CmoCh04G005780 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G005780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cx9C motif-containing protein 4
Location	Cmo_Chr04 : 2884212 .. 2887870 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTGTAGCCAACGGGTTGAATGTCTCGAGCGCAATTGGGTGATTTGCCTTCGTTTCAATCACTATTGATCCCCAATTTTTCTACAATATTGATGGCTTGATGTGGCATCTCATGCCAAGGTAGAGATTGTCTTTACCTATACGACCAATATATGAGGTTCCATATCTGTTGGAGAGGGTAACAAGTCATTGCTTATAAATGTGTAGAATTCTCTCTCTAGTAGACTCGTTTTAAAAACCTTTGAGGAGAAACCCATAAGGGAAAGCCTAGAAAGGACAAATATTTTGTAACGGTGGGCTTGGGTTGTTACAATCCACGGTTTATTCTCATTTTTGTATGTGCGAGCTAAAGTTCTAGCCTCTAGAAACTCTCGATATCCTTCGTTTTCTATGTCTTGGTCAATGGAACTTGGATGACATCTCTCCCTTTGTGCAAGGTTCAAGCCCACCCGACGGTGCTATTTACCTTATCCCAACATAATGACGAGTCATTTTTGGTTCTTTTACTTTCCGTTGTTGATTTTCTACTCCTAAATAGCTATTATCTTTGGGTCATGTCACCCGTTGGGTAACATATTTGAACAAACAATTTTTTTTTTTTTTTTGTTAAAAGGCATTTGCATTCCCCTAGAGGGTGTTCAGTGGTTGAATCCAGTCGAGCCGAAACATTTTTCTAGACCTAACTCAGTTGTTCGGGTTCTAAATTTTTTAATATTAAATTGGGCAAGGTAGTTTAGGTCATTTATTTAAAATTTTATTTTTAATAAAAGAAAAATGCTAATATATAAAATTTTCATCCAACTTAATCTAAATATGGTGAACACGTTTAAACAGTACGAATTATATATATAATGATTTGATGAACATAGCGATTCGAATTGAACATCGCGTCGAGAGAGATGCCTCAGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGTGACATTCAAGCTTGTCTCTCCAAAAATAACTTTCTTCCTCACAAGTAAGTTTAGATTAAGATTTTCCTTTTGTGTTTGTTTCGCGAGGAATCTCCGATGAAAGATTCTCAAGTTTCTAGGCTGTTCTGTTCATCGATGTTTGATCTTGTTCGTTTTAGTGATTTGCATGAATCAGAGGATAGATGGATTGAATTTGAATTTTATTTCTTTCTTTGTTTTCCTGTATCTGTTGACGAAACTGTGGACTGCTGTATATTCTTTGTGCTTTGCGTTTTTTCTTCCGTTTGAATTATCAGTTATCTCCGTCTGTCGTGAGATCAAGCAAAGAACGAATTAAGCTATAAAGCAGAAATGCGTTTTAATTTGATTCCTCTGTATGGAAAACGTTTGGGCTTTTACTTTTCCCTATGTTTGATCCGTTTCATTTCTCTTCGTGTTTGGTTCATCGACTCACGCACTTAGACCAAGTATTGTAGTCCTTGATTTGGGAAATTTCGAATAGATTACGGAGGTCTGTGTCTGTGCCTAAGAAATTTGTAGAATGTCAGACACCATAAAACATGTCGTTCTTCTTCAAAATTTTGTCAGTAGTTTCTATATGCGATCAAAATTCTGCTGGAAGGTTGTTCAAAATGTGGAAATTCAATAGTTTAGTTCAAATTTTGAGTCCACTGGAATTGATCATACATTTGACAGGCATTATGTCGAATGGATGTTGAAGTTTGTTTATTTTTATGTGTGTGTGTGTACAGCTGTATACTGTATACATAAGGTGTCTGTTGTAGTTCTATGATTATCTTCTGATCAGCAAGTAGCTGGATTTTGTTTTAGTAACGATGTGATTCTTGGAAAACTTGCTGTCCTGATTCAGGAAAAATGTTGTTTTAAACTCAAATTGCTGATCCACAAACAGAATTCCACATCAAGTTTATGCATTTCTCTTCGGAACACTTCATAGAACGCATGCCTAGGATATCAACCCCATTTCCAAAAAAGCCAATTTGATAGATTCATCAATAACCTCGGAGGTTCCAGCTTTCAAGCCCTTGAATCCAACTTCCCTCGGACTGGTCTCAAGTCCCTATGAAGTTTCAATATATTGGGATGTCTCCTAAACTTTTATTCATTGAATATGTCACTTCGATTGAAGAGTAATGGAGGCTAAGGTATTCTGCTGCTTGGCTACAGCTTCTGCTTGGGGAACCTAGAAGCTAGGTTGCAGCTCTCCATTCAATTTCCCAAAATGGTATTTTAACCTTTGAGATGTCATTTGGGATCCTGGTTCGAAATCAAGAACCTTGGGATTTTGGAACCCATGGGATTGATTGGTTGTATTCCTGAAGCTTGGGGTGCAGGGTTGGGTTGGTTGGGTTTTTGAAACTTGTGTTTGAGGTGTAGGGTTGAGTTGGACTAGGTTCCAATAGCCAGTTTTTTTGGGATGTTCTTTAGTTTCCATTTTTTGTGACTTGATAATTTGTTCTGAACTATATATCAATATTCTGTCCCAATTTGTGTAATTTGGCTCAGCCATATTCAAATTATACTACGTGCATCTTTTGTAACCAATCTATGTCTCTCACTTCATACATGGTGATATCATTTTCAATATCACCATCTTAAATGTAGAATGAATAACTCTAAAAGTAGGAAGGATATATTAAAAAATCCATGGTTAAAGCTCGGGTTTTTTAGTCTTTTGTTTTTTCGTTTTCTGTGAATTGTTCTTTGATATAATCTTGCTGAATTTTTGGACAATCTACTAGAAAACAATTGTTCCATCCATCCAAACCAATGGATCAAACGGCCGCTCATTTGTTTTCCTCCTCTGCTGTGGATTAGCAATTTAGGCCAGTTTAATTCTATATTCCCTGGAATCGGGCGACAAATACCAACTCTTAGATGACTCATTACACTTCTCTTAGATGTTGATGACTTTTTTTTTGTGTGTTATGGGTGAAGGCTTTTGCATGTAGGTAAGTTGATGTGTCCCTGATAAGTGTGTGGATTGACATGGTTGTAGGTGCGTCAGGGTTATTCAACTATTGCAGTATTGCTGTGAAAACTGCAATTACAAGTCAACACACTGTGCTTCTGTTTCTGACCTCTTAAAGCAAATGCCAAAGCCGAAAGGCCAGAAATCTTGATCCAAGTCGAGCCAGATGTAATTCAGTCTAGACGTGACAAACTAAATTAGGTGTTTACTTATAACTCAAGCCAACATATTATGGGATGGCACAGCCAATGCTGGACGCTGAATTCTGCTAGTTTTGCAAAATAGTGCAGATGGAAGAGATGAGGCCAGAAAACCAAAATCTTTGATAGATCAACATGAACTAATGCTAATGATGTTACCATTTCTTCACAAAGCCATCAACTTGCAAATCAACCTTTGTGTCCACTCTCTGTTCTCTAATAAAATATTTCTCCATACGTTTAACTATGATACAGGTCAGACATTAATTTTGGCCCTTCTTCATTTTGCATCTTCCGATTTTGATACAAAAATTACTTGAAAGGATTGATTGAACTTGAATGATTCCCTATCCGGACATGAACATAAAAGTGATTGTTCATTTACATGTATACCTTCTTTTGAAAGAATGGGTCAAGTCGTGTCTTAGAGAAGTACCAAGAAATAAAAGGAAGTTTCAATCACCTTCACCTTTCTCATGAGTGCTACCTGCTTTTGATATGACATCACGAACCCATATTTTACG

mRNA sequence

TGTTTGTAGCCAACGGGTTGAATGTCTCGAGCGCAATTGGGTGATTTGCCTTCGTTTCAATCACTATTGATCCCCAATTTTTCTACAATATTGATGGCTTGATGTGGCATCTCATGCCAAGCGATTCGAATTGAACATCGCGTCGAGAGAGATGCCTCAGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGTGACATTCAAGCTTGTCTCTCCAAAAATAACTTTCTTCCTCACAAGTGCGTCAGGGTTATTCAACTATTGCAGTATTGCTGTGAAAACTGCAATTACAAGTCAACACACTGTGCTTCTGTTTCTGACCTCTTAAAGCAAATGCCAAAGCCGAAAGGCCAGAAATCTTGATCCAAGTCGAGCCAGATGTAATTCAGTCTAGACGTGACAAACTAAATTAGGTGTTTACTTATAACTCAAGCCAACATATTATGGGATGGCACAGCCAATGCTGGACGCTGAATTCTGCTAGTTTTGCAAAATAGTGCAGATGGAAGAGATGAGGCCAGAAAACCAAAATCTTTGATAGATCAACATGAACTAATGCTAATGATGTTACCATTTCTTCACAAAGCCATCAACTTGCAAATCAACCTTTGTGTCCACTCTCTGTTCTCTAATAAAATATTTCTCCATACGTTTAACTATGATACAGGTCAGACATTAATTTTGGCCCTTCTTCATTTTGCATCTTCCGATTTTGATACAAAAATTACTTGAAAGGATTGATTGAACTTGAATGATTCCCTATCCGGACATGAACATAAAAGTGATTGTTCATTTACATGTATACCTTCTTTTGAAAGAATGGGTCAAGTCGTGTCTTAGAGAAGTACCAAGAAATAAAAGGAAGTTTCAATCACCTTCACCTTTCTCATGAGTGCTACCTGCTTTTGATATGACATCACGAACCCATATTTTACG

Coding sequence (CDS)

ATGCCTCAGCCGAGCAAAGAACCCTGCAAGAAGGAGGCGTGTGACATTCAAGCTTGTCTCTCCAAAAATAACTTTCTTCCTCACAAGTGCGTCAGGGTTATTCAACTATTGCAGTATTGCTGTGAAAACTGCAATTACAAGTCAACACACTGTGCTTCTGTTTCTGACCTCTTAAAGCAAATGCCAAAGCCGAAAGGCCAGAAATCTTGA

Homology

[Close]

BLAST of CmoCh04G005780 vs. Swiss-Prot
Match: CMC4_MOUSE (Cx9C motif-containing protein 4 OS=Mus musculus GN=Cmc4 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-07
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN+L  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYLESKCQAVIQELRKCC 39

[Close]

BLAST of CmoCh04G005780 vs. Swiss-Prot
Match: CMC4_BOVIN (Cx9C motif-containing protein 4 OS=Bos taurus GN=CMC4 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 1


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  NN++  KC  VI+ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYMESKCQAVIEELRKCC 39

[Close]

BLAST of CmoCh04G005780 vs. Swiss-Prot
Match: CMC4_HUMAN (Cx9C motif-containing protein 4 OS=Homo sapiens GN=CMC4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-06
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 1


Query: 4  PSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCC 42
          P K+PC+K+AC+IQ CL  N+++  KC  VIQ L+ CC
Sbjct: 2  PQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCC 39

[Close]

BLAST of CmoCh04G005780 vs. TrEMBL
Match: A0A0A0LC41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G228340 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.7e-28
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENC+YKSTHCASVS LLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 MPKPKGQKS 70
          + KPKGQKS
Sbjct: 61 I-KPKGQKS 68

[Close]

BLAST of CmoCh04G005780 vs. TrEMBL
Match: A0A022QEZ0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017584mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-23
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKK+ACDIQ+CLSKNNFLP KC++VIQLLQ+CCE C YKSTHC SVS LLKQ
Sbjct: 1  MAQPSKEPCKKQACDIQSCLSKNNFLPQKCIKVIQLLQFCCEQCEYKSTHCGSVSGLLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 INK 63

[Close]

BLAST of CmoCh04G005780 vs. TrEMBL
Match: D7TGV7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00710 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-23
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP+ SKEPCKKEACDIQACLSKNNFLP KC RVI+LLQ CCE C Y STHC SVSDLLKQ
Sbjct: 1  MPKQSKEPCKKEACDIQACLSKNNFLPQKCRRVIELLQSCCEKCEYNSTHCGSVSDLLKQ 60

Query: 61 MPK 64
           PK
Sbjct: 61 KPK 63

[Close]

BLAST of CmoCh04G005780 vs. TrEMBL
Match: A0A059AUJ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02752 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.3e-23
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKKEACDIQACL+KNNF+P KC+R I+ LQ CCE+C YKSTHCASVS LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLTKNNFIPQKCLRFIEALQSCCEHCEYKSTHCASVSGLLKQ 60

Query: 61 MPKPK 66
           PK K
Sbjct: 61 KPKSK 65

[Close]

BLAST of CmoCh04G005780 vs. TrEMBL
Match: S8D116_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_01308 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 5.6e-23
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M Q SKE CK+EACDIQACLSKNNFLP KC++VIQLLQ+CCE C YKSTHCASVSDLLKQ
Sbjct: 1  MAQQSKETCKREACDIQACLSKNNFLPQKCIKVIQLLQFCCEQCEYKSTHCASVSDLLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 INK 63

[Close]

BLAST of CmoCh04G005780 vs. TAIR10
Match: AT1G09794.1 (AT1G09794.1 Cox19 family protein (CHCH motif))

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-24
Identity = 48/63 (76.19%), Postives = 54/63 (85.71%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKKEACDIQACLSKNNFLP +C RVI++LQ CCE CN +STHC SV+ LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLSKNNFLPQRCQRVIEMLQACCERCNNESTHCGSVAALLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 IKK 63

[Close]

BLAST of CmoCh04G005780 vs. NCBI nr
Match: gi|659112052|ref|XP_008456041.1| (PREDICTED: cx9C motif-containing protein 4 [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 9.7e-29
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQ CCE+C+YKSTHCASVSDLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 MPKPKGQKS 70
          + KPK QKS
Sbjct: 61 I-KPKSQKS 68

[Close]

BLAST of CmoCh04G005780 vs. NCBI nr
Match: gi|449457033|ref|XP_004146253.1| (PREDICTED: cx9C motif-containing protein 4 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 8.2e-28
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENC+YKSTHCASVS LLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 MPKPKGQKS 70
          + KPKGQKS
Sbjct: 61 I-KPKGQKS 68

[Close]

BLAST of CmoCh04G005780 vs. NCBI nr
Match: gi|747080868|ref|XP_011087700.1| (PREDICTED: cx9C motif-containing protein 4 [Sesamum indicum])

HSP 1 Score: 115.9 bits (289), Expect = 2.7e-23
Identity = 53/63 (84.13%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKK+ACDIQACLSKNNFLP KCV+VIQLLQ CCE C YKSTHCASVS LLKQ
Sbjct: 1  MGQPSKEPCKKQACDIQACLSKNNFLPQKCVKVIQLLQSCCEQCEYKSTHCASVSGLLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 INK 63

[Close]

BLAST of CmoCh04G005780 vs. NCBI nr
Match: gi|848900407|ref|XP_012850363.1| (PREDICTED: cx9C motif-containing protein 4 [Erythranthe guttata])

HSP 1 Score: 115.2 bits (287), Expect = 4.7e-23
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          M QPSKEPCKK+ACDIQ+CLSKNNFLP KC++VIQLLQ+CCE C YKSTHC SVS LLKQ
Sbjct: 1  MAQPSKEPCKKQACDIQSCLSKNNFLPQKCIKVIQLLQFCCEQCEYKSTHCGSVSGLLKQ 60

Query: 61 MPK 64
          + K
Sbjct: 61 INK 63

[Close]

BLAST of CmoCh04G005780 vs. NCBI nr
Match: gi|359486167|ref|XP_003633403.1| (PREDICTED: cx9C motif-containing protein 4 [Vitis vinifera])

HSP 1 Score: 115.2 bits (287), Expect = 4.7e-23
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 1


Query: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60
          MP+ SKEPCKKEACDIQACLSKNNFLP KC RVI+LLQ CCE C Y STHC SVSDLLKQ
Sbjct: 1  MPKQSKEPCKKEACDIQACLSKNNFLPQKCRRVIELLQSCCEKCEYNSTHCGSVSDLLKQ 60

Query: 61 MPK 64
           PK
Sbjct: 61 KPK 63

The following BLAST results are available for this feature:

BLAST of CmoCh04G005780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CMC4_MOUSE	4.7e-07	57.89	Cx9C motif-containing protein 4 OS=Mus musculus GN=Cmc4 PE=2 SV=1	[more]
CMC4_BOVIN	1.8e-06	52.63	Cx9C motif-containing protein 4 OS=Bos taurus GN=CMC4 PE=3 SV=1	[more]
CMC4_HUMAN	3.0e-06	52.63	Cx9C motif-containing protein 4 OS=Homo sapiens GN=CMC4 PE=1 SV=1	[more]

BLAST of CmoCh04G005780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC41_CUCSA	5.7e-28	88.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G228340 PE=4 SV=1	[more]
A0A022QEZ0_ERYGU	3.3e-23	79.37	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017584mg PE=4 SV=1	[more]
D7TGV7_VITVI	3.3e-23	82.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00710 PE=4 SV=...	[more]
A0A059AUJ6_EUCGR	4.3e-23	78.46	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02752 PE=4 SV=1	[more]
S8D116_9LAMI	5.6e-23	80.95	Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_01308 PE=4 SV=1	[more]

BLAST of CmoCh04G005780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09794.1	2.6e-24	76.19	Cox19 family protein (CHCH motif)	[more]

BLAST of CmoCh04G005780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112052\|ref\|XP_008456041.1\|	9.7e-29	91.30	PREDICTED: cx9C motif-containing protein 4 [Cucumis melo]	[more]
gi\|449457033\|ref\|XP_004146253.1\|	8.2e-28	88.41	PREDICTED: cx9C motif-containing protein 4 [Cucumis sativus]	[more]
gi\|747080868\|ref\|XP_011087700.1\|	2.7e-23	84.13	PREDICTED: cx9C motif-containing protein 4 [Sesamum indicum]	[more]
gi\|848900407\|ref\|XP_012850363.1\|	4.7e-23	79.37	PREDICTED: cx9C motif-containing protein 4 [Erythranthe guttata]	[more]
gi\|359486167\|ref\|XP_003633403.1\|	4.7e-23	82.54	PREDICTED: cx9C motif-containing protein 4 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009069	Cys_alpha_HP_mot_SF
IPR027179	MTCP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G005780.1	CmoCh04G005780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009069	Cysteine alpha-hairpin motif superfamily	GENE3D	G3DSA:1.10.810.10		coord: 4..66 score: 5.3
IPR009069	Cysteine alpha-hairpin motif superfamily	unknown	SSF47072	Cysteine alpha-hairpin motif	coord: 4..63 score: 8.89
IPR027179	Mature-T-Cell Proliferation I type	PANTHER	PTHR15590:SF0	CX9C MOTIF-CONTAINING PROTEIN 4	coord: 1..65 score: 2.8
IPR027179	Mature-T-Cell Proliferation I type	PFAM	PF08991	MTCP1	coord: 8..61 score: 7.9
None	No IPR available	PANTHER	PTHR15590	FAMILY NOT NAMED	coord: 1..65 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G005780	Cucsa.032830	Cucumber (Gy14) v1	cgycmoB0012
CmoCh04G005780	CmaCh04G005440	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G005780	Cla004305	Watermelon (97103) v1	cmowmB699
CmoCh04G005780	Csa3G228340	Cucumber (Chinese Long) v2	cmocuB687
CmoCh04G005780	CSPI03G19190	Wild cucumber (PI 183967)	cmocpiB698
CmoCh04G005780	Lsi05G001540	Bottle gourd (USVL1VR-Ls)	cmolsiB683
CmoCh04G005780	Cp4.1LG01g01720	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G005780	MELO3C031671.2	Melon (DHL92) v3.6.1	cmomedB774
CmoCh04G005780	CsaV3_3G019300	Cucumber (Chinese Long) v3	cmocucB0814
CmoCh04G005780	Cla97C05G091780	Watermelon (97103) v2	cmowmbB735
CmoCh04G005780	Bhi01G001184	Wax gourd	cmowgoB0849
CmoCh04G005780	CsGy3G019140	Cucumber (Gy14) v2	cgybcmoB386
CmoCh04G005780	Carg11321	Silver-seed gourd	carcmoB0899
CmoCh04G005780	Carg13196	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G005780	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G005780	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G005780	Melon (DHL92) v3.5.1	cmomeB683
CmoCh04G005780	Watermelon (Charleston Gray)	cmowcgB660
CmoCh04G005780	Cucurbita pepo (Zucchini)	cmocpeB668