Carg13196 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13196
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	cx9C motif-containing protein 4
Location	Cucurbita_argyrosperma_scaffold_101 : 874046 .. 876845 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGATGCCTCAGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGTGACATTCAAGCTTGTCTCTCCAAAAATAACTTTCTTCCTCACAAGTAAGTTTAGATTAAGATTTTCCTTTTGTGTTTGTTTCGCGAGGAATCTCCGATGAAAGATTCTCAAGTTTCTAGGCTGTTCTGTTCATCGATGTTTGATCTTGTTCGTTTTAGTGATTTGCATGAATCAGAGGATAGATGGATTGAATTTGAATTTTATTTCTTTCTTTGTTTTCCTGTATCTGTTGACGAAACTGTGGACTGCTGTATATTCTTTGTGCTTTGCGTTTTTTCTTCCGTTTGAATTATCAGTTATCTCCGTCTGTCGTGAGATCAAGCAAAGAACGAATTAAGCTATAAAGCAGAAATGCGTTTTAATTTGATTCCTCTGTATGGAAAACGTTTGGGCTTTTACTTTTCCCTATGTTTGATCCGTTTCATTTCTCTTCGTGTTTGGTTCATCGATTCACGCACTTAGACCAAGTATTGTAGTCCTTGATTTGGGAAATTTCGAATAGATTACGGAGGTCTGTGTCTGTGCCTAAGAAATTTGTAGAATGTCAGACACCATAAAACATGTCGTTCTTCAAAATTTTGTCAGTAGTTTCTAGATGCGATCAAAATTCTGTTGGAAGGTTGTTCAAAATGTGGAAATTCAATAGTTTAGTTCAAATTTTGAGTCCACTGGAATTGATCATACATTTGACAGGCATTATGTCGAATGGATGTTGAAGTTTGTTTATTTTTATGTGTGTGTGTGTACAGCTGTATACTGTATACATAAGGTGTCTGTTGTAGTTCTATGATTATCTTCTGATCAGCAAGTAGCTGGATTTTGTTTTAGTAACGATGTGATTCTTGGAAAACTTGCTGTCCTGATTCAGGAAAAATGTTGTTTTAAACTCAAATTGCTGATCCACAAACAGAATTCCACATCAAGTTTATGCATTTTTCTTCGGAACACTTCATAGAACGCATGCCTAGGATATCAACCCCATTTCCAAAAAAGCCAATTTGATAGATTCATCAATAACCTCGGAGGTTCCAGCTTTCAAGCCCTTGAATCCAATTTCCCTCGGACTGGTCTCAAGTCCCTATGAAGTTTCAATATATTGGGATGTCTCCTAAACTTTTATTCATTGAATATGTCACTTCGATTGAAGAGTAATGGAGGCTAAGGTATTCTGCTGCTTGGCTACAGCTTCGGCTTGGGGAACCTAGAAGCTAGGTTGCAGCTCTCCATTCAATTTCCCAAAATGGTATTTTAACCTTTGAGAGGTCATTTGGGATCCTGGTTCGAAATCAAGAACCTTGGGATTTTGGAACCCATGGGGTTGATTGGTTGTATTCCTGAAGCTTGGGGTTTCCGAAGCCATTTGGGTGCAGGGTTGGGTTGGTTGGGTTTTTGAAACTTGTGTTTGAGGTGTAGGGTTGAGTTGGACTAGGTTCCAATAGCCAGTTTTTTTGGGATGTTCTTTAGTTTCCATTTTTTGTGACTTGATAATTTGTTCTGAAGTAGGAAGGATATATTAAAAAATCCATGGTTAAAGCTCGGGTTTTTTAGTCTTTTGTTTTTTCTTTTTCTGTGAATTGTTCTTTGATATAATCTTGCTGAATTTTTGGACAATCTACTAGAAAACAATTGTTCCATCCATCCAAACCAATGGATCAAACGGCCGCTCATTTGTTTTCCTCCTCTGCTGTGGATTAGCAGTTTAATTCTATATTCCCTGGAATCGGGCGACAAATACCAACGCTTAGATGACTCATTACACTTCTCTTAGATGTTGATGACTCTTTTTTTTGTGTGTTATGGGGGAAGGCTTTTGCATGTAGGTAAGTTGATGTGTCCCTGATAAGTGTGTGGATTGACATGGTTGTAGGTGCGTCAGGGTTATTCAACTATTGCAGTATTGCTGTGAAAACTGCAATTACAAGTCAACACACTGTGCTTCTGTTTCTGACCTCTTAAAGCAAATGCCAAAGCCGAAAGGCCAGAAATCTTGATCCAAGTCGAGCCAGATGTAATTCAGTCTAGACGTGACAAACTAAATTAGGTGTTTACTTATAACTCAAGCCAACATATTATGGGATGGCACAGCCAATGCTGGACGCTGAATTCTGCTAGTTTTGCAAAATAGTGCAGATGGAAGAGATGAGGCCAGAAAACCAAAATCTTTGATAGATCAACATGAACTAATGCTAATGATGTTACCATTTCTTCACAAAGCCATCAACTTGCAAATCAACCTTTATGTCCACTCTCTGTTCTCTAATAAAATATTTTCTCCATATGTTAAACCATGATACAGGTCAGACATTAATTTTGGCCCTTTTTCATTTTGCATCTTCTGATTTTGATACAAAAATTACTTGAAAGGATTGATTGAACTTGAATGATTCCCTATCCGAACATGAAAGTGATTTGTTCATTTACATGTATACCTTCTTTTGAAAGAATGGGTCAAGTCGTGTCTTAGAGAAGTACCAAGAAACAAAAGGTAGTTTCAATCACCTTCACCTTCCTCATGAGTGCTACCTGCTTTTGATACGACATCACGAACCCATATTTTACGACATGAATAAAGAAAACCAAGGTGATTTTTTGCAACATCTAGAATGAAATGGTTAAGTGGAAGAACCAAGAGAGAAGCCAAGAGAGTTGTGATATGTGGAGAGAGAGGCAATATGTATTACCAATTGATTGATAAAGAATTCTGTTGGCTTGCATCTTTCATATGAATTTTGTGGAGTCGCAAGAACTTGTGTA

mRNA sequence

AGAGATGCCTCAGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGTGACATTCAAGCTTGTCTCTCCAAAAATAACTTTCTTCCTCACAAGTGCGTCAGGGTTATTCAACTATTGCAGTATTGCTGTGAAAACTGCAATTACAAGTCAACACACTGTGCTTCTGTTTCTGACCTCTTAAAGCAAATGCCAAAGCCGAAAGGCCAGAAATCTTGATCCAAGTCGAGCCAGATGTAATTCAGTCTAGACGTGACAAACTAAATTAGGTGTTTACTTATAACTCAAGCCAACATATTATGGGATGGCACAGCCAATGCTGGACGCTGAATTCTGCTAGTTTTGCAAAATAGTGCAGATGGAAGAGATGAGGCCAGAAAACCAAAATCTTTGATAGATCAACATGAACTAATGCTAATGATGTTACCATTTCTTCACAAAGCCATCAACTTGCAAATCAACCTTTATGTCCACTCTCTGTTCTCTAATAAAATATTTTCTCCATATGTTAAACCATGATACAGGTCAGACATTAATTTTGGCCCTTTTTCATTTTGCATCTTCTGATTTTGATACAAAAATTACTTGAAAGGATTGATTGAACTTGAATGATTCCCTATCCGAACATGAAAGTGATTTGTTCATTTACATGTATACCTTCTTTTGAAAGAATGGGTCAAGTCGTGTCTTAGAGAAGTACCAAGAAACAAAAGGTAGTTTCAATCACCTTCACCTTCCTCATGAGTGCTACCTGCTTTTGATACGACATCACGAACCCATATTTTACGACATGAATAAAGAAAACCAAGGTGATTTTTTGCAACATCTAGAATGAAATGGTTAAGTGGAAGAACCAAGAGAGAAGCCAAGAGAGTTGTGATATGTGGAGAGAGAGGCAATATGTATTACCAATTGATTGATAAAGAATTCTGTTGGCTTGCATCTTTCATATGAATTTTGTGGAGTCGCAAGAACTTGTGTA

Coding sequence (CDS)

ATGCCTCAGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGTGACATTCAAGCTTGTCTCTCCAAAAATAACTTTCTTCCTCACAAGTGCGTCAGGGTTATTCAACTATTGCAGTATTGCTGTGAAAACTGCAATTACAAGTCAACACACTGTGCTTCTGTTTCTGACCTCTTAAAGCAAATGCCAAAGCCGAAAGGCCAGAAATCTTGA

Protein sequence

MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQMPKPKGQKS

Homology

[Close]

BLAST of Carg13196 vs. NCBI nr
Match: XP_022942264.1 (cx9C motif-containing protein 4 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 6.7e-34
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60

Query: 61 MPKPKGQKS 70
          MPKPKGQKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of Carg13196 vs. NCBI nr
Match: XP_022983557.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 6.7e-34
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 15 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 74

Query: 61 MPKPKGQKS 70
          MPKPKGQKS
Sbjct: 75 MPKPKGQKS 83

[Close]

BLAST of Carg13196 vs. NCBI nr
Match: XP_023539532.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 6.7e-34
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ
Sbjct: 13 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 72

Query: 61 MPKPKGQKS 70
          MPKPKGQKS
Sbjct: 73 MPKPKGQKS 81

[Close]

BLAST of Carg13196 vs. NCBI nr
Match: XP_022136460.1 (cx9C motif-containing protein 4 [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 5.7e-33
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCV+VIQLLQYCCENC+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVKVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKGQKS 70
          MPKPKGQKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of Carg13196 vs. NCBI nr
Match: XP_008456041.1 (PREDICTED: cx9C motif-containing protein 4 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-28
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQ CCE+C+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKGQKS 70
          + KPK QKS
Sbjct: 61 I-KPKSQKS 68

[Close]

BLAST of Carg13196 vs. TAIR10
Match: AT1G09794.1 (Cox19 family protein (CHCH motif))

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-24
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKKEACDIQACLSKNNFLP +C RVI++LQ CCE CN +STHC SV+ LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLSKNNFLPQRCQRVIEMLQACCERCNNESTHCGSVAALLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 IKK 63

[Close]

BLAST of Carg13196 vs. Swiss-Prot
Match: sp|Q61908|CMC4_MOUSE (Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN+L  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYLESKCQAVIQELRKCC 39

[Close]

BLAST of Carg13196 vs. Swiss-Prot
Match: sp|Q0VBY0|CMC4_BOVIN (Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN++  KC  VI+ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYMESKCQAVIEELRKCC 39

[Close]

BLAST of Carg13196 vs. Swiss-Prot
Match: sp|P56277|CMC4_HUMAN (Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  N+++  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCC 39

[Close]

BLAST of Carg13196 vs. Swiss-Prot
Match: sp|B5RTE0|CMC4_DEBHA (Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.6e-05
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 7  EPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC-----ENCNYKSTHCASVSDLLK 60
          +PCK EAC IQ CL +NN+   KC ++I  L  CC     +N + K T C    +LL+
Sbjct: 9  DPCKPEACAIQDCLQQNNYNESKCSKIIDNLYLCCKKYYEKNGSDKQTTCCPKFNLLQ 66

[Close]

BLAST of Carg13196 vs. TrEMBL
Match: tr|A0A1S3C3J8|A0A1S3C3J8_CUCME (cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQ CCE+C+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKGQKS 70
          + KPK QKS
Sbjct: 61 I-KPKSQKS 68

[Close]

BLAST of Carg13196 vs. TrEMBL
Match: tr|A0A0A0LC41|A0A0A0LC41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-27
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENC+YKSTHCASVS LLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 MPKPKGQKS 70
          + KPKGQKS
Sbjct: 61 I-KPKGQKS 68

[Close]

BLAST of Carg13196 vs. TrEMBL
Match: tr|A0A2G9HCV0|A0A2G9HCV0_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12000 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-24
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKK+ACDIQACLSKNNFLP KCV+VIQLLQYCCE C YKSTHCASVS LLKQ
Sbjct: 1  MAQPSKEPCKKQACDIQACLSKNNFLPQKCVKVIQLLQYCCEQCEYKSTHCASVSSLLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 INK 63

[Close]

BLAST of Carg13196 vs. TrEMBL
Match: tr|A0A2I4FV81|A0A2I4FV81_9ROSI (cx9C motif-containing protein 4 OS=Juglans regia OX=51240 GN=LOC109002325 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.1e-24
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACL+KNNF+P +C++VI+LLQ CCE C+YKSTHCASVS LLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLTKNNFIPQRCLKVIELLQSCCEKCDYKSTHCASVSGLLKQ 60

Query: 61 MPK 64
           PK
Sbjct: 61 KPK 63

[Close]

BLAST of Carg13196 vs. TrEMBL
Match: tr|D7TGV7|D7TGV7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0035g00710 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.0e-23
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP+ SKEPCKKEACDIQACLSKNNFLP KC RVI+LLQ CCE C Y STHC SVSDLLKQ
Sbjct: 1  MPKQSKEPCKKEACDIQACLSKNNFLPQKCRRVIELLQSCCEKCEYNSTHCGSVSDLLKQ 60

Query: 61 MPK 64
           PK
Sbjct: 61 KPK 63

The following BLAST results are available for this feature:

BLAST of Carg13196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942264.1	6.7e-34	100.00	cx9C motif-containing protein 4 [Cucurbita moschata]	[more]
XP_022983557.1	6.7e-34	100.00	cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima]	[more]
XP_023539532.1	6.7e-34	100.00	cx9C motif-containing protein 4, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022136460.1	5.7e-33	97.10	cx9C motif-containing protein 4 [Momordica charantia]	[more]
XP_008456041.1	1.9e-28	91.30	PREDICTED: cx9C motif-containing protein 4 [Cucumis melo]	[more]

BLAST of Carg13196 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09794.1	2.6e-24	76.19	Cox19 family protein (CHCH motif)	[more]

BLAST of Carg13196 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q61908\|CMC4_MOUSE	4.8e-07	57.89	Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1	[more]
sp\|Q0VBY0\|CMC4_BOVIN	1.8e-06	52.63	Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1	[more]
sp\|P56277\|CMC4_HUMAN	3.1e-06	52.63	Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1	[more]
sp\|B5RTE0\|CMC4_DEBHA	2.6e-05	41.38	Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ...	[more]

BLAST of Carg13196 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3J8\|A0A1S3C3J8_CUCME	1.3e-28	91.30	cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=4 SV=...	[more]
tr\|A0A0A0LC41\|A0A0A0LC41_CUCSA	1.1e-27	88.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=4 SV=1	[more]
tr\|A0A2G9HCV0\|A0A2G9HCV0_9LAMI	1.9e-24	85.71	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12000 P...	[more]
tr\|A0A2I4FV81\|A0A2I4FV81_9ROSI	7.1e-24	80.95	cx9C motif-containing protein 4 OS=Juglans regia OX=51240 GN=LOC109002325 PE=4 S...	[more]
tr\|D7TGV7\|D7TGV7_VITVI	6.0e-23	82.54	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0035g00710 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009069	Cys_alpha_HP_mot_SF
IPR027179	MTCP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13196-RA	Carg13196-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.287.1130		coord: 3..67 e-value: 9.2E-17 score: 62.7
IPR027179	Mature-T-Cell Proliferation I type	PFAM	PF08991	MTCP1	coord: 8..61 e-value: 8.1E-14 score: 51.5
IPR027179	Mature-T-Cell Proliferation I type	PANTHER	PTHR15590	FAMILY NOT NAMED	coord: 3..61
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	SSF47072	Cysteine alpha-hairpin motif	coord: 4..63

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13196	Cla004305	Watermelon (97103) v1	carwmB0048
Carg13196	Csa3G228340	Cucumber (Chinese Long) v2	carcuB0043
Carg13196	CSPI03G19190	Wild cucumber (PI 183967)	carcpiB0047
Carg13196	Cucsa.032830	Cucumber (Gy14) v1	carcgyB0048
Carg13196	CmaCh04G005440	Cucurbita maxima (Rimu)	carcmaB0055
Carg13196	CmoCh04G005780	Cucurbita moschata (Rifu)	carcmoB0058
Carg13196	Lsi05G001540	Bottle gourd (USVL1VR-Ls)	carlsiB039
Carg13196	Cp4.1LG01g01720	Cucurbita pepo (Zucchini)	carcpeB0061
Carg13196	CsGy3G019140	Cucumber (Gy14) v2	carcgybB0043
Carg13196	MELO3C031671.2	Melon (DHL92) v3.6.1	carmedB0042
Carg13196	CsaV3_3G019300	Cucumber (Chinese Long) v3	carcucB0048
Carg13196	Cla97C05G091780	Watermelon (97103) v2	carwmbB0042
Carg13196	Bhi01G001184	Wax gourd	carwgoB0050

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13196	Carg11321	Silver-seed gourd	carcarB051

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13196	Cucurbita maxima (Rimu)	carcmaB0053
Carg13196	Cucurbita moschata (Rifu)	carcmoB0055
Carg13196	Cucurbita pepo (Zucchini)	carcpeB0059
Carg13196	Melon (DHL92) v3.5.1	carmeB0041
Carg13196	Watermelon (Charleston Gray)	carwcgB0045