Csa3G228340 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G228340
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Cx9C motif-containing protein 4; contains IPR009069 (Cysteine alpha-hairpin motif superfamily)
Location	Chr3 : 14877696 .. 14881647 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCGCCGATCAAAGAACCCTGCAAGAAGGAAGCGTGCGATATTCAAGCTTGTCTTACCAAAAACAACTTTCTTCCCCACAAGTATGTTTTCTTTTTACATTTCTCTTTCCATTTCGTTTCCGCAGCAATCTCCCATGATAGAATAGAATCTCAAGTTTGATGTTGTTCGATTGAGTCATTTGCATGAATCGGTGGGTAGAAGGGTCTAATAATTCCAATACTTTTTTTTTCACTTTCTTTGTGTTCCTGTATCTATAAACGAAACTCTGGACTGCTATATATCCTTTATGTTTTGTGCTTCGTTTTTCTTTGTTGTTCTATCCTTTGATCTCCCTTTGCGTTATGTGCGATCAAACAAAAATTTAATTAAGTAATGAAACAGGGGAACTTTTCGGTTTAATTCTTCGATGTTGCAACCATTTGGGCTTTTAGTTTTGATCCGTTTTCTGCCCTCTTCATGTTTGGTTCATTGACCGACGTAGTTACACCAAGTAGTGTAATCCTTGATTTGGGTTTTTCCGACAGCTTATTGAGGTCTGTATCCGTTCGTAAGAATTTTGTATAATTTTGTGTTGCTTTTTGTTCACTTCTAAAATTGAGATGCGTTTTGATGTACTTCCAAAAAATCAAGCTTATTTGCCACGTTCCGAAGATCAAGCTTCTTCTTTCTTGCCGCAGTAGGTTGGTCAGTCCTCCGGAATGATGTTTTCATGATTATAAGTGGAAGAAATATTTTCTATGAATTATTTAATTCTCATCTAAACCGTGAATGTTCTACTTCTACTCTGTCTTTCGCCTCTTCCATGAGTTCATGATAATCCCCAGCTTGCAAAATTTGTAGACTCTTCTCAGGTGTACAAATGAATTTAGTCCAAGGTTTAAAATAAAATGAAATATGGACTTCTCCTAAATTACCCATTCGATCCTAAAACTCACACGATGGTCTGCTGCTCGAAATTGCTCTTCTGCCTTTTTCTAGCGTTTCATCCCTTGCTCATCACTTCGTCTGACAATGTTGTTCCGTTTTAAATGAATCTTAAACTCGCTTCTTCCTCTCATTCCATCCTCTCACTTCTTCCTTTCGTTCCTCGTCCAACACATCTCTTCTGGCTAGTTTTTTGGTAATTAATGCTCGTTGTACGAAATTTTGATCTAATGCAAAAAAATCCTCACTAAGTCCTACAATCATTTTAAATCAATTTGAAGAAAGGATTTCGCAAGCTAGACTTTTGTAAGATAAAGAGCGCAACATAAAATGTAAAAAACCCCTAACTTTTCAGTTACAAAGTATCCCAAAATATAAACTATGAAGGTTGTTGAATCGTCGTAGACAACCAGTTTCACACGCTAAGTAAATGTACACTAGTGTGTTTGTTTCTTATTGGTTACGTTTTTTGATAGAATCATTGTTTACATTGCGAGATTGTTTCACATAACCAACATAAAACGGTGGAATGTCTGTGAGATGTTATTATGAGCACGAGCTAGTATCTCAGAATGACAAGAGAGATGCGAGAGCAAGAAACGAGATGAGATTTTTGAACATGTGCCCAATGAGAGACGAGAGGAAGAAAGACAGAGCTAGAGTTTAACAAAATTGTAATTTTTTAATTCTTTTTCTTTTGTGTGTGTGTGTATTATTGTTTGAAGGATGGACAAGAAGCAGCTATTCATTCAATGGGATGACAAAAAATAATCCTATTAAGGAGGTCGTTTGAAGGGTATTGTCGTGCCGAGCATAGTGAATTGAGAGATCAGCTGTATGAACTTACAAAAGTTAGTTCTTTGGAGTTCAACATCATGGTGACAGTGAAATATAAGTTGGATGATGAATCTTCTCCAGTGTGACGATGATGTTAGATTTCTCATATTTGAGCTAGATTTTAATAGAAGGTCGATATTCATAAGTGTTGAGAAAATCCTTCAAGAGACAACTTTCAGTGACACAGAGATAAAACTTGAACCCATTTGAAGTGGTTAAGTGTTGTTAGATGAGGAACGAGAGGAAGAGATAAGGTGTGAGGGGAAGGAACAAAGTGATTTTGGGCGGCAGGCCATCTTTGAGTTTCTAGGTCGAATGGGTAATTTCACATGCGACTGATGTACGCAAAAAAACCATTTTCCATATTTGATTTTAACTCTTAGGTCAAATTTCATTTGGGTTCTAAAATGAGGACATTCGTACAAATTCTTGCCGAATTTCTACATTTTCAGTTATTCTAGTTTTTTATTTGGGTACCAACGGTTAGTTTGCTTGATTTTCCTTTTATCATTCCCTGCTAGAGGAATGGGAATTTACTGAAGTTCGATTTCTATTTTCCACAAACTGTCTTCAATTTCGACTTCTATTACTCTATCTTGCCAATGATAGTGTAGTCTGCGACTCTGCGCATTAACCTTCTCCTTTTTTCCTCCTCATTTCTTATTTTATTTCTCTTTATTGTTATCTCTTGGTAGTTTCTTCTGGCTAGAGGTGTAAATTTGGTGCATTTCTGCTGGAAGGTTGTTCAAAATATATGTCGATGAACCAAATTCTTTGATAATTAAATTTTTGTTCATAGTTTTGAAGCCACTGGCATTGGCCACACATTTGGCAGGTTTATACCCAGTAGATGTTGAAGTCTGTTCTTTCTTATGTTGTATGCATGTAGTGTCTGTTGTAGTACCATCATTAATACCTGATGAGTAAGAAATTGGATTTGGATTCAATATATGCTGAAGGATGTGGTTCTTGGAAACTTGCCTTCTGCCCTAATTCAGGAGAAATGTCTTAATCTTCAAATTGCTAATCAACAAAAAGTTATGGGCATTATCTATATTAACAATTTTGTTGGAAAAGAAAACTATCCACCTGGAGGATAGAGTGTAATCCATCCCCATGTCCAAAAGAGCCAACTAGGTACACAGAAGCAACAGCTCGAATTCATTATTCTGGGTTATGTAGATAATGGGATGAGAGCCTGGGACGTTCTAACCTTCTGAGAACAAGAAGAGGACCAGCTAAGGAAGTTGATTTTCTTTGGCATTTGTTAAGAAGTCTCAAATGGGTGATGGTGCTGCTTAAACTCTCAAAAGATATGCAAATAAAGAATCCAAGAGGTCCGGGGTTGATCCACCTCTTTGTTCTGCTTTGTTGTAGCTGCGGCGAACTGGGGATTGGTTATAGCTCTCCATTCATCTCTCTTCCCTTACTCAAATTTCGTTCCATTTTCAGTTGGAGAAAATGGATAAACAAGCTGGTTTGCACTAGAGATAAATAGCCCTTCACGTTGCAATCCTACTACATTACACGTCTTGTAATAATGTTGAAGTTTAATGTCACTATGATGTGGTCAATGCTGTTATACATGTGGATATTATCGTGCTGTTGAAACTTTCTAGGAAGTATAAGTCCTAATTCTTCCCGTTGTATTTTCTCCCTTCAGGAATGTTACAACACATATTTACTGAAGAGTAGGATTGCCTCAATAAGGCGCCTTAACGTCTGAATAAGATGACTTAACGTCTTGAGTCATTTCAATGTAGACTTGCCAAGGGTCATAATTGGTTAAACAACCTACTCCAACCTAGGTGGAATTGGTTTTTTTTTTCTTTTCTTTTTCCCTCCTATCAATGCGATTATTTGTTTATGCTCTCATTTGTTTGGGAAATGGGTGCTCGGCATAATGTAGTATGCATTGTGCCAGTGCCCATGTTTCCTGGATTTGGTTGTGCAGACAAATATCAGTTAGATGCTCGTAACACTTCTGTTTGTGTGATGGGGAAGGCTTTTGCTGAAACCAAATTGATATGTTCCTAATCAATTTGTTCATTGACATGGTTGTAGGTGCGTCAGGGTCATTCAACTATTGCAACATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGGCCTCTTAAAGCAAATAAAGCCAAAAGGCCAGAAATCTTGA

mRNA sequence

ATGCCTCCGCCGATCAAAGAACCCTGCAAGAAGGAAGCGTGCGATATTCAAGCTTGTCTTACCAAAAACAACTTTCTTCCCCACAAGTGCGTCAGGGTCATTCAACTATTGCAACATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGGCCTCTTAAAGCAAATAAAGCCAAAAGGCCAGAAATCTTGA

Coding sequence (CDS)

ATGCCTCCGCCGATCAAAGAACCCTGCAAGAAGGAAGCGTGCGATATTCAAGCTTGTCTTACCAAAAACAACTTTCTTCCCCACAAGTGCGTCAGGGTCATTCAACTATTGCAACATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGGCCTCTTAAAGCAAATAAAGCCAAAAGGCCAGAAATCTTGA

Protein sequence

MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKPKGQKS*

Homology

[Close]

BLAST of Csa3G228340 vs. Swiss-Prot
Match: CMC4_MOUSE (Cx9C motif-containing protein 4 OS=Mus musculus GN=Cmc4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-07
Identity = 27/61 (44.26%), Postives = 33/61 (54.10%), Query Frame = 1


Query: 4  PIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKP 63
          P K+PC+K+AC+IQ CL  NN+L  KC  VIQ L+ CC    Y        SG  K+ + 
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYLESKCQAVIQELRKCCAR--YPKGRSLVCSGFEKEEEE 60

Query: 64 K 65
          K
Sbjct: 62 K 60

[Close]

BLAST of Csa3G228340 vs. Swiss-Prot
Match: CMC4_BOVIN (Cx9C motif-containing protein 4 OS=Bos taurus GN=CMC4 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 1


Query: 4  PIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKP 63
          P K+PC+K+AC+IQ CL  NN++  KC  VI+ L+ CC    Y        SG  K+ + 
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYMESKCQAVIEELRKCCAR--YPKGRSLICSGFEKEEEE 60

Query: 64 K 65
          K
Sbjct: 62 K 60

[Close]

BLAST of Csa3G228340 vs. Swiss-Prot
Match: CMC4_HUMAN (Cx9C motif-containing protein 4 OS=Homo sapiens GN=CMC4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-06
Identity = 24/57 (42.11%), Postives = 31/57 (54.39%), Query Frame = 1


Query: 4  PIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 61
          P K+PC+K+AC+IQ CL  N+++  KC  VIQ L+ CC    Y        SG  K+
Sbjct: 2  PQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCC--AQYPKGRSVVCSGFEKE 56

[Close]

BLAST of Csa3G228340 vs. TrEMBL
Match: A0A0A0LC41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G228340 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.4e-34
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 IKPKGQKS 69
          IKPKGQKS
Sbjct: 61 IKPKGQKS 68

[Close]

BLAST of Csa3G228340 vs. TrEMBL
Match: A0A068TNJ3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014895001 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-22
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKK+ACDIQACLTK+NF P +CVRVI+LLQ CCE C YKSTHCASVSGLLKQ
Sbjct: 1  MPEPSKEPCKKQACDIQACLTKSNFNPQRCVRVIELLQACCEECKYKSTHCASVSGLLKQ 60

Query: 61 IK 63
          I+
Sbjct: 61 IR 62

[Close]

BLAST of Csa3G228340 vs. TrEMBL
Match: A0A059AUJ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02752 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.2e-22
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKKEACDIQACLTKNNF+P KC+R I+ LQ CCE+C+YKSTHCASVSGLLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLTKNNFIPQKCLRFIEALQSCCEHCEYKSTHCASVSGLLKQ 60

Query: 61 IKPKGQ 67
           KPK +
Sbjct: 61 -KPKSK 65

[Close]

BLAST of Csa3G228340 vs. TrEMBL
Match: A0A022QEZ0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017584mg PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.8e-22
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKK+ACDIQ+CL+KNNFLP KC++VIQLLQ CCE C+YKSTHC SVSGLLKQ
Sbjct: 1  MAQPSKEPCKKQACDIQSCLSKNNFLPQKCIKVIQLLQFCCEQCEYKSTHCGSVSGLLKQ 60

Query: 61 I 62
          I
Sbjct: 61 I 61

[Close]

BLAST of Csa3G228340 vs. TrEMBL
Match: A0A0V0GZ71_SOLCH (Putative cx9C motif-containing protein 4-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.0e-21
Identity = 45/59 (76.27%), Postives = 55/59 (93.22%), Query Frame = 1


Query: 6  KEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKPK 65
          KEPCKK+ACDIQACL+KNNFLP +CV+VI+ L++CCE C+YKSTHCAS+SGLLKQI+ K
Sbjct: 6  KEPCKKQACDIQACLSKNNFLPQRCVKVIEALKYCCEQCEYKSTHCASLSGLLKQIQKK 64

[Close]

BLAST of Csa3G228340 vs. TAIR10
Match: AT1G09794.1 (AT1G09794.1 Cox19 family protein (CHCH motif))

HSP 1 Score: 103.2 bits (256), Expect = 6.5e-23
Identity = 45/62 (72.58%), Postives = 50/62 (80.65%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKKEACDIQACL+KNNFLP +C RVI++LQ CCE C+ +STHC SV+ LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLSKNNFLPQRCQRVIEMLQACCERCNNESTHCGSVAALLKQ 60

Query: 61 IK 63
          IK
Sbjct: 61 IK 62

[Close]

BLAST of Csa3G228340 vs. NCBI nr
Match: gi|449457033|ref|XP_004146253.1| (PREDICTED: cx9C motif-containing protein 4 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-34
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 IKPKGQKS 69
          IKPKGQKS
Sbjct: 61 IKPKGQKS 68

[Close]

BLAST of Csa3G228340 vs. NCBI nr
Match: gi|659112052|ref|XP_008456041.1| (PREDICTED: cx9C motif-containing protein 4 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 9.7e-29
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ CCE+CDYKSTHCASVS LLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 IKPKGQKS 69
          IKPK QKS
Sbjct: 61 IKPKSQKS 68

[Close]

BLAST of Csa3G228340 vs. NCBI nr
Match: gi|747080868|ref|XP_011087700.1| (PREDICTED: cx9C motif-containing protein 4 [Sesamum indicum])

HSP 1 Score: 114.8 bits (286), Expect = 6.1e-23
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKK+ACDIQACL+KNNFLP KCV+VIQLLQ CCE C+YKSTHCASVSGLLKQ
Sbjct: 1  MGQPSKEPCKKQACDIQACLSKNNFLPQKCVKVIQLLQSCCEQCEYKSTHCASVSGLLKQ 60

Query: 61 I 62
          I
Sbjct: 61 I 61

[Close]

BLAST of Csa3G228340 vs. NCBI nr
Match: gi|702469054|ref|XP_010030143.1| (PREDICTED: cx9C motif-containing protein 4 [Eucalyptus grandis])

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-22
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKKEACDIQACLTKNNF+P KC+R I+ LQ CCE+C+YKSTHCASVSGLLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLTKNNFIPQKCLRFIEALQSCCEHCEYKSTHCASVSGLLKQ 60

Query: 61 IKPKGQ 67
           KPK +
Sbjct: 61 -KPKSK 65

[Close]

BLAST of Csa3G228340 vs. NCBI nr
Match: gi|661899530|emb|CDO97524.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-22
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKK+ACDIQACLTK+NF P +CVRVI+LLQ CCE C YKSTHCASVSGLLKQ
Sbjct: 1  MPEPSKEPCKKQACDIQACLTKSNFNPQRCVRVIELLQACCEECKYKSTHCASVSGLLKQ 60

Query: 61 IK 63
          I+
Sbjct: 61 IR 62

The following BLAST results are available for this feature:

BLAST of Csa3G228340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CMC4_MOUSE	4.7e-07	44.26	Cx9C motif-containing protein 4 OS=Mus musculus GN=Cmc4 PE=2 SV=1	[more]
CMC4_BOVIN	1.8e-06	40.98	Cx9C motif-containing protein 4 OS=Bos taurus GN=CMC4 PE=3 SV=1	[more]
CMC4_HUMAN	3.0e-06	42.11	Cx9C motif-containing protein 4 OS=Homo sapiens GN=CMC4 PE=1 SV=1	[more]

BLAST of Csa3G228340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC41_CUCSA	2.4e-34	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G228340 PE=4 SV=1	[more]
A0A068TNJ3_COFCA	1.2e-22	80.65	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014895001 PE=4 SV=1	[more]
A0A059AUJ6_EUCGR	1.2e-22	77.27	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02752 PE=4 SV=1	[more]
A0A022QEZ0_ERYGU	2.8e-22	78.69	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017584mg PE=4 SV=1	[more]
A0A0V0GZ71_SOLCH	4.0e-21	76.27	Putative cx9C motif-containing protein 4-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of Csa3G228340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09794.1	6.5e-23	72.58	Cox19 family protein (CHCH motif)	[more]

BLAST of Csa3G228340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457033\|ref\|XP_004146253.1\|	3.5e-34	100.00	PREDICTED: cx9C motif-containing protein 4 [Cucumis sativus]	[more]
gi\|659112052\|ref\|XP_008456041.1\|	9.7e-29	89.71	PREDICTED: cx9C motif-containing protein 4 [Cucumis melo]	[more]
gi\|747080868\|ref\|XP_011087700.1\|	6.1e-23	83.61	PREDICTED: cx9C motif-containing protein 4 [Sesamum indicum]	[more]
gi\|702469054\|ref\|XP_010030143.1\|	1.8e-22	77.27	PREDICTED: cx9C motif-containing protein 4 [Eucalyptus grandis]	[more]
gi\|661899530\|emb\|CDO97524.1\|	1.8e-22	80.65	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009069	Cys_alpha_HP_mot_SF
IPR027179	MTCP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU095246	cucumber EST collection version 3.0	transcribed_cluster
CU169612	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G228340.1	Csa3G228340.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU169612	CU169612	transcribed_cluster
CU095246	CU095246	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009069	Cysteine alpha-hairpin motif superfamily	GENE3D	G3DSA:1.10.810.10		coord: 6..62 score: 2.7
IPR009069	Cysteine alpha-hairpin motif superfamily	unknown	SSF47072	Cysteine alpha-hairpin motif	coord: 5..62 score: 5.23
IPR027179	Mature-T-Cell Proliferation I type	PFAM	PF08991	MTCP1	coord: 8..60 score: 1.1
None	No IPR available	PANTHER	PTHR15590	FAMILY NOT NAMED	coord: 1..62 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G228340	Cla004305	Watermelon (97103) v1	cuwmB243
Csa3G228340	Lsi05G001540	Bottle gourd (USVL1VR-Ls)	culsiB211
Csa3G228340	MELO3C031671.2	Melon (DHL92) v3.6.1	cumedB238
Csa3G228340	Cla97C05G091780	Watermelon (97103) v2	cuwmbB215
Csa3G228340	Bhi01G001184	Wax gourd	cuwgoB283
Csa3G228340	CSPI03G19190	Wild cucumber (PI 183967)	cpicuB120
Csa3G228340	Cucsa.032830	Cucumber (Gy14) v1	cgycuB003
Csa3G228340	CmaCh04G005440	Cucurbita maxima (Rimu)	cmacuB697
Csa3G228340	CmoCh04G005780	Cucurbita moschata (Rifu)	cmocuB687
Csa3G228340	Cp4.1LG01g01720	Cucurbita pepo (Zucchini)	cpecuB389
Csa3G228340	CsGy3G019140	Cucumber (Gy14) v2	cgybcuB109
Csa3G228340	Carg13196	Silver-seed gourd	carcuB0043

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G228340	Cucurbita maxima (Rimu)	cmacuB320
Csa3G228340	Cucurbita moschata (Rifu)	cmocuB307
Csa3G228340	Melon (DHL92) v3.5.1	cumeB166
Csa3G228340	Watermelon (Charleston Gray)	cuwcgB230
Csa3G228340	Cucurbita pepo (Zucchini)	cpecuB205
Csa3G228340	Silver-seed gourd	carcuB0675