Cp4.1LG17g08630 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGGGTTTGGGATTAATTTAGGAACACGGAGGAAGAGTTTCATTTTTGAACCTCTGTAACTTTCTGCTGTTTAAAATGTTCGAATTTTGGGGTTCTTGTTCACATTAAATTTTACCGGCTTACAGTTGCATCTGAATTTTTGGGATTCTTTCTGGTCGTTTTCATCTTTGATAATTAACAAGTAATTAAATTTGCATCATCGACTTTAGCCAATGGACTGCAATTTGGATATATCCATTTTTCAAGTTGTATTTCAAGAACTCGGTCTGTCTATCTATCTTAATGCTTGAAATTTCTGAAGTTATCAAGTCACAACATGAAGAGTTATATGAGTGAGTTGTGTTAATTTCATGTTCTAGCGACCTTCAGACATGTGCTTGTGGGTTATCTATTTGGATAAATTTTGAGGCACCTTTTGAACTTGCTTGCCTGCTTCTCGGTGGACTAATCAGAATATGGTTTTTTAGATTTCCATTATGATATTGGTGTTTATGTGACAGGATATGTTGTCTTTCTTTACATTACATTGAAAGTAATTGCTTGATGAGCTACTTTTCTTTCGATTAGAATATATCAAATTTATATCAAACTGAGCTTAGCTCAACGGTTATTGACATGAACTCTTTCCCTTGAGGGTCGTAGGTTCTAACCCCATGTTTGAAAATTGCATTCTTTGGCTTATTTCTGCATCATATGTTGAAATAAACAACGTTTTCTTGCATTGGGAGTGTTGGTTGCCTCATTCTTACATCTGTTGGTAATGGAAGAACTGGAGAACAGTGCTGAATGGTTACTACTTGGTTGCATTTGTCTTGCATCAGTACAAGAGCCAAGAGATAAAGAATTGTGCTCGTATGAGTTCCATTTTTTAGAAAGAAAAAAAGTGCCACTGTTTGGATTTCTTACTTATATATGATGTTTGGAATGTCTTGTTCTTGGTGAAGTCATCATCAACAACATTAGAAACTGAGATCAATTACCCTTCCTCGAAATGTTCTGCTAGCATGCTAAATGAACTTCAATCTTGCTGTGAAAAAAGTTAAAAAATCATGTAGTAAATTATCTAATCCGTGCTTTACATTTCAGGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCGAAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTTTTCTTTGCACGATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTAATACTCGGGTTAGTGCTCTGCAATTTGTGCATTTTGTTTGTAATTCCGAACAATTTGGGTTGAAGATTTAAAAAGAAAAAAAAAAAAAGAAGAAAGAAAATGAGTTCAAGTTAGTCAGTTTGCCATACAAAGTTGTGTAGTAAAATGCAAGTGAACTCTGTATACGTTAATATCTGAGAAATGAATTTCTTAACACAAAGAATGCATTAACCAGTCATTTTGTGTTTGCTGATTAGTAATGTATGTGGTCTTGGGTGCATGAAAATCAACTGTGTTACCCTGCAGAAACGAATTTAATGCTTTATTTGAACAATTCACTGGTGCCTAAGATGCCTGAAATCTGTTTGTTTGACTCATGAATAGCTCTGTGTACTCATAGTAGCATAATTGTTGGGTAATTGATAATTCATAGTAAATTTTAGGTAGACGGTGATTATGACT ATGATAGGGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCGAAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTTTTCTTTGCACGATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTAATACTCGGGTTAGTGCTCTGCAATTTGTGCATTTTGTTTGTAATTCCGAACAATTTGGGTTGAAGATTTAAAAAGAAAAAAAAAAAAAGAAGAAAGAAAATGAGTTCAAGTTAGTCAGTTTGCCATACAAAGTTGTGTAGTAAAATGCAAGTGAACTCTGTATACGTTAATATCTGAGAAATGAATTTCTTAACACAAAGAATGCATTAACCAGTCATTTTGTGTTTGCTGATTAGTAATGTATGTGGTCTTGGGTGCATGAAAATCAACTGTGTTACCCTGCAGAAACGAATTTAATGCTTTATTTGAACAATTCACTGGTGCCTAAGATGCCTGAAATCTGTTTGTTTGACTCATGAATAGCTCTGTGTACTCATAGTAGCATAATTGTTGGGTAATTGATAATTCATAGTAAATTTTAGGTAGACGGTGATTATGACT ATGATAGGGCTGACTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCGAAAGGCCTTTCCTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTTCAGCGACATCGCTTCCTCCTCACAGCACTTGTCCTCTTGACTTTTCTTTGCACGATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTGCTCTGGACTGACTGGGGCGCAAAAGGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTAA MIGLTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL
BLAST of Cp4.1LG17g08630 vs. TrEMBL
Match: A0A0A0K6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 3.1e-41 Identity = 95/103 (92.23%), Postives = 96/103 (93.20%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. TrEMBL
Match: A0A0A0L9L6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710730 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 4.5e-32 Identity = 75/95 (78.95%), Postives = 83/95 (87.37%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. TrEMBL
Match: B9RGQ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442830 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 5.8e-32 Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. TrEMBL
Match: A0A0L9VFP9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.9e-30 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. TrEMBL
Match: V7BTB8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G195900g PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.9e-30 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. TAIR10
Match: AT1G16170.1 (AT1G16170.1 unknown protein) HSP 1 Score: 107.8 bits (268), Expect = 4.0e-24 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. TAIR10
Match: AT1G79660.1 (AT1G79660.1 unknown protein) HSP 1 Score: 100.9 bits (250), Expect = 4.9e-22 Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. NCBI nr
Match: gi|659122533|ref|XP_008461194.1| (PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo]) HSP 1 Score: 178.3 bits (451), Expect = 6.9e-42 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. NCBI nr
Match: gi|700189975|gb|KGN45208.1| (hypothetical protein Csa_7G431400 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 4.4e-41 Identity = 95/103 (92.23%), Postives = 96/103 (93.20%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. NCBI nr
Match: gi|778728887|ref|XP_011659492.1| (PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus]) HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36 Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. NCBI nr
Match: gi|778682913|ref|XP_011651806.1| (PREDICTED: uncharacterized protein LOC101216392 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 6.4e-32 Identity = 75/95 (78.95%), Postives = 83/95 (87.37%), Query Frame = 1
BLAST of Cp4.1LG17g08630 vs. NCBI nr
Match: gi|255543409|ref|XP_002512767.1| (PREDICTED: uncharacterized protein LOC8280287 isoform X1 [Ricinus communis]) HSP 1 Score: 144.8 bits (364), Expect = 8.4e-32 Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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