CsGy3G019140 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G019140
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	cx9C motif-containing protein 4
Location	Chr3 : 15333992 .. 15338710 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGTAAAAAGAAAAATAAAGATAAAGGATGAGAGCGAGAGAGGGGACGTGACGGAGTTGAATTTTGGAGGAAACAAATAACAAAGTTAGTTTTTGGTTTAATTGATTTGAATAATTTTTTATCGTCGAGATTCGAGTTGGACACAGCGAGAGAGAGAGAGAGAGATGCCTCCGCCGATCAAAGAACCCTGCAAGAAGGAAGCGTGCGATATTCAAGCTTGTCTTACCAAAAACAACTTTCTTCCCCACAAGTATGTTTTCTTTTTACATTTCTCTTTCCATTTCGTTTCCGCAGCAATCTCCCATGATAGAATAGAATCTCAAGTTTGATGTTGTTCGATTGAGTCATTTGCATGAATCGGTGGGTAGAAGGGTCTAATAATTCCAATACTTTTTTTTTTTCACTTTCTTTGTTTTCCTGTATCTATAAACCAAACTCTGGACTGCTATATATCCTTTCTGTTTTGTGCTTCGTTTTTCTTTGTTGTTCTATCCTTTGATCTCCCTTTGCGTTATGTGCGATCAAACAAAAATTTAATTAAGTAATGAAACAGGGGAACTTTTCGGTTTAATTCTTCGATGTTGCAACCATTTGGGCTTTTAGTTTTGATCCGTTTTCTGCCCTCTTCATGTTTGGTTCATTGACCGACGTAGTTACACCAAGTAGTGTAATCCTTGATTTGGGTTTTTCCGACAGCTTATTGAGGTCTGTATCCGTTCGTAAGAATTTTGTATAATTTTGTGTTGCTTTTTGTTCACTTCTAAAATTGAGATGCGTTTTGATGTACTTCCAAAAAATCAAGCTTATTTGCCACGTTCCGAAGATCAAGCTTCTTCTTTCTTGCCGCAGTAGGTTGGTCAGTCCTCCCGAATGATGTTTTCATGATTATAAGTGGAAGAAATATTTTCTATGAATTATTTAATTCTCATCTAAACCGTGAATGTTCTACTTCTACTCTGTCTTTCGCCTCTTCCATGAGTTCATGATAATCCCCAGCTTGAAAAATTTGTAGACCCTTCTCAGGTGTACAAATGAAATTTAGTCCAAGGTTTAAAATAAAATGAAATATGGACTTCTCCTAAATTACCCATTCGATCCTAAAACTCACACGATGGTCTGCTGCTCGAAATTGCTCTTCTGCCTTTCTCTGGCGTTTCATCCCTTGCTCATCACTTCGTCTGACAATGTTGTTCCGTTTTAAATGAATCTTAAACTCGCTTCTTCCTCTCATTCCATCCTCTCACTTCTTCCTTTCGTTCCTCGTCCAACACATCTCTTCTGGCTAGTTTTTTGGTAATTAATGCTCGTTATACGAAATTTTGATCTAATGCAAAAAAATCCACTAAGTCCTACAATCATTTTAAATCAATTTGAAGAAAGGATTTCGCAAGCTAGACTTTTGTAAGATAAAGAGCACAACATAAAATGTAAAAAACCCCTAACTTTTCGGTTACAAAGTATCCCAAAATATAAACTATGAAGGTTGTTGAATCGTCGTAGACAACCAGTTTCACACCAGTTTCACACGCTAAGTAAATGTACACTAGTGTGTTTGTTTCTTATTGGTTACGTTGTTTTTTGATAGAATCATTGTTTACATTGCGAGATTGTTTCACATAACCAACATAAAACGGTGGAATGTCTGTGAGATGTTATTATGAGCACGAGCTAGTATCTCAGAATGACAAGAGAGATGCGAGAGCAAGAAACGAGATGAGATTTTTGAACATGTGCCCAATGAGAGACGAGAGGAAGAAAGACAGAGCTAGAGTTTAACAAAATTGTAATTTTTTAATTCTTTTTCTTTTGTGTGTGTGTGTATTATTGTTTGAAGGATGGACGAGAAGCAGCTATTCATTCAATGGGATGACAAAAAATAATCCTATTAAGGAGGTCGTTTGAAGGGTATTGTCGTGCCGAGCATAGTGAATTGAGAGATCAGCTGTATGAACTTACAAAAGTTAGTTCTTTGGAGTTCAACATCATGGTGACAGTGAAATATAAGTTGGATGATGAATCTTCTCCAGTGTGACGATGATGTTAGATTTCTCATATTTGAGCTAGATTTTAATAGAAGGTCGATATTCGTAAGTGTTGAGAAAATCCTTCAAGAGACAACTTTCAGTGACACAGAGATAAAACTTGACCCCATTTGAAGTGGTTAAGTGTTGTTAGATGAGGAACGAGAGGAAGAGATAAGGTGTGAGGGGAAGGAACAAAGTGATTTTGGGCGGCAGGCCATCTTTGAGTTTCTAGGTCGAATGGGTAATTTCACATGCGACTGATGTACGCAAAAAACCATTTTCCATATTTGATTTTAACTCTTAGGTCAAATTTCATTTGGGTTCTAAAATGAGGACATCCGTACAAATTCTTGCCGAATTTCTACATTTTCAGTTATTCTAGTTTTTTATTTGGGTACCAACGGTTAGTTTGCTTGATTTTCCTTTTATCATTCCCTGCTAGAGGAATGGGAATTTACTGAAGTTCGATTTCTATTTTCCACAAACTGTCTTCAATTTCGACTTCTATTACTCTATCTTGCCAATGATAGTGTAGTCTGCGACTCTGCGCATTAACCTTCTCCTTTTTTCCTCCTTATTTCTTATTTTATTTCTCTTTATTGTTATCTCTTGGTAGTTTCTTCTGGCTAGAGGTGTAAATTTGGTGCATTTCTGCTGGAAGGTTGTTCAAAATATATGTCGATGAACCAAATTCTTTGATAATTAAATTTTTGTTCATAGTTTTGAAGCCACTGGCATTGGCCACACATTTGGCAGGTTTATACCCAGTAGATGTTGAAGTATGTTCTTTCTTATGTTGTATGCATGTAGTGTCTGTTGTAGTACCATCATTAATACCTGATGAGTAAGAAATTGGATTTGGATTCAATATATGCTGAAGGATGTGGTTCTTGGAAACTTGCCTTCTGCATTCAGGAGAAATGTCTTAATCTTCAAATTGCTAATCAACAAAAAGTTATGGGCATTATCTATATTAACAATTTTATTGGAAGAGAAAACTATCCACCTGGAGGATAGAGTGTAATCCATCCCCATGTCCAAAAGAGCCAACTAGGTACACAGAAGCAACAGCTCGAATTCATTATTCTGGGATTTATGTAGATAATGGGATGAGAGCCTGGGACGTTCTAACCTTCTGAGAACAAGAAGAGGATCAGCTAAGGAAGTTGATTTTCTTTGGCATTTGTTAAGAAGTCTCAAATGGGTGATGGTGCTGCTTAAACTCTCAAAAGATATGCAAATAAAGAATCCAAGAGGTCCGGGGTTGGTCCACCTCTTTGTTCTGCTTTGTTGTAGCTGCGGCGAACTGGGGATTGGTTATAGCTCTCCATTCATCTCTCTTCCCTTACTCAAATTTCGTTCCATTTTCAGTTGGAGAAAATGGATAAACAAGCTGGTTTGCACTAGAGATAAATAGCCCTTCACGTCGCAATCCTACTACATTACACGTCTTGTAATAATGTTGAAGTTTAATGTCACCATGATGTGGTCAATGCTGTTATACATGTGGATATTATCGTGCTGTTGAAACTTTCTAGGAAGTATAAGTCCTAATTCTTCCCGTTGTATTTTCTCCCTTCAGGAATGTTACAACACATATTTACTGAAGAGTAGGATTGCCTCGATAAGGCGCCTTAACGTCTGGATAAGATGACTTAACGTCTTGAGTCATTTCAATGTAGACTTGCCAAGAGTCATTTCAACCTAGGTGGAATTGGTTTTTTTTTTTCTTTTCTTTTTCCCTCCTATCAATGCGATTATTTGTTTATGCTCTCATTTGTTTGGGAAATGGGTGCTCGGCATAATGTAGTATGCATTGTGCCAGTGCCCATGTTTCCTGGATTTGGTTGTGCAGACAAATATCAGTTAGATGCTCGTAACACTTCTGTTTGTGTGATGGGGAAGGCTTTTGCTGAAACCAAATTGATATGTTCCTAATCAATTTGTTCATTGACATGGTTGTAGGTGCGTCAGGGTCATTCAGCTATTGCAACATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGGCCTCTTAAAGCAAATAAAGCCGAAAGGCCAGAAATCTTGATTCAAGGCATCTCAGGTGTAATCCAGCTTAGAAGTCACACCTCATTAGGTGTTGTTTTTAACTTGAAGCCACAATACGATGTTTTGCAAAATAGGCGAAAGAAAGATATGAGACCAGAGGCCTTCGATGGATCAACGGACAGCCAACAAAGTTGCCATTTCTTTCTAAATCCATCACCTGCAATATTTTCTAACAAAATATTTTAATTCTTTCTCAATGTCAAAGCATGATAAAAATTGACGACTAATATTGACTGTTTCAGTTTGTACTTCGCTGATTGGGACACAACCAATAGTTGGAAGAATCAATTAAACTTGAATTATATCTATTGCAAGTTCTTGTATCTCAATTGTCTAAAAAAATTCTGGAAATGATTTATTTGCACATTTTCACGTATACCTTCTTTTGTAAGAAAGGGAAAACACAGCAGCTTAGGGAAACAAAAGAGATTCCAATCAACCTGAGCTCTTGAAATTAGCCAAACTAGTCAACCATTTTCCTCAAAAGTGATGACACTGCTTCTTATGCATTATAAACCCATATTTTAAAATGTGAATGAAGAATAGCAAGGCGAATTTTGCAACAAAAAAAAAAATGAAATGGTTGA

mRNA sequence

AAAAGTAAAAAGAAAAATAAAGATAAAGGATGAGAGCGAGAGAGGGGACGTGACGGAGTTGAATTTTGGAGGAAACAAATAACAAAGTTAGTTTTTGGTTTAATTGATTTGAATAATTTTTTATCGTCGAGATTCGAGTTGGACACAGCGAGAGAGAGAGAGAGAGATGCCTCCGCCGATCAAAGAACCCTGCAAGAAGGAAGCGTGCGATATTCAAGCTTGTCTTACCAAAAACAACTTTCTTCCCCACAAGTGCGTCAGGGTCATTCAGCTATTGCAACATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGGCCTCTTAAAGCAAATAAAGCCGAAAGGCCAGAAATCTTGATTCAAGGCATCTCAGGTGTAATCCAGCTTAGAAGTCACACCTCATTAGGTGTTGTTTTTAACTTGAAGCCACAATACGATGTTTTGCAAAATAGGCGAAAGAAAGATATGAGACCAGAGGCCTTCGATGGATCAACGGACAGCCAACAAAGTTGCCATTTCTTTCTAAATCCATCACCTGCAATATTTTCTAACAAAATATTTTAATTCTTTCTCAATGTCAAAGCATGATAAAAATTGACGACTAATATTGACTGTTTCAGTTTGTACTTCGCTGATTGGGACACAACCAATAGTTGGAAGAATCAATTAAACTTGAATTATATCTATTGCAAGTTCTTGTATCTCAATTGTCTAAAAAAATTCTGGAAATGATTTATTTGCACATTTTCACGTATACCTTCTTTTGTAAGAAAGGGAAAACACAGCAGCTTAGGGAAACAAAAGAGATTCCAATCAACCTGAGCTCTTGAAATTAGCCAAACTAGTCAACCATTTTCCTCAAAAGTGATGACACTGCTTCTTATGCATTATAAACCCATATTTTAAAATGTGAATGAAGAATAGCAAGGCGAATTTTGCAACAAAAAAAAAAATGAAATGGTTGA

Coding sequence (CDS)

ATGCCTCCGCCGATCAAAGAACCCTGCAAGAAGGAAGCGTGCGATATTCAAGCTTGTCTTACCAAAAACAACTTTCTTCCCCACAAGTGCGTCAGGGTCATTCAGCTATTGCAACATTGCTGTGAGAACTGCGATTACAAATCAACACATTGTGCTTCTGTTTCTGGCCTCTTAAAGCAAATAAAGCCGAAAGGCCAGAAATCTTGA

Protein sequence

MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKPKGQKS

Homology

[Close]

BLAST of CsGy3G019140 vs. NCBI nr
Match: XP_004146253.1 (PREDICTED: cx9C motif-containing protein 4 [Cucumis sativus] >KGN57606.1 hypothetical protein Csa_3G228340 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 8.6e-34
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 IKPKGQKS 69
          IKPKGQKS
Sbjct: 61 IKPKGQKS 68

[Close]

BLAST of CsGy3G019140 vs. NCBI nr
Match: XP_008456041.1 (PREDICTED: cx9C motif-containing protein 4 [Cucumis melo])

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-28
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ CCE+CDYKSTHCASVS LLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 IKPKGQKS 69
          IKPK QKS
Sbjct: 61 IKPKSQKS 68

[Close]

BLAST of CsGy3G019140 vs. NCBI nr
Match: XP_022136460.1 (cx9C motif-containing protein 4 [Momordica charantia])

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-28
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCV+VIQLLQ+CCENCDYKSTHCASVS LLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVKVIQLLQYCCENCDYKSTHCASVSDLLKQ 60

Query: 61 I-KPKGQKS 69
          + KPKGQKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of CsGy3G019140 vs. NCBI nr
Match: XP_022942264.1 (cx9C motif-containing protein 4 [Cucurbita moschata])

HSP 1 Score: 132.1 bits (331), Expect = 7.1e-28
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENC+YKSTHCASVS LLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 60

Query: 61 I-KPKGQKS 69
          + KPKGQKS
Sbjct: 61 MPKPKGQKS 69

[Close]

BLAST of CsGy3G019140 vs. NCBI nr
Match: XP_022983557.1 (cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima])

HSP 1 Score: 132.1 bits (331), Expect = 7.1e-28
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ+CCENC+YKSTHCASVS LLKQ
Sbjct: 15 MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQYCCENCNYKSTHCASVSDLLKQ 74

Query: 61 I-KPKGQKS 69
          + KPKGQKS
Sbjct: 75 MPKPKGQKS 83

[Close]

BLAST of CsGy3G019140 vs. TAIR10
Match: AT1G09794.1 (Cox19 family protein (CHCH motif))

HSP 1 Score: 103.2 bits (256), Expect = 6.4e-23
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKKEACDIQACL+KNNFLP +C RVI++LQ CCE C+ +STHC SV+ LLKQ
Sbjct: 1  MAQPSKEPCKKEACDIQACLSKNNFLPQRCQRVIEMLQACCERCNNESTHCGSVAALLKQ 60

Query: 61 IK 63
          IK
Sbjct: 61 IK 62

[Close]

BLAST of CsGy3G019140 vs. Swiss-Prot
Match: sp|Q61908|CMC4_MOUSE (Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-07
Identity = 27/61 (44.26%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 4  PIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKP 63
          P K+PC+K+AC+IQ CL  NN+L  KC  VIQ L+ CC    Y        SG  K+ + 
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYLESKCQAVIQELRKCCAR--YPKGRSLVCSGFEKEEEE 60

Query: 64 K 65
          K
Sbjct: 62 K 60

[Close]

BLAST of CsGy3G019140 vs. Swiss-Prot
Match: sp|Q0VBY0|CMC4_BOVIN (Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-06
Identity = 25/61 (40.98%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 4  PIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQIKP 63
          P K+PC+K+AC+IQ CL  NN++  KC  VI+ L+ CC    Y        SG  K+ + 
Sbjct: 2  PQKDPCQKQACEIQKCLQANNYMESKCQAVIEELRKCCAR--YPKGRSLICSGFEKEEEE 60

Query: 64 K 65
          K
Sbjct: 62 K 60

[Close]

BLAST of CsGy3G019140 vs. Swiss-Prot
Match: sp|P56277|CMC4_HUMAN (Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.0e-06
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 4  PIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 61
          P K+PC+K+AC+IQ CL  N+++  KC  VIQ L+ CC    Y        SG  K+
Sbjct: 2  PQKDPCQKQACEIQKCLQANSYMESKCQAVIQELRKCC--AQYPKGRSVVCSGFEKE 56

[Close]

BLAST of CsGy3G019140 vs. Swiss-Prot
Match: sp|B5RTE0|CMC4_DEBHA (Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 5.8e-05
Identity = 27/63 (42.86%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 7  EPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCC-----ENCDYKSTHCASVSGLLKQI 65
          +PCK EAC IQ CL +NN+   KC ++I  L  CC     +N   K T C     LL Q+
Sbjct: 9  DPCKPEACAIQDCLQQNNYNESKCSKIIDNLYLCCKKYYEKNGSDKQTTCCPKFNLL-QL 68

[Close]

BLAST of CsGy3G019140 vs. Swiss-Prot
Match: sp|C5E268|CMC4_LACTC (Cx9C motif-containing protein 4, mitochondrial OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) OX=559295 GN=CMC4 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.2e-04
Identity = 24/58 (41.38%), Postives = 28/58 (48.28%), Query Frame = 0


Query: 7  EPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCC-----ENCDYKSTHCASVSGLLK 60
          +PCK +AC IQ CLTK  F   KC  +I  L  CC     E      T C  V  LL+
Sbjct: 3  DPCKPQACAIQGCLTKTGFDESKCSHLIDSLYECCSKFYNERGADARTPCCPVPSLLR 60

[Close]

BLAST of CsGy3G019140 vs. TrEMBL
Match: tr|A0A0A0LC41|A0A0A0LC41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.7e-34
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ
Sbjct: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60

Query: 61 IKPKGQKS 69
          IKPKGQKS
Sbjct: 61 IKPKGQKS 68

[Close]

BLAST of CsGy3G019140 vs. TrEMBL
Match: tr|A0A1S3C3J8|A0A1S3C3J8_CUCME (cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-28
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACL+KNNFLPHKCVRVIQLLQ CCE+CDYKSTHCASVS LLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLSKNNFLPHKCVRVIQLLQLCCEDCDYKSTHCASVSDLLKQ 60

Query: 61 IKPKGQKS 69
          IKPK QKS
Sbjct: 61 IKPKSQKS 68

[Close]

BLAST of CsGy3G019140 vs. TrEMBL
Match: tr|A0A2I4FV81|A0A2I4FV81_9ROSI (cx9C motif-containing protein 4 OS=Juglans regia OX=51240 GN=LOC109002325 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.0e-24
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKKEACDIQACLTKNNF+P +C++VI+LLQ CCE CDYKSTHCASVSGLLKQ
Sbjct: 1  MPQPSKEPCKKEACDIQACLTKNNFIPQRCLKVIELLQSCCEKCDYKSTHCASVSGLLKQ 60

Query: 61 IKPK 65
           KPK
Sbjct: 61 -KPK 63

[Close]

BLAST of CsGy3G019140 vs. TrEMBL
Match: tr|A0A2G9HCV0|A0A2G9HCV0_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12000 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          M  P KEPCKK+ACDIQACL+KNNFLP KCV+VIQLLQ+CCE C+YKSTHCASVS LLKQ
Sbjct: 1  MAQPSKEPCKKQACDIQACLSKNNFLPQKCVKVIQLLQYCCEQCEYKSTHCASVSSLLKQ 60

Query: 61 I 62
          I
Sbjct: 61 I 61

[Close]

BLAST of CsGy3G019140 vs. TrEMBL
Match: tr|A0A068TNJ3|A0A068TNJ3_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014895001 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 1  MPPPIKEPCKKEACDIQACLTKNNFLPHKCVRVIQLLQHCCENCDYKSTHCASVSGLLKQ 60
          MP P KEPCKK+ACDIQACLTK+NF P +CVRVI+LLQ CCE C YKSTHCASVSGLLKQ
Sbjct: 1  MPEPSKEPCKKQACDIQACLTKSNFNPQRCVRVIELLQACCEECKYKSTHCASVSGLLKQ 60

Query: 61 IK 63
          I+
Sbjct: 61 IR 62

The following BLAST results are available for this feature:

BLAST of CsGy3G019140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146253.1	8.6e-34	100.00	PREDICTED: cx9C motif-containing protein 4 [Cucumis sativus] >KGN57606.1 hypothe...	[more]
XP_008456041.1	2.4e-28	89.71	PREDICTED: cx9C motif-containing protein 4 [Cucumis melo]	[more]
XP_022136460.1	4.2e-28	88.41	cx9C motif-containing protein 4 [Momordica charantia]	[more]
XP_022942264.1	7.1e-28	88.41	cx9C motif-containing protein 4 [Cucurbita moschata]	[more]
XP_022983557.1	7.1e-28	88.41	cx9C motif-containing protein 4, mitochondrial [Cucurbita maxima]	[more]

BLAST of CsGy3G019140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09794.1	6.4e-23	72.58	Cox19 family protein (CHCH motif)	[more]

BLAST of CsGy3G019140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q61908\|CMC4_MOUSE	3.6e-07	44.26	Cx9C motif-containing protein 4 OS=Mus musculus OX=10090 GN=Cmc4 PE=2 SV=1	[more]
sp\|Q0VBY0\|CMC4_BOVIN	1.4e-06	40.98	Cx9C motif-containing protein 4 OS=Bos taurus OX=9913 GN=CMC4 PE=3 SV=1	[more]
sp\|P56277\|CMC4_HUMAN	3.0e-06	42.11	Cx9C motif-containing protein 4 OS=Homo sapiens OX=9606 GN=CMC4 PE=1 SV=1	[more]
sp\|B5RTE0\|CMC4_DEBHA	5.8e-05	42.86	Cx9C motif-containing protein 4, mitochondrial OS=Debaryomyces hansenii (strain ...	[more]
sp\|C5E268\|CMC4_LACTC	2.2e-04	41.38	Cx9C motif-containing protein 4, mitochondrial OS=Lachancea thermotolerans (stra...	[more]

BLAST of CsGy3G019140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LC41\|A0A0A0LC41_CUCSA	5.7e-34	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G228340 PE=4 SV=1	[more]
tr\|A0A1S3C3J8\|A0A1S3C3J8_CUCME	1.6e-28	89.71	cx9C motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103496091 PE=4 SV=...	[more]
tr\|A0A2I4FV81\|A0A2I4FV81_9ROSI	7.0e-24	82.81	cx9C motif-containing protein 4 OS=Juglans regia OX=51240 GN=LOC109002325 PE=4 S...	[more]
tr\|A0A2G9HCV0\|A0A2G9HCV0_9LAMI	1.3e-22	81.97	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12000 P...	[more]
tr\|A0A068TNJ3\|A0A068TNJ3_COFCA	2.3e-22	80.65	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014895001 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009069	Cys_alpha_HP_mot_SF
IPR027179	MTCP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G019140.1	CsGy3G019140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.287.1130		coord: 3..67 e-value: 5.0E-17 score: 63.5
IPR027179	Mature-T-Cell Proliferation I type	PFAM	PF08991	MTCP1	coord: 8..60 e-value: 1.1E-14 score: 54.3
IPR027179	Mature-T-Cell Proliferation I type	PANTHER	PTHR15590	FAMILY NOT NAMED	coord: 4..63
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	SSF47072	Cysteine alpha-hairpin motif	coord: 5..62

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G019140	Cla004305	Watermelon (97103) v1	cgybwmB229
CsGy3G019140	Csa3G228340	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G019140	CSPI03G19190	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G019140	CmaCh04G005440	Cucurbita maxima (Rimu)	cgybcmaB410
CsGy3G019140	CmoCh04G005780	Cucurbita moschata (Rifu)	cgybcmoB386
CsGy3G019140	Lsi05G001540	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G019140	Cp4.1LG01g01720	Cucurbita pepo (Zucchini)	cgybcpeB362
CsGy3G019140	MELO3C031671.2	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G019140	CsaV3_3G019300	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G019140	Cla97C05G091780	Watermelon (97103) v2	cgybwmbB206
CsGy3G019140	Bhi01G001184	Wax gourd	cgybwgoB271
CsGy3G019140	Carg13196	Silver-seed gourd	carcgybB0043

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G019140	Cucurbita moschata (Rifu)	cgybcmoB301
CsGy3G019140	Cucurbita pepo (Zucchini)	cgybcpeB317
CsGy3G019140	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G019140	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G019140	Silver-seed gourd	carcgybB0650
CsGy3G019140	Cucurbita maxima (Rimu)	cgybcmaB332