CSPI01G12640 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G12640
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Hydroxyproline-rich glycoprotein
Location	Chr1 : 8076699 .. 8078027 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTACTTCACCCTCTTATTCCTCTTTTAACTTTAAATTCACTTTTCTCTTTAAAACTCCAAATTTCCAACGCCGCCTCTCCCGGTGTCTCCTCCGTCACCTCCGCCGCTTCCTCTTTCACTTTACCTACCTGTCTCAATCTCATTCCTCTCTCCATTTTCCGTGCGCCTGAATCTACGCTTCATAGCTTTTTTTTCTCTCATCCCGAGGCCTAAATTCCAGATCTGCTTCTTCCACTCCAATTCACTCTCTTCTAAATTCTCGCTTTCGTTTCGGTTCCTTAGATCCTTTTCTTCATTCATCTTGATTTTGTAGAATATTTTTTACAACTTATGGCCGAGGTAGCATCATTTTGCTGTGCTCTTCTTTCGGTTCTGCTTTTAATGCAAGTCTCTGTTTCCGCGGATTCTCCCGCTCCGCCGCCGCAAACTGGTGTGGATTCCCCTCCGCCGCGTTCTTCTTCTGGCATCTCTAGCCCACCAGACGCATCGCCTCGGAATGCACCGGTGCGTTCTCCTCCATCGCCTCTACCATCAGATCTTGCTCCGACTTCACCGTCTCCTCCTCCTTCCTCTTCTCCGGCTCCATCTCCACCTCCATCCGAAGCTAGCGACTTTGGCAGGAGCAGTGTGATTAACGAAGACGAATCGGATGAAGAATCAAAAGACGGAATGAGTGGAGCTCAGAAATTCGGAATCGCAATCGGAGTAGTCGCAGCGGTTGCTTTTATTGGATTTGGAGGAGTGGTGTACAAGAAGCGGCAAGACAATATTCGCCGATCTCACTATGGATATACAGCGAGGAGAGAGATCCTGTGAAGATCGCCATAGCTACGGTACCTTACGATTTCTTAATGGAATTGATTTTTGTTTTGATATACACATTTTTTAGTGATTCAACTCTGTATTAAATATTCTTTTTGTTCGATTACGATTCCATTATCGGTCACTTATGCATCTGTTAGAGATTTTACTATTCTATTTCAATGTTTTCGAATTCAGATTTCACATTCTGCTTCCTTGTTTCATATTTTTTTTATCTTCATTATTTTCCGTCGTGTTCTTGATGATTTGGTTCTTGTTTGGTTGGTGAGAAAATTGATAAGAGTTATCATCGAATCTTCCTCCATATTTATTTTAAAATCTTCGGTTATTTCCTCTAATCACAAACATATTGTGTGCCATTGTTCATCTTCAATCTCTTGCCATTTATAAGATTCATTAAATTTGCTTCCTCAAAAAATAATTCAACTGAATCTGTTTCTTCTTCTTCTATTCTTCGTTTTTCTCTCAAATCATAAAATGTATTTATAAAATATACCAAAAATTT

mRNA sequence

ATGGCCGAGGTAGCATCATTTTGCTGTGCTCTTCTTTCGGTTCTGCTTTTAATGCAAGTCTCTGTTTCCGCGGATTCTCCCGCTCCGCCGCCGCAAACTGGTGTGGATTCCCCTCCGCCGCGTTCTTCTTCTGGCATCTCTAGCCCACCAGACGCATCGCCTCGGAATGCACCGGTGCGTTCTCCTCCATCGCCTCTACCATCAGATCTTGCTCCGACTTCACCGTCTCCTCCTCCTTCCTCTTCTCCGGCTCCATCTCCACCTCCATCCGAAGCTAGCGACTTTGGCAGGAGCAGTGTGATTAACGAAGACGAATCGGATGAAGAATCAAAAGACGGAATGAGTGGAGCTCAGAAATTCGGAATCGCAATCGGAGTAGTCGCAGCGGTTGCTTTTATTGGATTTGGAGGAGTGGTGTACAAGAAGCGGCAAGACAATATTCGCCGATCTCACTATGGATATACAGCGAGGAGAGAGATCCTGTGA

Coding sequence (CDS)

ATGGCCGAGGTAGCATCATTTTGCTGTGCTCTTCTTTCGGTTCTGCTTTTAATGCAAGTCTCTGTTTCCGCGGATTCTCCCGCTCCGCCGCCGCAAACTGGTGTGGATTCCCCTCCGCCGCGTTCTTCTTCTGGCATCTCTAGCCCACCAGACGCATCGCCTCGGAATGCACCGGTGCGTTCTCCTCCATCGCCTCTACCATCAGATCTTGCTCCGACTTCACCGTCTCCTCCTCCTTCCTCTTCTCCGGCTCCATCTCCACCTCCATCCGAAGCTAGCGACTTTGGCAGGAGCAGTGTGATTAACGAAGACGAATCGGATGAAGAATCAAAAGACGGAATGAGTGGAGCTCAGAAATTCGGAATCGCAATCGGAGTAGTCGCAGCGGTTGCTTTTATTGGATTTGGAGGAGTGGTGTACAAGAAGCGGCAAGACAATATTCGCCGATCTCACTATGGATATACAGCGAGGAGAGAGATCCTGTGA

Homology

[Close]

BLAST of CSPI01G12640 vs. TrEMBL
Match: A0A0A0LS26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G084290 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.2e-72
Identity = 158/165 (95.76%), Postives = 160/165 (96.97%), Query Frame = 1


Query: 1   MAEVASFCCALLSVLLLMQVSVSA----DSPAPPPQTGVDSPPPRSSSGISSPPDASPRN 60
           MA+VASFCCALLSVLLLMQVSVSA    DSPAPPP+TGVDSPPPRSSSGISSPPDASPRN
Sbjct: 1   MAKVASFCCALLSVLLLMQVSVSADSPADSPAPPPETGVDSPPPRSSSGISSPPDASPRN 60

Query: 61  APVRSPPSPLPSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMSG 120
           APVRSPPSP PSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMSG
Sbjct: 61  APVRSPPSPPPSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMSG 120

Query: 121 AQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           AQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL
Sbjct: 121 AQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 165

[Close]

BLAST of CSPI01G12640 vs. TrEMBL
Match: A0A0D2UJU3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G106500 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-20
Identity = 77/164 (46.95%), Postives = 105/164 (64.02%), Query Frame = 1


Query: 4   VASFCCALLSVLLLMQVSVSADSPAPPPQTGVDSPPPRSSSGISSPPDASPRNAPVR--S 63
           +A+F    ++  L+ +++ + DSPAP P  G D+ P  + + +S  PD++P  +PV   S
Sbjct: 1   MATFGFLTIAFFLVFELTFATDSPAPAPSLGADTSPLLAPTPVSGSPDSAPLISPVMPAS 60

Query: 64  PPSPL---PSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSV-INEDESDEESKDGMSGA 123
           PP+P+   PSDLA    S   SSSPAPSP   +ASD   S++   E E+      G++G 
Sbjct: 61  PPAPIAPSPSDLAEGESSS--SSSPAPSP--GDASDIDHSNINAKESENKTGGGGGLNGG 120

Query: 124 QKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           +K GI +GVVAA   +GFGG+VYKKRQDNIRRS YGY ARREIL
Sbjct: 121 KKAGIVVGVVAAACLVGFGGLVYKKRQDNIRRSQYGYAARREIL 160

[Close]

BLAST of CSPI01G12640 vs. TrEMBL
Match: V4RT81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029471mg PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-19
Identity = 76/151 (50.33%), Postives = 99/151 (65.56%), Query Frame = 1


Query: 14  VLLLMQVSVSADSPAPPPQTGVDSPPPRSSSGISSPPDASPRNAPVRSPPSPLPSDLAPT 73
           +LL +   VS DSPAP P+   DSP P S + +S+PP  +P  + + SPP+P PSDL+ +
Sbjct: 11  LLLSLHYVVSLDSPAPSPEHPADSPAP-SPAPVSAPPHHAPEISSISSPPAPPPSDLS-S 70

Query: 74  SPSP-PPSSSPAPSPPPSEASDFGRSSVINEDESDEESKD--GMSGAQKFGIAIGVVAAV 133
           +PSP PPS SP P+P P+E SD   S+ IN D       D  GMSG +K GIA+GV+ A 
Sbjct: 71  APSPSPPSPSPDPAPAPAEVSDLNHSN-INADGVGSPGGDDGGMSGGKKAGIALGVILAA 130

Query: 134 AFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
             +  GG+VYKKRQDNIRR+ Y Y AR E+L
Sbjct: 131 GVVVVGGLVYKKRQDNIRRAQYSYAARTELL 158

[Close]

BLAST of CSPI01G12640 vs. TrEMBL
Match: A0A067DGZ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031492mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-18
Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 1


Query: 14  VLLLMQVSVSADSPAPPPQTGVDSPPPRSSSGISSPPDASPRNAPVRSPPSPLPSDLAPT 73
           +LL +   VS DSPAP P+   DSP P S   +S  P  +P  + + SPP+P PSDL+ +
Sbjct: 11  LLLSLHYVVSLDSPAPSPEHPADSPAP-SPGPVSVSPHHAPEISSISSPPAPPPSDLS-S 70

Query: 74  SPSP-PPSSSPAPSPPPSEASDFGRSSVINEDESDEESKD--GMSGAQKFGIAIGVVAAV 133
           +PSP PP+ SP P+P P+E SD   S+ IN D       D  GMSG +K GIA+GV+   
Sbjct: 71  APSPSPPAPSPDPAPAPAEVSDLNHSN-INADGVGSSGGDDGGMSGGKKAGIALGVILVA 130

Query: 134 AFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
             +  GG+VYKKRQDNIRR+ YGY AR E+L
Sbjct: 131 CVVVVGGLVYKKRQDNIRRAQYGYAARTELL 158

[Close]

BLAST of CSPI01G12640 vs. TrEMBL
Match: A0A0V0H560_SOLCH (Putative proline-rich receptor-like protein kinase PERK12-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-18
Identity = 79/170 (46.47%), Postives = 102/170 (60.00%), Query Frame = 1


Query: 1   MAEVASFCCALLSVLLLMQVSVSADSPAPPPQTGVDSPPPRSSSGISSPPDASPRNAP-- 60
           MA V  F   LL  +LL+Q  +  D PA  P     SP P S + ++SPP  SP  +P  
Sbjct: 1   MATVRMFSFTLLCAVLLVQQCICTDPPASSP-----SPAPESGADVASPP-VSPAPSPSS 60

Query: 61  -VRSPPSPLPSDLAP-TSPSPPPSSS-----PAPSPPPSEASDFGRSSVINEDESDEESK 120
            + SPP+P PSDL+P +SP+P P  S     P+P+P    ASD    S    + S E S 
Sbjct: 61  NLTSPPAPSPSDLSPNSSPAPSPGDSTSKDSPSPAPNSEAASDISHESA---ESSKESSG 120

Query: 121 DGMSGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
            GM+  +K GIA+GV+AAV F+G G +VYKKRQ NI+RS +GY ARREIL
Sbjct: 121 GGMTSGKKAGIAVGVIAAVCFVGVGAIVYKKRQQNIQRSQFGYDARREIL 161

[Close]

BLAST of CSPI01G12640 vs. TAIR10
Match: AT3G45230.1 (AT3G45230.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-15
Identity = 68/150 (45.33%), Postives = 86/150 (57.33%), Query Frame = 1


Query: 24  ADSP----APPPQTGVDSPPPRSSSGISSPPDASPRNAPVRSPPS------PLPSDLAPT 83
           ADSP    +PP + G  + P  S    SSPP+    ++P  SP +      PLP+D    
Sbjct: 34  ADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPETEHSPSPSPANSPSVSPPLPND---- 93

Query: 84  SPSPPPSSSPAPSPPPSEASDFGRSSV--INEDESDEESKDGMSGAQKFGIAIGVVAAVA 143
           S SP  S+SP+PSP   EASD   S +  I  ++    S  GMSG +K G+A G +AAV 
Sbjct: 94  SQSPSSSASPSPSP---EASDVNHSDITGIEGEKLPSGSGGGMSGGKKVGVAFGAIAAVC 153

Query: 144 FIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
            +G  G VYKKRQ+NIRRS YGY A REIL
Sbjct: 154 VVGVAGFVYKKRQENIRRSRYGYAA-REIL 175

[Close]

BLAST of CSPI01G12640 vs. TAIR10
Match: AT2G28440.1 (AT2G28440.1 proline-rich family protein)

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-11
Identity = 64/160 (40.00%), Postives = 78/160 (48.75%), Query Frame = 1


Query: 21  SVSADSPAPP--------PQTGVDSPPPRSSSGISSPPDASPRNAPVRSP------PSPL 80
           S  ADSP PP        PQ+   SP P S +   SPP   P+     SP      P P 
Sbjct: 110 SPEADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPA 169

Query: 81  PSDLAPTSPSPPPSS----SPAPSPPPSEASDFGRSSVINEDESDEESKD-GMSGAQKFG 140
           PSD   +   P P +    SPAPSP    A D   S    E+ +DE  +D GMSG +K G
Sbjct: 170 PSD-DDSDDDPEPETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKAG 229

Query: 141 IAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           IAIG +  V  I  G +VYKKR+DN+ R+ Y Y    E L
Sbjct: 230 IAIGTILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of CSPI01G12640 vs. NCBI nr
Match: gi|778658880|ref|XP_011653442.1| (PREDICTED: classical arabinogalactan protein 9-like [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 7.5e-72
Identity = 158/165 (95.76%), Postives = 160/165 (96.97%), Query Frame = 1


Query: 1   MAEVASFCCALLSVLLLMQVSVSA----DSPAPPPQTGVDSPPPRSSSGISSPPDASPRN 60
           MA+VASFCCALLSVLLLMQVSVSA    DSPAPPP+TGVDSPPPRSSSGISSPPDASPRN
Sbjct: 1   MAKVASFCCALLSVLLLMQVSVSADSPADSPAPPPETGVDSPPPRSSSGISSPPDASPRN 60

Query: 61  APVRSPPSPLPSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMSG 120
           APVRSPPSP PSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMSG
Sbjct: 61  APVRSPPSPPPSDLAPTSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGMSG 120

Query: 121 AQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           AQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL
Sbjct: 121 AQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 165

[Close]

BLAST of CSPI01G12640 vs. NCBI nr
Match: gi|659130679|ref|XP_008465291.1| (PREDICTED: classical arabinogalactan protein 9 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 3.2e-62
Identity = 143/169 (84.62%), Postives = 153/169 (90.53%), Query Frame = 1


Query: 1   MAEVASFCCALLSVLLLMQVSVSADSPA----PPPQTGVDSPPPRSSSGISSPPDASPRN 60
           MA+VASFCCA+LSVLLLMQVSVSADSPA    PPPQTGVDSPPPR+ S ISSPPDASPRN
Sbjct: 1   MAKVASFCCAVLSVLLLMQVSVSADSPAESPAPPPQTGVDSPPPRAPSSISSPPDASPRN 60

Query: 61  APVRSPPSPLPSDLAP----TSPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKD 120
           APV SPPSP PSDLAP    TSP PPPSSSPAPSPPPSEASD  R++VI+E+ESDEESKD
Sbjct: 61  APVSSPPSPPPSDLAPDSSPTSPPPPPSSSPAPSPPPSEASDVSRNNVISENESDEESKD 120

Query: 121 GMSGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           GMSGA+KFGIAIGV+AAVA IGFGG+VYKKRQDNIRRSHYGYTARREIL
Sbjct: 121 GMSGAKKFGIAIGVIAAVALIGFGGMVYKKRQDNIRRSHYGYTARREIL 169

[Close]

BLAST of CSPI01G12640 vs. NCBI nr
Match: gi|1009115758|ref|XP_015874402.1| (PREDICTED: mucin-1 [Ziziphus jujuba])

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 78/168 (46.43%), Postives = 106/168 (63.10%), Query Frame = 1


Query: 4   VASFCCALLSVLLLMQVSVSADSP----APPPQTGVDSPPPRSSSGISSPPDASPRNAPV 63
           +  FC ALL +L L++ +VS D P    +P P++G D+P   SS   +  P  SP   PV
Sbjct: 5   IGQFCLALLLLLSLVEFTVSVDPPESPPSPAPESGADAPSSLSSVPTAGGP--SPVQGPV 64

Query: 64  RS-PPSPLPSDLAPT-----SPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDG 123
            S PP+P P ++AP+     +PSP    S  P+P PS ASD   S + ++D   + S  G
Sbjct: 65  SSSPPAPTPGNVAPSLSHAPTPSPADEKSAVPTPEPSTASDINHSGINSDDGEKDSSSGG 124

Query: 124 MSGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           MSG +K GIA+GV+AA   +GFGG++YKKRQ+NIRRS Y YTARR+IL
Sbjct: 125 MSGGKKAGIAVGVIAAAFVVGFGGMLYKKRQENIRRSQYSYTARRDIL 170

[Close]

BLAST of CSPI01G12640 vs. NCBI nr
Match: gi|657952763|ref|XP_008359187.1| (PREDICTED: proline-rich receptor-like protein kinase PERK2 [Malus domestica])

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 79/171 (46.20%), Postives = 97/171 (56.73%), Query Frame = 1


Query: 1   MAEVASFCCALLSVLLLMQVSVSADS-------PAPPPQTGVDSPPPRSSSGISSPPDAS 60
           M+        LL   LL+Q S +  S       P P PQ G DSP P S S IS PP  S
Sbjct: 1   MSRFIELLSPLLLAFLLIQFSTAVSSSSSPEPSPTPSPQPGADSPSPPSPSXISLPP--S 60

Query: 61  PRNAPVRSPPSPLPSDLAPTSPSPPPSSSPAPSP---PPSEASDFGRSSVINEDESDEES 120
           P NAP  SP         P+SP  PP S+P+PSP   PPS  SD   +++  + + +E S
Sbjct: 61  PSNAPADSP--------IPSSPPAPPQSTPSPSPDSEPPSVPSDINHNNISADGDGEESS 120

Query: 121 KDGMSGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           + GMS  +K GIA GV+  V+ +G GG VYKKRQDN+RRS Y Y ARREIL
Sbjct: 121 EGGMSTGKKAGIAFGVIVGVSLVGLGGFVYKKRQDNVRRSQYSYAARREIL 161

[Close]

BLAST of CSPI01G12640 vs. NCBI nr
Match: gi|658039220|ref|XP_008355181.1| (PREDICTED: vegetative cell wall protein gp1-like [Malus domestica])

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20
Identity = 79/171 (46.20%), Postives = 97/171 (56.73%), Query Frame = 1


Query: 1   MAEVASFCCALLSVLLLMQVSVSADS-------PAPPPQTGVDSPPPRSSSGISSPPDAS 60
           M+        LL   LL+Q S +  S       P P PQ G DSP P S S IS PP  S
Sbjct: 1   MSRFIELLSPLLLAFLLIQFSTAVSSSSSPEPSPTPSPQPGADSPSPPSPSPISLPP--S 60

Query: 61  PRNAPVRSPPSPLPSDLAPTSPSPPPSSSPAPSP---PPSEASDFGRSSVINEDESDEES 120
           P NAP  SP         P+SP  PP S+P+PSP   PPS  SD   +++  + + +E S
Sbjct: 61  PSNAPADSP--------IPSSPPAPPQSTPSPSPDSEPPSVPSDINHNNISADGDGEESS 120

Query: 121 KDGMSGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 162
           + GMS  +K GIA GV+  V+ +G GG VYKKRQDN+RRS Y Y ARREIL
Sbjct: 121 EGGMSTGKKAGIAFGVIVGVSLVGLGGFVYKKRQDNVRRSQYSYAARREIL 161

The following BLAST results are available for this feature:

BLAST of CSPI01G12640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G12640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS26_CUCSA	5.2e-72	95.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G084290 PE=4 SV=1	[more]
A0A0D2UJU3_GOSRA	6.1e-20	46.95	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G106500 PE=4 SV=1	[more]
V4RT81_9ROSI	1.0e-19	50.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029471mg PE=4 SV=1	[more]
A0A067DGZ3_CITSI	2.5e-18	49.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031492mg PE=4 SV=1	[more]
A0A0V0H560_SOLCH	3.3e-18	46.47	Putative proline-rich receptor-like protein kinase PERK12-like OS=Solanum chacoe...	[more]

BLAST of CSPI01G12640 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45230.1	5.3e-15	45.33	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	7.8e-11	40.00	proline-rich family protein	[more]

BLAST of CSPI01G12640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658880\|ref\|XP_011653442.1\|	7.5e-72	95.76	PREDICTED: classical arabinogalactan protein 9-like [Cucumis sativus]	[more]
gi\|659130679\|ref\|XP_008465291.1\|	3.2e-62	84.62	PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]	[more]
gi\|1009115758\|ref\|XP_015874402.1\|	1.2e-21	46.43	PREDICTED: mucin-1 [Ziziphus jujuba]	[more]
gi\|657952763\|ref\|XP_008359187.1\|	1.0e-20	46.20	PREDICTED: proline-rich receptor-like protein kinase PERK2 [Malus domestica]	[more]
gi\|658039220\|ref\|XP_008355181.1\|	1.3e-20	46.20	PREDICTED: vegetative cell wall protein gp1-like [Malus domestica]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G12640.1	CSPI01G12640.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G12640	Csa1G084290	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G12640	MELO3C026856	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G12640	MELO3C025771	Melon (DHL92) v3.5.1	cpimeB010
CSPI01G12640	Lsi02G014170	Bottle gourd (USVL1VR-Ls)	cpilsiB023
CSPI01G12640	MELO3C026856.2	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G12640	CsaV3_1G012810	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G12640	Cla97C03G053160	Watermelon (97103) v2	cpiwmbB034
CSPI01G12640	Bhi08G000309	Wax gourd	cpiwgoB042
CSPI01G12640	Cucsa.226920	Cucumber (Gy14) v1	cgycpiB337
CSPI01G12640	CmaCh01G005490	Cucurbita maxima (Rimu)	cmacpiB434
CSPI01G12640	CmaCh13G001730	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G12640	CmoCh13G001770	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G12640	CmoCh01G005770	Cucurbita moschata (Rifu)	cmocpiB425
CSPI01G12640	Cp4.1LG02g12970	Cucurbita pepo (Zucchini)	cpecpiB530
CSPI01G12640	Cp4.1LG20g08970	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G12640	CsGy1G012640	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G12640	Carg21048	Silver-seed gourd	carcpiB0761
CSPI01G12640	Carg12323	Silver-seed gourd	carcpiB0477

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G12640	Wild cucumber (PI 183967)	cpicpiB048
CSPI01G12640	Cucumber (Chinese Long) v2	cpicuB048
CSPI01G12640	Watermelon (Charleston Gray)	cpiwcgB040
CSPI01G12640	Watermelon (97103) v1	cpiwmB012
CSPI01G12640	Cucumber (Chinese Long) v3	cpicucB059