Cp4.1LG12g07290 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g07290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEphrin-A3
LocationCp4.1LG12 : 7069204 .. 7072076 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTTTAATAACCGTTTTAATGGCGGCCATAGCCCCATCCAAGAGCCACCCACCATCGAAGGGGCCGATTTACATAGCTACCACTCATCACCCACCCGCCTCTCTCTATATATGGTATTCCCACGTTTTTTTCAACTGTGGAGACCGCGTGGACGGCCTTTCAGGCATCTTTTTTCCCGGAGCCGAGGCGCGGCCAAACCCACGGCTCCACATAAATATCCATTCACCTCCTTCCGTTTAATTGACATCCATTTTCGCGTTGGGTTGTTCGCGGGTTTTGATTTTGTAAGTCCCTTTCTCTCTCTCTCTCTCTGATTTGATGTTTCACAATGATGTTAATCGCTTGAAATTTCCTCGATTGGGGCTCGGCTTGTCGGATTTTGGCTGTGTAATGGGAAGTAGGTTTGAAATTTCCGCGATTGGGTTTGGCCCCATCGATTGGCTTCGATCTTCCGAGGCCACGCATCTCATGAGTTTCTTTGTTTATTTCACTCGCGGTTGTTTATTTGCTTGGTTCCTTACGTTCTTTTCGGTGGGGGTTGAAGAATTTAAGCCACGACTTCGAAATGATAGATTTGGGATTAATTTAGGAACATGGAGGAAGAATCTCATTTCTGCCGAATGTTCAATTGAAGAACCTATGTAACTTTGTGCTGCTTAAAATGTTAGAATATAAAGGTCAGAAACATGGGACTTGCTCATATTAATTAACTAATAAGGTCCAATGTCAAGCCAAACATCTGTTCTAAAGGTAACGGGGGAAATGTTCTGGCGTACAGGTACACCCGAATTTTGGGGATACTTGCAGGTCGTTTTCATAATTTTGACAATTAACGAGTCCTTTAATCCTTATTTATGAGACGTTCTAATCGCTAGCTTTTTAGCTTATTGAATGCAATTTACTGGGTTATATCAAATTGTTAGGCTACTTTTCCAGAACTGGTCTTTTCATGATGTCATTTTTTCCCTTTCGTTTCTATTGCCATTAGACCTTGGCCTGCCTATCTTAAAGCTTAAAATTTCTGAAGCTATCCTGATTGCAGTTTGATTGTTGACGGAAAGGGCTGTAAGTTACAACAAAGAGTTATATGATTGAGTTGTGTTGATTTCATGTTCTAGTGATGTGCTTTCTTGTTATCTATTTGGATAAATTTTGAGGCACCTTTTGAACCTGCTTGGCTGCTTCTTGGTAGATTTGTCAGAATATGGTTTTCTAGATTATGTCATTCTTATATGATATTGGTGCGAAAGGAGATCTTGGCTTTCTCCATAATGCATTGGAAGTAATTGTTTGATGAGCTGTTTCTCTCTCAATTAGACTGTGTCGTACATCATTGAATGCTTTACCATATTGTTTTCCTCTAATATGTGTGTGTGTATACCATCCATAAATTATGATTAGTAACGTTGATCCCTCGTCAACTCGGTCGATAATCTTTTCTTTCCTCTTCTTTCCAAGAGATATGCTTAATGGGCCGAGAACTGCATCTCCGTTTGTTGTGTAAGCTTACGTCAGTTGTCTGCTATAAGATAGCTAGTTTTGGGGTGTTTGTTGAAAAGCTAATCCGACTTGGCTTTGATCTCTCGTGACTTGTATTGTAGTCCTATTTGCCATGACTGTTTTGGGGAGGGTTGGTTGCCTCATGCTTACATCAGTTGGCAATGGAAGAGTTGAGAACTACACCAGGGTTGGTTACTTGTTCGCATGTGTTTTGCATCCGTTTGTACTAGAGCTAAGAGATTGAGAGTTGTGCTAGTGTATGAGATCTCACATCAATTGGAGAGGGGAACGAAACATTCCTTGTAAGGATGTGGAAACCTCTCCCTGGCAGACGTATTTTAAAACCGTGAGACTAACGACGATACGTAACGAGCCAAAACGGACAATATCTACTAGCGGTGGGTTTGAGCTGTTACAAATGGTATTAGAGTCAGACACCGGATGGTGTGCCAACCAAGACGCTAGGCCCCTAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACAAAGCATTCCTTATAAGGGCGTGAGAACAAAGCTTTTTAAAACCGTGAGGCTAACGATACATAACAGGCCAAAGCGGACAATATCTACTAATCGTGGGTTTGGGTTGTTACATAGAGTACAGTGCCAGTGTTTGGTCTTTAATTGTATTATATCTGGAATGTCTTGTTCTGGGTGAAATCACCACCAACGATATTAGAAACTGAGATCAATTACTCAAAATATGCTACAGACCCTGCTCTATGAACTCCCCTCTTGTCGTGAACAAAAATTAAGAATCCTGTAGCAAGTTATCTAATCTGTGCTGTACATTTCAGGCTACCTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGCACTGTCTTCTCCTCACAGGAGGTCTCCATCATTCTGTAAGTCCTTTACGGATGAGTTGGATGGTTGGTCGACTCTCGTTCGGCGACATCGCTTCCTCCTGACGGCACTTGTCCTCCTGACTGCTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGATTGACTGGGGCGCAAAAAGCTGAGTGTCTACAGGAGCTTGTAAAGACTTCCATGGCTAAAGGGAAGCTGAAAATTCTGTGATACTAGGGAGCTCGCCCCTTTTGTTTGGAGACTTGAAAAGAAGAGGGAAATTTTTTTAAGTCAGTCAGTTTGTCATACAAGGCCGTGTAGTAAAATCTAAGTGAACTCTCTGTACAGTACATGATGTCTGATAAAAGATGCATTCTTGATATCTAAAAAAAACTTCAAAAAATGCCTTAGTTACTCATTTTGGTGCCTAAGATGCACATCAAATCTGTGTTGGTTGAC

mRNA sequence

ATGCCGCTACCTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGCACTGTCTTCTCCTCACAGGAGGTCTCCATCATTCTGTAAGTCCTTTACGGATGAGTTGGATGGTTGGTCGACTCTCGTTCGGCGACATCGCTTCCTCCTGACGGCACTTGTCCTCCTGACTGCTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGATTGACTGGGGCGCAAAAAGCTGAGTGTCTACAGGAGCTTGTAAAGACTTCCATGGCTAAAGGGAAGCTGAAAATTCTGTGATACTAGGGAGCTCGCCCCTTTTGTTTGGAGACTTGAAAAGAAGAGGGAAATTTTTTTAAGTCAGTCAGTTTGTCATACAAGGCCGTGTAGTAAAATCTAAGTGAACTCTCTGTACAGTACATGATGTCTGATAAAAGATGCATTCTTGATATCTAAAAAAAACTTCAAAAAATGCCTTAGTTACTCATTTTGGTGCCTAAGATGCACATCAAATCTGTGTTGGTTGAC

Coding sequence (CDS)

ATGCCGCTACCTGAGGAGGTTGGATCATGCAACATGGTTCTTGACAGTGCACTGTCTTCTCCTCACAGGAGGTCTCCATCATTCTGTAAGTCCTTTACGGATGAGTTGGATGGTTGGTCGACTCTCGTTCGGCGACATCGCTTCCTCCTGACGGCACTTGTCCTCCTGACTGCTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGATTGACTGGGGCGCAAAAAGCTGAGTGTCTACAGGAGCTTGTAAAGACTTCCATGGCTAAAGGGAAGCTGAAAATTCTGTGA

Protein sequence

MPLPEEVGSCNMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL
Homology
[Close]
BLAST of Cp4.1LG12g07290 vs. TrEMBL
Match: A0A0A0K6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.4e-38
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 3   LPEEVGSCNMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTI 62
           L EE GSC MVLDS LSSPHRRSPSF KSF +EL  WSTLV+RHRFLLTALVLLT LCTI
Sbjct: 18  LTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTI 77

Query: 63  YLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           YLYFAVTLGSSSSCFGLTG QKA+C  EL KTSMAKGKLKIL
Sbjct: 78  YLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

[Close]
BLAST of Cp4.1LG12g07290 vs. TrEMBL
Match: A0A0L9VFP9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-28
Identity = 71/94 (75.53%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFT-DELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTL 71
           MVLDS LSSP  +SPSF + FT DEL  WSTLV+RHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLKSPSFRRQFTKDELGSWSTLVQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 72  GSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           G+S +C GLTGAQKA C  ELVK S+AKGKLKIL
Sbjct: 61  GASGTCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

[Close]
BLAST of Cp4.1LG12g07290 vs. TrEMBL
Match: V7BTB8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G195900g PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.0e-28
Identity = 71/94 (75.53%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFT-DELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTL 71
           MVLDS LSSP  +SPSF + FT DEL  WSTLV+RHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLKSPSFRRQFTKDELGSWSTLVQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 72  GSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           G S++C GLTGAQKA C  ELVK S+AKGKLKIL
Sbjct: 61  GPSATCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

[Close]
BLAST of Cp4.1LG12g07290 vs. TrEMBL
Match: A0A151S136_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029832 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-27
Identity = 71/94 (75.53%), Postives = 76/94 (80.85%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFT-DELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTL 71
           MVLDS LSSP  RSPS  + F  DEL  WSTLV+RHRFLL+ALVLL  LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLRSPSLRRQFAKDELGSWSTLVQRHRFLLSALVLLAILCTVYLYFAVTL 60

Query: 72  GSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           GSS +C GLTGAQKA C  ELVK SMAKGKLKIL
Sbjct: 61  GSSGTCSGLTGAQKASCHMELVKDSMAKGKLKIL 94

[Close]
BLAST of Cp4.1LG12g07290 vs. TrEMBL
Match: C6T256_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-27
Identity = 69/94 (73.40%), Postives = 78/94 (82.98%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFT-DELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTL 71
           MVLDS L+SP  +SPSF + FT DEL  WSTL +RHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1   MVLDSILTSPRLKSPSFRRQFTKDELGSWSTLFQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 72  GSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           G+S +C GLTGAQKA C  ELVK S+AKGKLKIL
Sbjct: 61  GASGTCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

[Close]
BLAST of Cp4.1LG12g07290 vs. TAIR10
Match: AT1G16170.1 (AT1G16170.1 unknown protein)

HSP 1 Score: 97.8 bits (242), Expect = 4.1e-21
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTLG 71
           MVLD  +SSP RR     K + DEL  WSTL++RH++LLTAL LL  LCT+YLYFAVTLG
Sbjct: 1   MVLDGLVSSPSRRQQCLKKQW-DELGSWSTLIQRHQYLLTALALLAFLCTVYLYFAVTLG 60

Query: 72  S-SSSCFGLTGAQKAECLQELVKTSMAKGKLK 103
           +  SSC+GLTG  KA C  +LV+ +++KGKLK
Sbjct: 61  ARHSSCYGLTGKDKAMCQLQLVQ-ALSKGKLK 90

[Close]
BLAST of Cp4.1LG12g07290 vs. TAIR10
Match: AT1G79660.1 (AT1G79660.1 unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 4.3e-18
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTLG 71
           MVLD  +SSP RR P   K   D+L   ST+V+RHRFLLTA++LL  LCTIY+YFAVTLG
Sbjct: 1   MVLDGIVSSPLRR-PHALKKQWDDLGSCSTVVQRHRFLLTAMLLLAFLCTIYIYFAVTLG 60

Query: 72  SSS-SCFGLTGAQKAECLQELVKTSMAKGKLK 103
           +    C G+TG  KA C  E ++ S + GKLK
Sbjct: 61  ARHLLCSGMTGKDKAMCQMEHIQASFSNGKLK 91

[Close]
BLAST of Cp4.1LG12g07290 vs. NCBI nr
Match: gi|700189975|gb|KGN45208.1| (hypothetical protein Csa_7G431400 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 7.8e-38
Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 1 

Query: 3   LPEEVGSCNMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTI 62
           L EE GSC MVLDS LSSPHRRSPSF KSF +EL  WSTLV+RHRFLLTALVLLT LCTI
Sbjct: 18  LTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTI 77

Query: 63  YLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           YLYFAVTLGSSSSCFGLTG QKA+C  EL KTSMAKGKLKIL
Sbjct: 78  YLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

[Close]
BLAST of Cp4.1LG12g07290 vs. NCBI nr
Match: gi|659122533|ref|XP_008461194.1| (PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 7.8e-38
Identity = 84/102 (82.35%), Postives = 91/102 (89.22%), Query Frame = 1 

Query: 3   LPEEVGSCNMVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTI 62
           L EE+GSCNMVLDS LSSPHRRSPSF KSF +EL  WSTL++RHRFLLTALVLLT LCTI
Sbjct: 2   LTEEIGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLMQRHRFLLTALVLLTFLCTI 61

Query: 63  YLYFAVTLGSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           YLYFAVTLGSSSSC+GLTG QKA+C  EL KTS+AKGKLKIL
Sbjct: 62  YLYFAVTLGSSSSCYGLTGTQKAQCQLELAKTSIAKGKLKIL 103

[Close]
BLAST of Cp4.1LG12g07290 vs. NCBI nr
Match: gi|778728887|ref|XP_011659492.1| (PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-34
Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFTDELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTLG 71
           MVLDS LSSPHRRSPSF KSF +EL  WSTLV+RHRFLLTALVLLT LCTIYLYFAVTLG
Sbjct: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60

Query: 72  SSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           SSSSCFGLTG QKA+C  EL KTSMAKGKLKIL
Sbjct: 61  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 93

[Close]
BLAST of Cp4.1LG12g07290 vs. NCBI nr
Match: gi|920712636|gb|KOM53885.1| (hypothetical protein LR48_Vigan09g254400 [Vigna angularis])

HSP 1 Score: 132.9 bits (333), Expect = 3.3e-28
Identity = 71/94 (75.53%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFT-DELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTL 71
           MVLDS LSSP  +SPSF + FT DEL  WSTLV+RHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLKSPSFRRQFTKDELGSWSTLVQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 72  GSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           G+S +C GLTGAQKA C  ELVK S+AKGKLKIL
Sbjct: 61  GASGTCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

[Close]
BLAST of Cp4.1LG12g07290 vs. NCBI nr
Match: gi|593695585|ref|XP_007148291.1| (hypothetical protein PHAVU_006G195900g [Phaseolus vulgaris])

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-28
Identity = 71/94 (75.53%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 12  MVLDSALSSPHRRSPSFCKSFT-DELDGWSTLVRRHRFLLTALVLLTALCTIYLYFAVTL 71
           MVLDS LSSP  +SPSF + FT DEL  WSTLV+RHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLKSPSFRRQFTKDELGSWSTLVQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 72  GSSSSCFGLTGAQKAECLQELVKTSMAKGKLKIL 105
           G S++C GLTGAQKA C  ELVK S+AKGKLKIL
Sbjct: 61  GPSATCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g07290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6S1_CUCSA5.4e-3884.31Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1[more]
A0A0L9VFP9_PHAAN2.3e-2875.53Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1[more]
V7BTB8_PHAVU3.0e-2875.53Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G195900g PE=4 SV=1[more]
A0A151S136_CAJCA1.1e-2775.53Uncharacterized protein OS=Cajanus cajan GN=KK1_029832 PE=4 SV=1[more]
C6T256_SOYBN1.9e-2773.40Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of Cp4.1LG12g07290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16170.14.1e-2159.78 unknown protein[more]
AT1G79660.14.3e-1855.43 unknown protein[more]
BLAST of Cp4.1LG12g07290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189975|gb|KGN45208.1|7.8e-3884.31hypothetical protein Csa_7G431400 [Cucumis sativus][more]
gi|659122533|ref|XP_008461194.1|7.8e-3882.35PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo][more]
gi|778728887|ref|XP_011659492.1|4.0e-3486.02PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus][more]
gi|920712636|gb|KOM53885.1|3.3e-2875.53hypothetical protein LR48_Vigan09g254400 [Vigna angularis][more]
gi|593695585|ref|XP_007148291.1|4.3e-2875.53hypothetical protein PHAVU_006G195900g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07290.1Cp4.1LG12g07290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34774FAMILY NOT NAMEDcoord: 13..104
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07290Cucsa.106010Cucumber (Gy14) v1cgycpeB0229
Cp4.1LG12g07290CmaCh08G005830Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g07290CmaCh14G010430Cucurbita maxima (Rimu)cmacpeB260
Cp4.1LG12g07290CmaCh17G009070Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g07290CmaCh01G001900Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g07290CmoCh01G001980Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g07290CmoCh14G010610Cucurbita moschata (Rifu)cmocpeB224
Cp4.1LG12g07290CmoCh17G008780Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g07290CmoCh08G005740Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g07290Cla015313Watermelon (97103) v1cpewmB131
Cp4.1LG12g07290Csa3G710730Cucumber (Chinese Long) v2cpecuB137
Cp4.1LG12g07290Csa7G431400Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g07290MELO3C024884Melon (DHL92) v3.5.1cpemeB133
Cp4.1LG12g07290ClCG09G003430Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g07290ClCG10G012830Watermelon (Charleston Gray)cpewcgB134
Cp4.1LG12g07290CSPI03G30220Wild cucumber (PI 183967)cpecpiB138
Cp4.1LG12g07290CSPI07G20010Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g07290Lsi03G012500Bottle gourd (USVL1VR-Ls)cpelsiB116
Cp4.1LG12g07290Lsi02G026540Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g07290MELO3C029246.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07290CsaV3_7G031790Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07290CsGy7G018280Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07290Carg13495Silver-seed gourdcarcpeB0631
Cp4.1LG12g07290Carg11256Silver-seed gourdcarcpeB1144
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g07290Cp4.1LG17g08630Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g07290Cp4.1LG03g08950Cucurbita pepo (Zucchini)cpecpeB185
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g07290Silver-seed gourdcarcpeB0493
Cp4.1LG12g07290Wax gourdcpewgoB0201
Cp4.1LG12g07290Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g07290Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g07290Cucumber (Gy14) v2cgybcpeB308