Cucsa.362830 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.362830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLOB domain-containing protein, putative
Locationscaffold03611 : 547922 .. 548380 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACACACAAAACTTTCACACAATTCATCCAAATTTTCATCAAACTTTCAAATGTAAAGGGAAAAACCCCATTTGCCCTTTCATATGACCCACACCCAAACATCAATTGCCCTCCATCAACATACCCTCATGAGTACCGGCGAAGGCGGCGTCGCTCACGGCGGAGGGCCATGCGGCGCCTGCAAGTTTTTGAGGAGAAAGTGTGTGAAAGGCTGCATTTTCGCACCCTATTTCGACTCTGATCAAGGCGCCGCCCACTTCGCCGCTGTTCATAAGGTGTTTGGAGCTAGCAATGCCTCTAAGCTCCTCCACCGCATCCCACCTCCCAAACGTCTCGACGCTTGCGTTACGCTTTGTTATGAAGCTCTCGCTAGGGTTCGAGACCCTGTCTATGGTTGCGTTTCTCAAATTTTCTCCCTCCAACAACAGGTTAGTTCGCTAATTATAGTTGATACCTAA

mRNA sequence

AAACACACAAAACTTTCACACAATTCATCCAAATTTTCATCAAACTTTCAAATGTAAAGGGAAAAACCCCATTTGCCCTTTCATATGACCCACACCCAAACATCAATTGCCCTCCATCAACATACCCTCATGAGTACCGGCGAAGGCGGCGTCGCTCACGGCGGAGGGCCATGCGGCGCCTGCAAGTTTTTGAGGAGAAAGTGTGTGAAAGGCTGCATTTTCGCACCCTATTTCGACTCTGATCAAGGCGCCGCCCACTTCGCCGCTGTTCATAAGGTGTTTGGAGCTAGCAATGCCTCTAAGCTCCTCCACCGCATCCCACCTCCCAAACGTCTCGACGCTTGCGTTACGCTTTGTTATGAAGCTCTCGCTAGGGTTCGAGACCCTGTCTATGGTTGCGTTTCTCAAATTTTCTCCCTCCAACAACAGGTTAGTTCGCTAATTATAGTTGATACCTAA

Coding sequence (CDS)

ATGACCCACACCCAAACATCAATTGCCCTCCATCAACATACCCTCATGAGTACCGGCGAAGGCGGCGTCGCTCACGGCGGAGGGCCATGCGGCGCCTGCAAGTTTTTGAGGAGAAAGTGTGTGAAAGGCTGCATTTTCGCACCCTATTTCGACTCTGATCAAGGCGCCGCCCACTTCGCCGCTGTTCATAAGGTGTTTGGAGCTAGCAATGCCTCTAAGCTCCTCCACCGCATCCCACCTCCCAAACGTCTCGACGCTTGCGTTACGCTTTGTTATGAAGCTCTCGCTAGGGTTCGAGACCCTGTCTATGGTTGCGTTTCTCAAATTTTCTCCCTCCAACAACAGGTTAGTTCGCTAATTATAGTTGATACCTAA

Protein sequence

MTHTQTSIALHQHTLMSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSLIIVDT*
Homology
[Close]
BLAST of Cucsa.362830 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.4e-40
Identity = 79/103 (76.70%), Postives = 87/103 (84.47%), Query Frame = 1 

Query: 17  STGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLH 76
           S+  GG   GGGPCGACKFLRRKCV GCIFAPYFDS+QGAAHFAAVHKVFGASN SKLLH
Sbjct: 8   SSSSGG---GGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLH 67

Query: 77  RIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            +P  KR DA V++C+EA AR+RDP+YGCVS I SLQQQV SL
Sbjct: 68  HVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSL 107

[Close]
BLAST of Cucsa.362830 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 8.4e-39
Identity = 78/106 (73.58%), Postives = 87/106 (82.08%), Query Frame = 1 

Query: 16  MSTGE--GGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASK 75
           M TG   GG   G GPCGACKFLRRKCVKGC+FAPYFD++QG A FAAVHKVFGASNASK
Sbjct: 1   MMTGNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASK 60

Query: 76  LLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           +L R+P  KRLDA VTLCYEA+AR+RDPVYG V  +FSLQ QV +L
Sbjct: 61  MLLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNL 106

[Close]
BLAST of Cucsa.362830 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 8.4e-39
Identity = 77/105 (73.33%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 17  STGEGGVAHGG--GPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKL 76
           S+G GG + GG  GPCGACKFLRRKCV GCIFAPYFDS+QG+A+FAAVHKVFGASN SKL
Sbjct: 23  SSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKL 82

Query: 77  LHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           L  IP  +R DA VT+CYEA AR+RDP+YGCV+ IF+LQQQV +L
Sbjct: 83  LLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNL 127

[Close]
BLAST of Cucsa.362830 vs. Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 5.1e-36
Identity = 72/99 (72.73%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 21  GGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPP 80
           G     GGPCGACKFLRRKCV  C+FAPYFDS +G +HF AVHKVFGASNASKLL  IP 
Sbjct: 3   GSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPA 62

Query: 81  PKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            +RLDA VTL YEALAR+RDPVYGCV  IF+LQ QV +L
Sbjct: 63  SRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNL 101

[Close]
BLAST of Cucsa.362830 vs. Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.7e-35
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 1 

Query: 17  STGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLH 76
           +TG G  +    PCGACKFLRRKCV GCIFAP+F SDQGAA FAAVHKVFGASN SKLLH
Sbjct: 43  TTGTGTAS----PCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLH 102

Query: 77  RIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            IP  +R DA VT+ YEA AR+ DPVYGCVS I +LQQQV+SL
Sbjct: 103 HIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASL 141

[Close]
BLAST of Cucsa.362830 vs. TrEMBL
Match: A0A0A0KCW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076850 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-53
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 1 

Query: 16  MSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLL 75
           MSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLL
Sbjct: 1   MSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLL 60

Query: 76  HRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           HRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQV +L
Sbjct: 61  HRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVVNL 104

[Close]
BLAST of Cucsa.362830 vs. TrEMBL
Match: M5X800_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017589mg PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.0e-43
Identity = 87/101 (86.14%), Postives = 91/101 (90.10%), Query Frame = 1 

Query: 19  GEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRI 78
           G GG   GGGPCGACKFLRRKC+KGCIFAPYFDS+QG AHFAAVHKVFGASNASKLL RI
Sbjct: 14  GGGGGGGGGGPCGACKFLRRKCIKGCIFAPYFDSEQGTAHFAAVHKVFGASNASKLLLRI 73

Query: 79  PPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           PP KRLDA VTLCYEALARVRDPVYGCVS IF+LQQQV +L
Sbjct: 74  PPHKRLDAVVTLCYEALARVRDPVYGCVSHIFTLQQQVVNL 114

[Close]
BLAST of Cucsa.362830 vs. TrEMBL
Match: A0A022QVV5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024257mg PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-41
Identity = 81/101 (80.20%), Postives = 90/101 (89.11%), Query Frame = 1 

Query: 19  GEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRI 78
           GE G   GGGPCGACKFLRRKCV+GC+FAPYFDS+QG AHFAAVH+VFGASNASKLL RI
Sbjct: 10  GESGGGGGGGPCGACKFLRRKCVRGCVFAPYFDSEQGTAHFAAVHRVFGASNASKLLLRI 69

Query: 79  PPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           PP +RLDA +TLCYEALARVRDPVYGCV  IF+LQQQ+ +L
Sbjct: 70  PPHRRLDAVITLCYEALARVRDPVYGCVGHIFTLQQQIVNL 110

[Close]
BLAST of Cucsa.362830 vs. TrEMBL
Match: B7FKD7_MEDTR (Lateral organ boundaries (LOB) domain protein OS=Medicago truncatula GN=MTR_8g036105 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-41
Identity = 84/99 (84.85%), Postives = 86/99 (86.87%), Query Frame = 1 

Query: 21  GGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPP 80
           G    GGGPCGACKFLRRKCVKGCIFAPYFDSDQG  HFAAVHKVFGASNASKLL RIP 
Sbjct: 10  GSDQRGGGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRIPA 69

Query: 81  PKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            KRLDA VTLCYEALAR RDPVYGCV+ IF+LQQQV SL
Sbjct: 70  HKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQVMSL 108

[Close]
BLAST of Cucsa.362830 vs. TrEMBL
Match: A0A151TBN7_CAJCA (LOB domain-containing protein 31 OS=Cajanus cajan GN=KK1_019068 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.3e-41
Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 1 

Query: 21  GGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPP 80
           GG    GGPCGACKFLRRKCVKGCIFAPYFDSDQG AHFAAVHKVFGASNASKLL RIP 
Sbjct: 8   GGGTERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPA 67

Query: 81  PKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            KRLDA VTLCYEALAR RDPVYGCV+ +F+LQQQV +L
Sbjct: 68  HKRLDAVVTLCYEALARTRDPVYGCVAHLFALQQQVMNL 106

[Close]
BLAST of Cucsa.362830 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 165.6 bits (418), Expect = 1.9e-41
Identity = 79/103 (76.70%), Postives = 87/103 (84.47%), Query Frame = 1 

Query: 17  STGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLH 76
           S+  GG   GGGPCGACKFLRRKCV GCIFAPYFDS+QGAAHFAAVHKVFGASN SKLLH
Sbjct: 8   SSSSGG---GGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLH 67

Query: 77  RIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            +P  KR DA V++C+EA AR+RDP+YGCVS I SLQQQV SL
Sbjct: 68  HVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSL 107

[Close]
BLAST of Cucsa.362830 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19)

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-40
Identity = 78/106 (73.58%), Postives = 87/106 (82.08%), Query Frame = 1 

Query: 16  MSTGE--GGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASK 75
           M TG   GG   G GPCGACKFLRRKCVKGC+FAPYFD++QG A FAAVHKVFGASNASK
Sbjct: 1   MMTGNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASK 60

Query: 76  LLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           +L R+P  KRLDA VTLCYEA+AR+RDPVYG V  +FSLQ QV +L
Sbjct: 61  MLLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNL 106

[Close]
BLAST of Cucsa.362830 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 161.0 bits (406), Expect = 4.8e-40
Identity = 77/105 (73.33%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 17  STGEGGVAHGG--GPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKL 76
           S+G GG + GG  GPCGACKFLRRKCV GCIFAPYFDS+QG+A+FAAVHKVFGASN SKL
Sbjct: 23  SSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKL 82

Query: 77  LHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           L  IP  +R DA VT+CYEA AR+RDP+YGCV+ IF+LQQQV +L
Sbjct: 83  LLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNL 127

[Close]
BLAST of Cucsa.362830 vs. TAIR10
Match: AT4G00210.1 (AT4G00210.1 LOB domain-containing protein 31)

HSP 1 Score: 151.8 bits (382), Expect = 2.9e-37
Identity = 72/99 (72.73%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 21  GGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPP 80
           G     GGPCGACKFLRRKCV  C+FAPYFDS +G +HF AVHKVFGASNASKLL  IP 
Sbjct: 3   GSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPA 62

Query: 81  PKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            +RLDA VTL YEALAR+RDPVYGCV  IF+LQ QV +L
Sbjct: 63  SRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNL 101

[Close]
BLAST of Cucsa.362830 vs. TAIR10
Match: AT3G03760.1 (AT3G03760.1 LOB domain-containing protein 20)

HSP 1 Score: 148.3 bits (373), Expect = 3.2e-36
Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 1 

Query: 17  STGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLH 76
           +TG G  +    PCGACKFLRRKCV GCIFAP+F SDQGAA FAAVHKVFGASN SKLLH
Sbjct: 43  TTGTGTAS----PCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLH 102

Query: 77  RIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
            IP  +R DA VT+ YEA AR+ DPVYGCVS I +LQQQV+SL
Sbjct: 103 HIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASL 141

[Close]
BLAST of Cucsa.362830 vs. NCBI nr
Match: gi|778711170|ref|XP_004145059.2| (PREDICTED: LOB domain-containing protein 19 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 1 

Query: 1   MTHTQTSIALHQHTLMSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFA 60
           MTHTQTSIALHQHTLMSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFA
Sbjct: 1   MTHTQTSIALHQHTLMSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFA 60

Query: 61  AVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           AVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQV +L
Sbjct: 61  AVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVVNL 119

[Close]
BLAST of Cucsa.362830 vs. NCBI nr
Match: gi|659120317|ref|XP_008460130.1| (PREDICTED: LOB domain-containing protein 19 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-58
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MTHTQTSIALHQHTLMSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFA 60
           MTHTQ S ALHQ ++MS GEGGV HGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFA
Sbjct: 1   MTHTQRSTALHQDSVMSAGEGGVGHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFA 60

Query: 61  AVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           AVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQV +L
Sbjct: 61  AVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVVNL 119

[Close]
BLAST of Cucsa.362830 vs. NCBI nr
Match: gi|700191033|gb|KGN46237.1| (hypothetical protein Csa_6G076850 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-53
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 1 

Query: 16  MSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLL 75
           MSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLL
Sbjct: 1   MSTGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLL 60

Query: 76  HRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           HRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQV +L
Sbjct: 61  HRIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVVNL 104

[Close]
BLAST of Cucsa.362830 vs. NCBI nr
Match: gi|596055091|ref|XP_007220875.1| (hypothetical protein PRUPE_ppa017589mg [Prunus persica])

HSP 1 Score: 182.6 bits (462), Expect = 4.3e-43
Identity = 87/101 (86.14%), Postives = 91/101 (90.10%), Query Frame = 1 

Query: 19  GEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRI 78
           G GG   GGGPCGACKFLRRKC+KGCIFAPYFDS+QG AHFAAVHKVFGASNASKLL RI
Sbjct: 14  GGGGGGGGGGPCGACKFLRRKCIKGCIFAPYFDSEQGTAHFAAVHKVFGASNASKLLLRI 73

Query: 79  PPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           PP KRLDA VTLCYEALARVRDPVYGCVS IF+LQQQV +L
Sbjct: 74  PPHKRLDAVVTLCYEALARVRDPVYGCVSHIFTLQQQVVNL 114

[Close]
BLAST of Cucsa.362830 vs. NCBI nr
Match: gi|645253656|ref|XP_008232675.1| (PREDICTED: LOB domain-containing protein 19 [Prunus mume])

HSP 1 Score: 182.2 bits (461), Expect = 5.6e-43
Identity = 86/103 (83.50%), Postives = 91/103 (88.35%), Query Frame = 1 

Query: 17  STGEGGVAHGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLH 76
           S   GG   GGGPCGACKFLRRKC+KGCIFAPYFDS+QG AHFAAVHKVFGASNASKLL 
Sbjct: 9   SNNNGGGGGGGGPCGACKFLRRKCIKGCIFAPYFDSEQGTAHFAAVHKVFGASNASKLLL 68

Query: 77  RIPPPKRLDACVTLCYEALARVRDPVYGCVSQIFSLQQQVSSL 120
           R+PP KRLDA VTLCYEALARVRDPVYGCVS IF+LQQQV +L
Sbjct: 69  RVPPHKRLDAVVTLCYEALARVRDPVYGCVSHIFTLQQQVVNL 111

The following BLAST results are available for this feature:
BLAST of Cucsa.362830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD30_ARATH3.4e-4076.70LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD19_ARATH8.4e-3973.58LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1[more]
LBD18_ARATH8.4e-3973.33LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD31_ARATH5.1e-3672.73LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2[more]
LBD20_ARATH5.7e-3571.84LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1[more]
BLAST of Cucsa.362830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCW1_CUCSA1.4e-5398.08Uncharacterized protein OS=Cucumis sativus GN=Csa_6G076850 PE=4 SV=1[more]
M5X800_PRUPE3.0e-4386.14Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017589mg PE=4 SV=1[more]
A0A022QVV5_ERYGU1.3e-4180.20Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a024257mg PE=4 SV=1[more]
B7FKD7_MEDTR3.7e-4184.85Lateral organ boundaries (LOB) domain protein OS=Medicago truncatula GN=MTR_8g03... [more]
A0A151TBN7_CAJCA6.3e-4183.84LOB domain-containing protein 31 OS=Cajanus cajan GN=KK1_019068 PE=4 SV=1[more]
BLAST of Cucsa.362830 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00220.11.9e-4176.70 Lateral organ boundaries (LOB) domain family protein[more]
AT2G45410.14.8e-4073.58 LOB domain-containing protein 19[more]
AT2G45420.14.8e-4073.33 LOB domain-containing protein 18[more]
AT4G00210.12.9e-3772.73 LOB domain-containing protein 31[more]
AT3G03760.13.2e-3671.84 LOB domain-containing protein 20[more]
BLAST of Cucsa.362830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711170|ref|XP_004145059.2|1.4e-6298.32PREDICTED: LOB domain-containing protein 19 [Cucumis sativus][more]
gi|659120317|ref|XP_008460130.1|2.1e-5892.44PREDICTED: LOB domain-containing protein 19 [Cucumis melo][more]
gi|700191033|gb|KGN46237.1|2.1e-5398.08hypothetical protein Csa_6G076850 [Cucumis sativus][more]
gi|596055091|ref|XP_007220875.1|4.3e-4386.14hypothetical protein PRUPE_ppa017589mg [Prunus persica][more]
gi|645253656|ref|XP_008232675.1|5.6e-4383.50PREDICTED: LOB domain-containing protein 19 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.362830.1Cucsa.362830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 29..118
score: 6.5
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 28..124
score: 21
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 3..119
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.362830Csa3G126090Cucumber (Chinese Long) v2cgycuB509
Cucsa.362830CSPI03G09510Wild cucumber (PI 183967)cgycpiB537
Cucsa.362830CmaCh08G009530Cucurbita maxima (Rimu)cgycmaB1013
Cucsa.362830CmaCh17G000280Cucurbita maxima (Rimu)cgycmaB0998
Cucsa.362830CmaCh14G019810Cucurbita maxima (Rimu)cgycmaB0990
Cucsa.362830CmoCh08G009210Cucurbita moschata (Rifu)cgycmoB1013
Cucsa.362830CmoCh17G000310Cucurbita moschata (Rifu)cgycmoB0999
Cucsa.362830CmoCh14G020430Cucurbita moschata (Rifu)cgycmoB0992
Cucsa.362830Cp4.1LG17g02570Cucurbita pepo (Zucchini)cgycpeB0954
Cucsa.362830Cp4.1LG12g00260Cucurbita pepo (Zucchini)cgycpeB0947
Cucsa.362830Cp4.1LG03g17200Cucurbita pepo (Zucchini)cgycpeB0965
Cucsa.362830MELO3C006183.2Melon (DHL92) v3.6.1cgymedB592
Cucsa.362830CsaV3_6G006130Cucumber (Chinese Long) v3cgycucB556
Cucsa.362830CsaV3_3G009630Cucumber (Chinese Long) v3cgycucB553
Cucsa.362830Cla97C05G082710Watermelon (97103) v2cgywmbB622
Cucsa.362830Cla97C06G109600Watermelon (97103) v2cgywmbB625
Cucsa.362830Bhi12G002303Wax gourdcgywgoB726
Cucsa.362830Carg10204Silver-seed gourdcarcgyB0271
Cucsa.362830Carg11089Silver-seed gourdcarcgyB1193
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.362830Watermelon (97103) v2cgywmbB620
Cucsa.362830Watermelon (97103) v2cgywmbB621
Cucsa.362830Wax gourdcgywgoB724
Cucsa.362830Wax gourdcgywgoB727
Cucsa.362830Cucumber (Gy14) v1cgycgyB130
Cucsa.362830Cucumber (Gy14) v1cgycgyB132
Cucsa.362830Cucumber (Gy14) v1cgycgyB142
Cucsa.362830Cucurbita maxima (Rimu)cgycmaB0994
Cucsa.362830Cucurbita maxima (Rimu)cgycmaB0996
Cucsa.362830Cucurbita maxima (Rimu)cgycmaB1007
Cucsa.362830Cucurbita moschata (Rifu)cgycmoB1007
Cucsa.362830Cucurbita moschata (Rifu)cgycmoB0997
Cucsa.362830Wild cucumber (PI 183967)cgycpiB536
Cucsa.362830Wild cucumber (PI 183967)cgycpiB539
Cucsa.362830Wild cucumber (PI 183967)cgycpiB540
Cucsa.362830Cucumber (Chinese Long) v2cgycuB511
Cucsa.362830Melon (DHL92) v3.5.1cgymeB585
Cucsa.362830Melon (DHL92) v3.5.1cgymeB586
Cucsa.362830Melon (DHL92) v3.5.1cgymeB593
Cucsa.362830Melon (DHL92) v3.5.1cgymeB594
Cucsa.362830Watermelon (Charleston Gray)cgywcgB617
Cucsa.362830Watermelon (Charleston Gray)cgywcgB620
Cucsa.362830Watermelon (97103) v1cgywmB662
Cucsa.362830Watermelon (97103) v1cgywmB663
Cucsa.362830Watermelon (97103) v1cgywmB666
Cucsa.362830Cucurbita pepo (Zucchini)cgycpeB0969
Cucsa.362830Bottle gourd (USVL1VR-Ls)cgylsiB583
Cucsa.362830Bottle gourd (USVL1VR-Ls)cgylsiB585
Cucsa.362830Bottle gourd (USVL1VR-Ls)cgylsiB587
Cucsa.362830Melon (DHL92) v3.6.1cgymedB586
Cucsa.362830Melon (DHL92) v3.6.1cgymedB591
Cucsa.362830Silver-seed gourdcarcgyB0695
Cucsa.362830Cucumber (Chinese Long) v3cgycucB552
Cucsa.362830Cucumber (Chinese Long) v3cgycucB555