CmoCh14G020430 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAAATCCATACTTGTCTTGTTCTTCCAGTAAGCCTTGCTTAGCTTCTGATGAAAGAACGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGAAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCAGCCGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTATTGCATATTCCTGAACACAAGCGCCTCGATGCAGCTATAACCATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGTAAAACAAAATTAGCTGAAGCTCTATTCGATAACAATTTGGCTTTCGAAAATGTAAACTAATTCGAGTGCCATACATTATTTTTTAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACCGCACCACATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAGATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAACTCGTGATTGGACTGCTAATAATCTCAGTGTTCTTCCTGGCTGATCAATAAGTTAAAACTTCAGCTTACTTATATCATGTTTTGATCATCATGAAGGTTTCAATAACAAGCTTGTAAAACTCTTTTCTCATCTATTTCTATTTGAAAATTATGCAACCACTACCCTTAAAAGCAGAAATGAAGCAGACATTTGTGTTCTTTATACTTCAATTCAATGGGAAAAGTGAACTTTGCAT TATAAATCCATACTTGTCTTGTTCTTCCAGTAAGCCTTGCTTAGCTTCTGATGAAAGAACGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGAAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCAGCCGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTATTGCATATTCCTGAACACAAGCGCCTCGATGCAGCTATAACCATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACCGCACCACATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAGATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAACTCGTGATTGGACTGCTAATAATCTCAGTGTTCTTCCTGGCTGATCAATAAGTTAAAACTTCAGCTTACTTATATCATGTTTTGATCATCATGAAGGTTTCAATAACAAGCTTGTAAAACTCTTTTCTCATCTATTTCTATTTGAAAATTATGCAACCACTACCCTTAAAAGCAGAAATGAAGCAGACATTTGTGTTCTTTATACTTCAATTCAATGGGAAAAGTGAACTTTGCAT ATGAAAGAACGGCAAGAAAGCAAGGCCGAGATGAGCTCGAGGCACGGCGGTGGAGGTTGCAAGGAGGGCAATGGTGGTAGTAGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGAAGGAAGTGTACACCGGAGTGTATATTTGCACCTTACTTTGACTCTGAACAAGGCACGACTCATTTTGCAGCCGTGCACAAAGTGTTCGGAGCTAGTAATGTGTCGAAGCTGCTATTGCATATTCCTGAACACAAGCGCCTCGATGCAGCTATAACCATATGCTACGAGGCACAAGCTCGTGTTAGAGAGCCAGTTTTTGGTTGTGTTGCTCATATCTTTGCCCTTCAACAACAGGCTGCGAGGTTGCAAGTAGAGCTCTCATACTTGCAAGCGTACCTAGCAGCATCTGAGCTTTCAAGAACCGCACCACATCCACAGGCACAGCCACAAGATCTGGTCAAGCCAACAATACCCTCAATTGTAAACCTTCCATTAGATTGCCCTTCTTTGCCTTCTGCTGCATCAGATCTTTCACTGCTTCTCGATCCTGTGGAGCAAGCTTCGCCGGCAAAGTTGCAGTCTCCATTGGAATTCTGTCAAATTAGAAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAGATTGTCCAAAAACAACTCTCCACGATGCAACGCATTGGTGCCTCGCTATTTCCCTACGTCCCTAAACGAGCCTAA
BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2) HSP 1 Score: 213.4 bits (542), Expect = 2.8e-54 Identity = 115/184 (62.50%), Postives = 132/184 (71.74%), Query Frame = 1
BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.7e-49 Identity = 105/177 (59.32%), Postives = 127/177 (71.75%), Query Frame = 1
BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38 Identity = 79/137 (57.66%), Postives = 95/137 (69.34%), Query Frame = 1
BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 2.8e-38 Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 1
BLAST of CmoCh14G020430 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37 Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TrEMBL
Match: A0A0A0L4D4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126090 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 6.3e-98 Identity = 193/233 (82.83%), Postives = 206/233 (88.41%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TrEMBL
Match: B9RDE1_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1612280 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 3.3e-54 Identity = 123/178 (69.10%), Postives = 134/178 (75.28%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TrEMBL
Match: A0A0D2RDP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G114400 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54 Identity = 130/231 (56.28%), Postives = 147/231 (63.64%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TrEMBL
Match: A0A067KAC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14515 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54 Identity = 131/225 (58.22%), Postives = 152/225 (67.56%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TrEMBL
Match: B9GPH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15000g PE=4 SV=2) HSP 1 Score: 218.4 bits (555), Expect = 9.6e-54 Identity = 121/181 (66.85%), Postives = 132/181 (72.93%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18) HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55 Identity = 115/184 (62.50%), Postives = 132/184 (71.74%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 196.8 bits (499), Expect = 1.5e-50 Identity = 105/177 (59.32%), Postives = 127/177 (71.75%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19) HSP 1 Score: 160.2 bits (404), Expect = 1.6e-39 Identity = 79/137 (57.66%), Postives = 95/137 (69.34%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TAIR10
Match: AT4G00210.1 (AT4G00210.1 LOB domain-containing protein 31) HSP 1 Score: 160.2 bits (404), Expect = 1.6e-39 Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 1
BLAST of CmoCh14G020430 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16) HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38 Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 1
BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|449433121|ref|XP_004134346.1| (PREDICTED: LOB domain-containing protein 18 [Cucumis sativus]) HSP 1 Score: 365.2 bits (936), Expect = 9.1e-98 Identity = 193/233 (82.83%), Postives = 206/233 (88.41%), Query Frame = 1
BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|659075449|ref|XP_008438149.1| (PREDICTED: LOB domain-containing protein 18 [Cucumis melo]) HSP 1 Score: 363.2 bits (931), Expect = 3.5e-97 Identity = 195/233 (83.69%), Postives = 204/233 (87.55%), Query Frame = 1
BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|255541332|ref|XP_002511730.1| (PREDICTED: LOB domain-containing protein 18 [Ricinus communis]) HSP 1 Score: 219.9 bits (559), Expect = 4.7e-54 Identity = 123/178 (69.10%), Postives = 134/178 (75.28%), Query Frame = 1
BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|698498904|ref|XP_009795320.1| (PREDICTED: LOB domain-containing protein 30 [Nicotiana sylvestris]) HSP 1 Score: 219.2 bits (557), Expect = 8.1e-54 Identity = 126/193 (65.28%), Postives = 136/193 (70.47%), Query Frame = 1
BLAST of CmoCh14G020430 vs. NCBI nr
Match: gi|1012025631|ref|XP_015950854.1| (PREDICTED: LOB domain-containing protein 18 [Arachis duranensis]) HSP 1 Score: 219.2 bits (557), Expect = 8.1e-54 Identity = 120/193 (62.18%), Postives = 136/193 (70.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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