 219.2 bits (557), Expect = 8.1e-54
Identity = 126/193 (65.28%), Postives = 136/193 (70.47%), Query Frame = 1

Query: 16  GGGGCKEGNGGSSSNGSG--------GPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAA 75
           GGGG   G  GSSS G G        GPCGACKFLRRKC   CIFAPYFDSEQG  HFAA
Sbjct: 18  GGGGVGGGTSGSSSTGGGGAGGGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAA 77

Query: 76  VHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQV 135
           VHKVFGASNVSKLLLHIP HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ 
Sbjct: 78  VHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQA 137

Query: 136 ELSYLQAYLAASELSRTAPHPQA-QPQDLVKP---TIPSIVNLPLDCPSLPSAASDLSLL 195
           ELSYLQA+LA  EL    P P + QPQ L+ P      SI +LP   PS+  AA DLS L
Sbjct: 138 ELSYLQAHLATLELPTPPPQPPSQQPQTLLPPQPAAALSITDLPTAGPSILPAAYDLSSL 197

Query: 196 LDPVEQASPAKLQ 197
            DP+ Q S A  Q
Sbjct: 198 FDPMVQPSWAMQQ 210

BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|1012025631|ref|XP_015950854.1| (PREDICTED: LOB domain-containing protein 18 [Arachis duranensis])

HSP 1 Score: 219.2 bits (557), Expect = 8.1e-54
Identity = 120/193 (62.18%), Postives = 136/193 (70.47%), Query Frame = 1

Query: 13  SRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKVF 72
           S  GGGG    +GG  S+G GGPCGACKFLRRKC P CIFAPYFDSEQG THFAAVHKVF
Sbjct: 10  SPSGGGGGGSSSGGGGSSGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVF 69

Query: 73  GASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELSYL 132
           GASNVSKLL++IP HKRLDA +TICYEAQAR+R+PV+GCVAHIFALQQQ   LQ ELSYL
Sbjct: 70  GASNVSKLLMNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQIVNLQAELSYL 129

Query: 133 QAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAAS-----DLSLLLDPV 192
           Q YLA  EL      P   PQ  + P   SI +LP   P+  S A+     DLS L +P+
Sbjct: 130 QGYLATLELPHPPQLPPTPPQPTLAPPTLSISDLPPPHPTPASTATVPITYDLSSLFEPM 189

Query: 193 EQASPAKLQSPLE 201
            Q S A    P++
Sbjct: 190 AQTSWAMHNRPID 202

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LBD18_ARATH2.8e-5462.50LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD30_ARATH2.7e-4959.32LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD19_ARATH2.8e-3857.66LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1[more]
LBD31_ARATH2.8e-3849.16LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2[more]
LBD16_ARATH1.8e-3762.18LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L4D4_CUCSA6.3e-9882.83Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126090 PE=4 SV=1[more]
B9RDE1_RICCO3.3e-5469.10LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1612280 PE=4... [more]
A0A0D2RDP5_GOSRA9.6e-5456.28Uncharacterized protein OS=Gossypium raimondii GN=B456_008G114400 PE=4 SV=1[more]
A0A067KAC7_JATCU9.6e-5458.22Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1[more]
B9GPH4_POPTR9.6e-5466.85Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15000g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT2G45420.11.6e-5562.50 LOB domain-containing protein 18[more]
AT4G00220.11.5e-5059.32 Lateral organ boundaries (LOB) domain family protein[more]
AT2G45410.11.6e-3957.66 LOB domain-containing protein 19[more]
AT4G00210.11.6e-3949.16 LOB domain-containing protein 31[more]
AT2G42430.11.0e-3862.18 lateral organ boundaries-domain 16[more]
Match NameE-valueIdentityDescription
gi|449433121|ref|XP_004134346.1|9.1e-9882.83PREDICTED: LOB domain-containing protein 18 [Cucumis sativus][more]
gi|659075449|ref|XP_008438149.1|3.5e-9783.69PREDICTED: LOB domain-containing protein 18 [Cucumis melo][more]
gi|255541332|ref|XP_002511730.1|4.7e-5469.10PREDICTED: LOB domain-containing protein 18 [Ricinus communis][more]
gi|698498904|ref|XP_009795320.1|8.1e-5465.28PREDICTED: LOB domain-containing protein 30 [Nicotiana sylvestris][more]
gi|1012025631|ref|XP_015950854.1|8.1e-5462.18PREDICTED: LOB domain-containing protein 18 [Arachis duranensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045010 actin nucleation
biological_process GO:0007155 cell adhesion
biological_process GO:0090558 plant epidermis development
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0048468 cell development
biological_process GO:0008150 biological_process
biological_process GO:0010015 root morphogenesis
biological_process GO:0010089 xylem development
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010311 lateral root formation
biological_process GO:0071555 cell wall organization
biological_process GO:0044036 cell wall macromolecule metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G020430.1CmoCh14G020430.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 35..133
score: 4.8
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 34..136
score: 23
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 8..196
score: 5.1
NoneNo IPR availablePANTHERPTHR31529:SF3LOB DOMAIN-CONTAINING PROTEIN 18-RELATEDcoord: 8..196
score: 5.1

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G020430Cucsa.362830Cucumber (Gy14) v1cgycmoB0992
CmoCh14G020430CmaCh14G019810Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G020430CmaCh17G000280Cucurbita maxima (Rimu)cmacmoB350
CmoCh14G020430CmaCh08G009530Cucurbita maxima (Rimu)cmacmoB885
CmoCh14G020430Cla006955Watermelon (97103) v1cmowmB241
CmoCh14G020430Csa6G076840Cucumber (Chinese Long) v2cmocuB257
CmoCh14G020430Csa3G126090Cucumber (Chinese Long) v2cmocuB239
CmoCh14G020430MELO3C022505Melon (DHL92) v3.5.1cmomeB199
CmoCh14G020430MELO3C006183Melon (DHL92) v3.5.1cmomeB230
CmoCh14G020430ClCG06G000340Watermelon (Charleston Gray)cmowcgB225
CmoCh14G020430CSPI03G09510Wild cucumber (PI 183967)cmocpiB243
CmoCh14G020430CSPI06G05820Wild cucumber (PI 183967)cmocpiB263
CmoCh14G020430Lsi09G019000Bottle gourd (USVL1VR-Ls)cmolsiB211
CmoCh14G020430Cp4.1LG12g00260Cucurbita pepo (Zucchini)cmocpeB223
CmoCh14G020430Cp4.1LG03g17200Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G020430MELO3C006183.2Melon (DHL92) v3.6.1cmomedB260
CmoCh14G020430MELO3C022505.2Melon (DHL92) v3.6.1cmomedB221
CmoCh14G020430CsaV3_6G006130Cucumber (Chinese Long) v3cmocucB0308
CmoCh14G020430CsaV3_3G009630Cucumber (Chinese Long) v3cmocucB0283
CmoCh14G020430Cla97C06G109600Watermelon (97103) v2cmowmbB249
CmoCh14G020430Bhi01G000191Wax gourdcmowgoB0308
CmoCh14G020430Bhi12G002303Wax gourdcmowgoB0294
CmoCh14G020430CsGy6G005800Cucumber (Gy14) v2cgybcmoB717
CmoCh14G020430CsGy3G009580Cucumber (Gy14) v2cgybcmoB290
CmoCh14G020430Carg10203Silver-seed gourdcarcmoB0319
CmoCh14G020430Carg14831Silver-seed gourdcarcmoB0850
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh14G020430CmoCh17G000310Cucurbita moschata (Rifu)cmocmoB198
CmoCh14G020430CmoCh08G009210Cucurbita moschata (Rifu)cmocmoB235