Cp4.1LG20g08970 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g08970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHydroxyproline-rich glycoprotein
LocationCp4.1LG20 : 6930333 .. 6930833 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGGTCACATCAATTTGTTGCGCGGTTCTTTCGGTTCTGCTTTTGGCGCAGTTCTCTGTTTCTGTGGATTTTCCCGCGGAATCTCCCGCTCCGCCACCGCAGACTGGCGCGGATTCCCCTCCGCCGCGTTCTCCTTCGAGAATCTCCAGTCCTCCGGCTCCATCGCCTCGGAATGCACCGGTGAGTTCTCCTCCATCACCTCCACTATCAGATCTTGCTCCTGGTTCGTCTCCAACTCCACCGCCTCCTCCTTCCTCTTCTCCGTCTCCACCGCCATCCGAAGCTAGCGACATTAGCCGGAACAATGTGAGCAAAAACGACGAATCGGATGAAGAATCGAAGAACGGAATGAGTGGAGCGAAGAAATTCGGAATCGCAATAGGAGTGATCGCGGCAGTTGCTTTGATTGGATTCGGAGGATTGGTGTACAAGAAGCGCCAAGACAATATTCGCCGGTCTCGCTATGGATATACAGCGAGGAGAGAGCTTCTGTGA

mRNA sequence

ATGGCCAAGGTCACATCAATTTGTTGCGCGGTTCTTTCGGTTCTGCTTTTGGCGCAGTTCTCTGTTTCTGTGGATTTTCCCGCGGAATCTCCCGCTCCGCCACCGCAGACTGGCGCGGATTCCCCTCCGCCGCGTTCTCCTTCGAGAATCTCCAGTCCTCCGGCTCCATCGCCTCGGAATGCACCGGTGAGTTCTCCTCCATCACCTCCACTATCAGATCTTGCTCCTGGTTCGTCTCCAACTCCACCGCCTCCTCCTTCCTCTTCTCCGTCTCCACCGCCATCCGAAGCTAGCGACATTAGCCGGAACAATGTGAGCAAAAACGACGAATCGGATGAAGAATCGAAGAACGGAATGAGTGGAGCGAAGAAATTCGGAATCGCAATAGGAGTGATCGCGGCAGTTGCTTTGATTGGATTCGGAGGATTGGTGTACAAGAAGCGCCAAGACAATATTCGCCGGTCTCGCTATGGATATACAGCGAGGAGAGAGCTTCTGTGA

Coding sequence (CDS)

ATGGCCAAGGTCACATCAATTTGTTGCGCGGTTCTTTCGGTTCTGCTTTTGGCGCAGTTCTCTGTTTCTGTGGATTTTCCCGCGGAATCTCCCGCTCCGCCACCGCAGACTGGCGCGGATTCCCCTCCGCCGCGTTCTCCTTCGAGAATCTCCAGTCCTCCGGCTCCATCGCCTCGGAATGCACCGGTGAGTTCTCCTCCATCACCTCCACTATCAGATCTTGCTCCTGGTTCGTCTCCAACTCCACCGCCTCCTCCTTCCTCTTCTCCGTCTCCACCGCCATCCGAAGCTAGCGACATTAGCCGGAACAATGTGAGCAAAAACGACGAATCGGATGAAGAATCGAAGAACGGAATGAGTGGAGCGAAGAAATTCGGAATCGCAATAGGAGTGATCGCGGCAGTTGCTTTGATTGGATTCGGAGGATTGGTGTACAAGAAGCGCCAAGACAATATTCGCCGGTCTCGCTATGGATATACAGCGAGGAGAGAGCTTCTGTGA

Protein sequence

MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRNAPVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Homology
[Close]
BLAST of Cp4.1LG20g08970 vs. TrEMBL
Match: A0A0A0LS26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G084290 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-53
Identity = 129/166 (77.71%), Postives = 142/166 (85.54%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKV S CCA+LSVLLL Q SVS D PA+SPAPPP+TG DSPPPRS S ISSPP  SPRN
Sbjct: 1   MAKVASFCCALLSVLLLMQVSVSADSPADSPAPPPETGVDSPPPRSSSGISSPPDASPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APV SPPSPP SDLAP +SP+PPP  S +PSPPPSEASD  R++V   DESDEESK+GMS
Sbjct: 61  APVRSPPSPPPSDLAP-TSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
           GA+KFGIAIGV+AAVA IGFGG+VYKKRQDNIRRS YGYTARRE+L
Sbjct: 121 GAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 165

[Close]
BLAST of Cp4.1LG20g08970 vs. TrEMBL
Match: W9REQ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007659 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-21
Identity = 83/162 (51.23%), Postives = 108/162 (66.67%), Query Frame = 1 

Query: 11  VLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSP-RNAPVSSPPSP 70
           +L +++    +VS   P  +P+P P  GADSP P S    S+P   +P  ++P  SPPSP
Sbjct: 12  LLLLIVCVGSAVSAQSPESAPSPAPALGADSPIPVS----SAPTVGAPVSDSPTFSPPSP 71

Query: 71  PLSDLAPGSSPT--PPPPPSSSPSPPPS---EASDISRNNVSKNDESDEESKNGMSGAKK 130
           P    APGSSPT  PPP PS+  SP PS   +ASDI+ +++  + E  E S  GMSG KK
Sbjct: 72  PPETHAPGSSPTSSPPPSPSTEKSPVPSPSPDASDINHSDMDVDGEVPEGSSGGMSGGKK 131

Query: 131 FGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
            GIA+GV+AA  L+G GG VYK+RQDNIRRS+YGY+ARRE+L
Sbjct: 132 AGIAVGVLAAACLVGLGGFVYKRRQDNIRRSQYGYSARREIL 169

[Close]
BLAST of Cp4.1LG20g08970 vs. TrEMBL
Match: K4C4A6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20
Identity = 87/173 (50.29%), Postives = 108/173 (62.43%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGAD--SPPPRSPSRISSPPAPSP 60
           MA V      +L  +LL Q  +  D PA SP+P P++GAD  SPP      +S  P+PSP
Sbjct: 1   MATVQMFSFTILFAVLLVQQCICTDPPASSPSPAPESGADVASPP------MSLAPSPSP 60

Query: 61  RNAPVSSPPSPPLSDLAPGSSPTPPPPPSSS-----PSPPPSEASDISRNNVSKNDESDE 120
               +SSPP+PPLSDL+  SSP P P  S+S     P+P    ASDIS  +V   D S E
Sbjct: 61  S---LSSPPAPPLSDLSRNSSPAPSPGDSTSKNSLSPAPNSKAASDISDESV---DSSKE 120

Query: 121 ESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
            S  GM+  KK GIA+GVIAAV  +G G LVYKKRQ NI+RS++GY ARRE+L
Sbjct: 121 SSGGGMTSGKKAGIAVGVIAAVCFVGIGALVYKKRQQNIQRSQFGYDARREIL 161

[Close]
BLAST of Cp4.1LG20g08970 vs. TrEMBL
Match: M5W0G1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012336mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-20
Identity = 84/176 (47.73%), Postives = 107/176 (60.80%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSV--SVDFPAESPAPPPQTGADSPPPRSPSRISSPP---A 60
           MA+   +C  +L   LL QFS+  S   P  SP P PQ  ADSP P+SPS  S  P    
Sbjct: 1   MARFIELCSPLLLAFLLVQFSIVSSSSPPRPSPTPSPQPAADSPSPKSPSTKSPSPISLP 60

Query: 61  PSPRNAPV-----SSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDE 120
           PSP NAPV     SSPP+PP S  +P  SP+    P   PSP PS  SD++ ++V+ + +
Sbjct: 61  PSPSNAPVNSPHPSSPPAPPQS--SPSQSPSADDTP-PVPSPAPSNPSDVNHSDVNADGD 120

Query: 121 SDEESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
             + S  GMS  KK G+ +GVI  V ++G  G VYKKRQDN+RRS+YGY ARRE+L
Sbjct: 121 GAKNSSGGMSPGKKAGVVLGVIVGVGVVGLAGFVYKKRQDNVRRSQYGYAARREIL 173

[Close]
BLAST of Cp4.1LG20g08970 vs. TrEMBL
Match: B9SWB6_RICCO (Structural constituent of cell wall, putative OS=Ricinus communis GN=RCOM_0154160 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-19
Identity = 79/162 (48.77%), Postives = 104/162 (64.20%), Query Frame = 1 

Query: 21  SVSVDFPAESPAPPPQTGADSPP-PRSPSRISSPPAPSPRN------------APVSSPP 80
           S+ + F A  P+PP  + + SP  P S S +S  PAPSP +            +P+SSPP
Sbjct: 17  SIQLAFSASPPSPPDSSPSPSPEQPPSDSPLSPSPAPSPSSNISESPHLPPSDSPISSPP 76

Query: 81  SPPLSDLAPGSSPTPPPPPSSSP-SPPPSEASDISRNNVSKNDESD--EESKNGMSGAKK 140
           +PP SDL P  +P   P P++SP SP P+ ++++S  N S N ESD  EE  +G++  KK
Sbjct: 77  APPPSDLTPAPTPASTPSPANSPDSPAPAPSTEVSDVNHSNNVESDGGEEKSSGLNSGKK 136

Query: 141 FGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
            GIA+GVI A  ++G G LVYKKRQDNIRRS+YGY ARRELL
Sbjct: 137 AGIAVGVIVAAGVVGVGALVYKKRQDNIRRSQYGYAARRELL 178

[Close]
BLAST of Cp4.1LG20g08970 vs. TAIR10
Match: AT3G45230.1 (AT3G45230.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-15
Identity = 71/172 (41.28%), Postives = 99/172 (57.56%), Query Frame = 1 

Query: 7   ICCAVLSVLLLAQFSVSVDFPAESP----------APPPQTGADSPPPRSPSRISSPPAP 66
           I   +LS++L++   ++   PA SP          +PP + G+ + P  SP   SSPP P
Sbjct: 7   IVAMMLSLVLVSGEILTKSSPAPSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEP 66

Query: 67  SPRNAPVSSPP-SPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVS--KNDESDE 126
              ++P  SP  SP +S   P  S +P    S SPSP   EASD++ ++++  + ++   
Sbjct: 67  ETEHSPSPSPANSPSVSPPLPNDSQSPSSSASPSPSP---EASDVNHSDITGIEGEKLPS 126

Query: 127 ESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARREL 166
            S  GMSG KK G+A G IAAV ++G  G VYKKRQ+NIRRSRYGY AR  L
Sbjct: 127 GSGGGMSGGKKVGVAFGAIAAVCVVGVAGFVYKKRQENIRRSRYGYAAREIL 175

[Close]
BLAST of Cp4.1LG20g08970 vs. TAIR10
Match: AT2G28440.1 (AT2G28440.1 proline-rich family protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.8e-09
Identity = 64/156 (41.03%), Postives = 80/156 (51.28%), Query Frame = 1 

Query: 28  AESPAPP--------PQTGADSPPPRSPSRISSPPAPSPRNAPVSSP------PSPPLSD 87
           A+SP PP        PQ+ A SP P S +   SPP P P+    SSP      P P  SD
Sbjct: 113 ADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPAPSD 172

Query: 88  LAPGSSPTPPPP--PSSSPSPPPSEASDISRNNVSKNDESDEESKN-GMSGAKKFGIAIG 147
                 P P     PS +PSP    A DI  ++ +  + +DE  ++ GMSG +K GIAIG
Sbjct: 173 DDSDDDPEPETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKAGIAIG 232

Query: 148 VIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
            I  V  I  G LVYKKR+DN+ R+RY Y    E L
Sbjct: 233 TILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]
BLAST of Cp4.1LG20g08970 vs. NCBI nr
Match: gi|659130679|ref|XP_008465291.1| (PREDICTED: classical arabinogalactan protein 9 [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 6.8e-60
Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKV S CCAVLSVLLL Q SVS D PAESPAPPPQTG DSPPPR+PS ISSPP  SPRN
Sbjct: 1   MAKVASFCCAVLSVLLLMQVSVSADSPAESPAPPPQTGVDSPPPRAPSSISSPPDASPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPT-PPPPPSSS--PSPPPSEASDISRNNVSKNDESDEESKN 120
           APVSSPPSPP SDLAP SSPT PPPPPSSS  PSPPPSEASD+SRNNV   +ESDEESK+
Sbjct: 61  APVSSPPSPPPSDLAPDSSPTSPPPPPSSSPAPSPPPSEASDVSRNNVISENESDEESKD 120

Query: 121 GMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
           GMSGAKKFGIAIGVIAAVALIGFGG+VYKKRQDNIRRS YGYTARRE+L
Sbjct: 121 GMSGAKKFGIAIGVIAAVALIGFGGMVYKKRQDNIRRSHYGYTARREIL 169

[Close]
BLAST of Cp4.1LG20g08970 vs. NCBI nr
Match: gi|778658880|ref|XP_011653442.1| (PREDICTED: classical arabinogalactan protein 9-like [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 4.7e-53
Identity = 129/166 (77.71%), Postives = 142/166 (85.54%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKV S CCA+LSVLLL Q SVS D PA+SPAPPP+TG DSPPPRS S ISSPP  SPRN
Sbjct: 1   MAKVASFCCALLSVLLLMQVSVSADSPADSPAPPPETGVDSPPPRSSSGISSPPDASPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APV SPPSPP SDLAP +SP+PPP  S +PSPPPSEASD  R++V   DESDEESK+GMS
Sbjct: 61  APVRSPPSPPPSDLAP-TSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
           GA+KFGIAIGV+AAVA IGFGG+VYKKRQDNIRRS YGYTARRE+L
Sbjct: 121 GAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 165

[Close]
BLAST of Cp4.1LG20g08970 vs. NCBI nr
Match: gi|694382098|ref|XP_009367083.1| (PREDICTED: classical arabinogalactan protein 4 [Pyrus x bretschneideri])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 90/175 (51.43%), Postives = 113/175 (64.57%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDF---PAESPAPPPQTGADSPPPRSPSRISSPPAPS 60
           M++   +   +L   LL QFS +V     P  SP P PQTGAD+P P SPS IS PP+PS
Sbjct: 1   MSRFIELLSPLLLAFLLVQFSTAVSSSSPPEPSPTPSPQTGADAPSPPSPSPISLPPSPS 60

Query: 61  --PRNAPV-SSPPSPPLSDLAPGSSPTPPPPPSSSPSPP---PSEASDISRNNVSKNDES 120
             P ++P+ SSPP+PP S        TP P P S PS P   PS  SDI+ NN++ + + 
Sbjct: 61  NAPADSPIPSSPPAPPHS--------TPSPSPDSEPSVPSSAPSVPSDINHNNINADGDG 120

Query: 121 DEESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
           +E S+ GMS  KK GIA GVI  V+L+G GG VYKKRQDN+RRS+YGY ARRE+L
Sbjct: 121 EEFSEGGMSTGKKAGIAFGVIVGVSLVGLGGFVYKKRQDNVRRSQYGYAARREIL 167

[Close]
BLAST of Cp4.1LG20g08970 vs. NCBI nr
Match: gi|657952763|ref|XP_008359187.1| (PREDICTED: proline-rich receptor-like protein kinase PERK2 [Malus domestica])

HSP 1 Score: 119.4 bits (298), Expect = 6.0e-24
Identity = 88/172 (51.16%), Postives = 109/172 (63.37%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDF---PAESPAPPPQTGADSPPPRSPSRISSPPAPS 60
           M++   +   +L   LL QFS +V     P  SP P PQ GADSP P SPS IS PP+PS
Sbjct: 1   MSRFIELLSPLLLAFLLIQFSTAVSSSSSPEPSPTPSPQPGADSPSPPSPSXISLPPSPS 60

Query: 61  --PRNAPV-SSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEE 120
             P ++P+ SSPP+PP S        TP P P S P   PS  SDI+ NN+S + + +E 
Sbjct: 61  NAPADSPIPSSPPAPPQS--------TPSPSPDSEP---PSVPSDINHNNISADGDGEES 120

Query: 121 SKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
           S+ GMS  KK GIA GVI  V+L+G GG VYKKRQDN+RRS+Y Y ARRE+L
Sbjct: 121 SEGGMSTGKKAGIAFGVIVGVSLVGLGGFVYKKRQDNVRRSQYSYAARREIL 161

[Close]
BLAST of Cp4.1LG20g08970 vs. NCBI nr
Match: gi|658039220|ref|XP_008355181.1| (PREDICTED: vegetative cell wall protein gp1-like [Malus domestica])

HSP 1 Score: 119.0 bits (297), Expect = 7.8e-24
Identity = 88/172 (51.16%), Postives = 109/172 (63.37%), Query Frame = 1 

Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDF---PAESPAPPPQTGADSPPPRSPSRISSPPAPS 60
           M++   +   +L   LL QFS +V     P  SP P PQ GADSP P SPS IS PP+PS
Sbjct: 1   MSRFIELLSPLLLAFLLIQFSTAVSSSSSPEPSPTPSPQPGADSPSPPSPSPISLPPSPS 60

Query: 61  --PRNAPV-SSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEE 120
             P ++P+ SSPP+PP S        TP P P S P   PS  SDI+ NN+S + + +E 
Sbjct: 61  NAPADSPIPSSPPAPPQS--------TPSPSPDSEP---PSVPSDINHNNISADGDGEES 120

Query: 121 SKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
           S+ GMS  KK GIA GVI  V+L+G GG VYKKRQDN+RRS+Y Y ARRE+L
Sbjct: 121 SEGGMSTGKKAGIAFGVIVGVSLVGLGGFVYKKRQDNVRRSQYSYAARREIL 161

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g08970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG20g08970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS26_CUCSA3.3e-5377.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G084290 PE=4 SV=1[more]
W9REQ8_9ROSA1.9e-2151.23Uncharacterized protein OS=Morus notabilis GN=L484_007659 PE=4 SV=1[more]
K4C4A6_SOLLC1.3e-2050.29Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M5W0G1_PRUPE1.6e-2047.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012336mg PE=4 SV=1[more]
B9SWB6_RICCO1.4e-1948.77Structural constituent of cell wall, putative OS=Ricinus communis GN=RCOM_015416... [more]
BLAST of Cp4.1LG20g08970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G45230.13.2e-1541.28 hydroxyproline-rich glycoprotein family protein[more]
AT2G28440.19.8e-0941.03 proline-rich family protein[more]
BLAST of Cp4.1LG20g08970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130679|ref|XP_008465291.1|6.8e-6085.21PREDICTED: classical arabinogalactan protein 9 [Cucumis melo][more]
gi|778658880|ref|XP_011653442.1|4.7e-5377.71PREDICTED: classical arabinogalactan protein 9-like [Cucumis sativus][more]
gi|694382098|ref|XP_009367083.1|1.2e-2451.43PREDICTED: classical arabinogalactan protein 4 [Pyrus x bretschneideri][more]
gi|657952763|ref|XP_008359187.1|6.0e-2451.16PREDICTED: proline-rich receptor-like protein kinase PERK2 [Malus domestica][more]
gi|658039220|ref|XP_008355181.1|7.8e-2451.16PREDICTED: vegetative cell wall protein gp1-like [Malus domestica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g08970.1Cp4.1LG20g08970.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g08970Cucsa.226920Cucumber (Gy14) v1cgycpeB0604
Cp4.1LG20g08970CmaCh13G001730Cucurbita maxima (Rimu)cmacpeB235
Cp4.1LG20g08970CmaCh01G005490Cucurbita maxima (Rimu)cmacpeB483
Cp4.1LG20g08970CmoCh13G001770Cucurbita moschata (Rifu)cmocpeB202
Cp4.1LG20g08970CmoCh01G005770Cucurbita moschata (Rifu)cmocpeB441
Cp4.1LG20g08970Csa1G084290Cucumber (Chinese Long) v2cpecuB516
Cp4.1LG20g08970MELO3C025771Melon (DHL92) v3.5.1cpemeB469
Cp4.1LG20g08970MELO3C026856Melon (DHL92) v3.5.1cpemeB479
Cp4.1LG20g08970CSPI01G12640Wild cucumber (PI 183967)cpecpiB518
Cp4.1LG20g08970MELO3C026856.2Melon (DHL92) v3.6.1cpemedB561
Cp4.1LG20g08970CsaV3_1G012810Cucumber (Chinese Long) v3cpecucB0635
Cp4.1LG20g08970Bhi08G000309Wax gourdcpewgoB0658
Cp4.1LG20g08970CsGy1G012640Cucumber (Gy14) v2cgybcpeB084
Cp4.1LG20g08970Carg21048Silver-seed gourdcarcpeB1022
Cp4.1LG20g08970Carg12323Silver-seed gourdcarcpeB0620
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g08970Cp4.1LG02g12970Cucurbita pepo (Zucchini)cpecpeB432
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g08970Cucurbita pepo (Zucchini)cpecpeB296
Cp4.1LG20g08970Cucurbita pepo (Zucchini)cpecpeB386
Cp4.1LG20g08970Cucurbita pepo (Zucchini)cpecpeB388
Cp4.1LG20g08970Cucurbita pepo (Zucchini)cpecpeB413
Cp4.1LG20g08970Bottle gourd (USVL1VR-Ls)cpelsiB422
Cp4.1LG20g08970Watermelon (Charleston Gray)cpewcgB462
Cp4.1LG20g08970Watermelon (Charleston Gray)cpewcgB467
Cp4.1LG20g08970Watermelon (97103) v1cpewmB507
Cp4.1LG20g08970Cucumber (Gy14) v2cgybcpeB817
Cp4.1LG20g08970Silver-seed gourdcarcpeB0469
Cp4.1LG20g08970Cucumber (Chinese Long) v3cpecucB0651
Cp4.1LG20g08970Wax gourdcpewgoB0628
Cp4.1LG20g08970Wax gourdcpewgoB0636