Csa7G431400 (gene) Cucumber (Chinese Long) v2

NameCsa7G431400
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAt1g79660/F20B17_9
LocationChr7 : 16953240 .. 16954400 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTAACGTAAAATAGCCAATTTGGCTTGACTTCTCTATTGCTCGTGGCTTGTATTGTAGTCCTATTGACTAAGAATGTTTTGGGAAGGGTTGGTTGCCTCATTCTTACATCGGTTGGTAATGTAAGCGTAGGAGAACTACATTAGGGTTGGTCATTTGGTCACATTTGTTTGCCTCTCTTTGTACTAGAGCTGAGAGATGGATAAAGTATCATCGTAATGCAAAGTAGAATTCTAACAGTTTCTCCAAGTCAAAATAACCATGAGCAGCCAAGTCTCTTATTTACTACGAAGACAAAGGAGAATTATCAAATTCTCATTAAATTTATTCAATTTTATACTTCTTTATGCTGGAGTAAACCAGAAAAGTTTGGGGTGTTTGGTCTTTAATTGTGTTCATATTTGAAATGTCTTATTATGGGTGAAGTCACCACCAACAGTATTAGAAACTGAGATCAATTACTCATTTTCAAAATTGATGCATACCCTGCTAGTGCTATATGAACTTCGATAGTGTTGCAAATTGTCTAATCTGTGGTGTATATTTCAGGCTGACTGAGGAAGCTGGATCATGCACCATGGTTCTTGACAGCGTCCTTTCTTCTCCTCACAGGAGGTCCCCGTCATTCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTTGTGCAACGACATCGCTTCCTCCTGACAGCACTTGTCCTCCTAACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGACTCAAAAAGCTCAGTGTCATCTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAATTGAAAATTCTTTGATACTTGGGATTTCGATCCAAAGCTCACGTCTTTTGTTTGTAGTTCTTAAAAGTTTGGGTTGAATGATTTAAAAAAAAATGAAATTTAGTTAATCTGTCATACAAGGTTGTGTAGTAAGATGTAAGCGAACTCTCTATACATGATATCCGAGAAGAAAAAAAGGAATTAATCAATCATTCTTGTGTTTTGCTGATCTATAGTGTACATGCTCTTCAGTACATGAGAAAATTAACTGTGTTATCAAGCAGAAACCAATTTAATTCTTTATTTCCTAAAGTTCTGAAATGTGTTGGTTGATATGT

mRNA sequence

ATGAACTTCGATAGTGTTGCAAATTGTCTAATCTGTGGTGTATATTTCAGGCTGACTGAGGAAGCTGGATCATGCACCATGGTTCTTGACAGCGTCCTTTCTTCTCCTCACAGGAGGTCCCCGTCATTCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTTGTGCAACGACATCGCTTCCTCCTGACAGCACTTGTCCTCCTAACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGACTCAAAAAGCTCAGTGTCATCTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAATTGAAAATTCTTTGA

Coding sequence (CDS)

ATGAACTTCGATAGTGTTGCAAATTGTCTAATCTGTGGTGTATATTTCAGGCTGACTGAGGAAGCTGGATCATGCACCATGGTTCTTGACAGCGTCCTTTCTTCTCCTCACAGGAGGTCCCCGTCATTCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTTGTGCAACGACATCGCTTCCTCCTGACAGCACTTGTCCTCCTAACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGACTCAAAAAGCTCAGTGTCATCTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAATTGAAAATTCTTTGA

Protein sequence

MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL*
BLAST of Csa7G431400 vs. TrEMBL
Match: A0A0A0K6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.2e-61
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1

Query: 1   MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQR 60
           MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQR
Sbjct: 1   MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQR 60

Query: 61  HRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           HRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL
Sbjct: 61  HRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

BLAST of Csa7G431400 vs. TrEMBL
Match: B9RGQ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442830 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 1

Query: 15  YFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTF 74
           + RL E      MVLD++LSSPHRRSPSFRK FP +ELGSWSTLVQRHRFLLTALVLL F
Sbjct: 16  FMRLVEGVRLKDMVLDNILSSPHRRSPSFRKQFPRDELGSWSTLVQRHRFLLTALVLLAF 75

Query: 75  LCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLK 118
           LCTIYLYFAVTLG++ SC GLTG QKA C+LELAK+S+ KGK+K
Sbjct: 76  LCTIYLYFAVTLGATGSCSGLTGKQKALCNLELAKSSV-KGKMK 118

BLAST of Csa7G431400 vs. TrEMBL
Match: A0A0A0L9L6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710730 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-32
Identity = 75/95 (78.95%), Postives = 83/95 (87.37%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 86
           MVLDS+L+SPHRRSPSFRK FP NELGSWSTL +RHRFLLTAL LLTFLCTIYLYFA+TL
Sbjct: 1   MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITL 60

Query: 87  G-SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           G ++SSC GLTGTQ+  C LE AK S+AKGKLK L
Sbjct: 61  GATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL 95

BLAST of Csa7G431400 vs. TrEMBL
Match: A0A0L9VFP9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.0e-32
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 86
           MVLDS+LSSP  +SPSFR+ F  +ELGSWSTLVQRHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLKSPSFRRQFTKDELGSWSTLVQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 87  GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           G+S +C GLTG QKA CH+EL K S+AKGKLKIL
Sbjct: 61  GASGTCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

BLAST of Csa7G431400 vs. TrEMBL
Match: A0A151S136_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029832 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.9e-32
Identity = 73/94 (77.66%), Postives = 80/94 (85.11%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 86
           MVLDS+LSSP  RSPS R+ F  +ELGSWSTLVQRHRFLL+ALVLL  LCT+YLYFAVTL
Sbjct: 1   MVLDSILSSPRLRSPSLRRQFAKDELGSWSTLVQRHRFLLSALVLLAILCTVYLYFAVTL 60

Query: 87  GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           GSS +C GLTG QKA CH+EL K SMAKGKLKIL
Sbjct: 61  GSSGTCSGLTGAQKASCHMELVKDSMAKGKLKIL 94

BLAST of Csa7G431400 vs. TAIR10
Match: AT1G16170.1 (AT1G16170.1 unknown protein)

HSP 1 Score: 114.4 bits (285), Expect = 4.9e-26
Identity = 58/92 (63.04%), Postives = 72/92 (78.26%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 86
           MVLD ++SSP RR    +K + +ELGSWSTL+QRH++LLTAL LL FLCT+YLYFAVTLG
Sbjct: 1   MVLDGLVSSPSRRQQCLKKQW-DELGSWSTLIQRHQYLLTALALLAFLCTVYLYFAVTLG 60

Query: 87  S-SSSCFGLTGTQKAQCHLELAKTSMAKGKLK 118
           +  SSC+GLTG  KA C L+L + +++KGKLK
Sbjct: 61  ARHSSCYGLTGKDKAMCQLQLVQ-ALSKGKLK 90

BLAST of Csa7G431400 vs. TAIR10
Match: AT1G79660.1 (AT1G79660.1 unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 86
           MVLD ++SSP RR  + +K + ++LGS ST+VQRHRFLLTA++LL FLCTIY+YFAVTLG
Sbjct: 1   MVLDGIVSSPLRRPHALKKQW-DDLGSCSTVVQRHRFLLTAMLLLAFLCTIYIYFAVTLG 60

Query: 87  SSS-SCFGLTGTQKAQCHLELAKTSMAKGKLK 118
           +    C G+TG  KA C +E  + S + GKLK
Sbjct: 61  ARHLLCSGMTGKDKAMCQMEHIQASFSNGKLK 91

BLAST of Csa7G431400 vs. NCBI nr
Match: gi|700189975|gb|KGN45208.1| (hypothetical protein Csa_7G431400 [Cucumis sativus])

HSP 1 Score: 241.5 bits (615), Expect = 7.5e-61
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1

Query: 1   MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQR 60
           MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQR
Sbjct: 1   MNFDSVANCLICGVYFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQR 60

Query: 61  HRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           HRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL
Sbjct: 61  HRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

BLAST of Csa7G431400 vs. NCBI nr
Match: gi|659122533|ref|XP_008461194.1| (PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 1

Query: 18  LTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTI 77
           LTEE GSC MVLDSVLSSPHRRSPSFRKSFPNELGSWSTL+QRHRFLLTALVLLTFLCTI
Sbjct: 2   LTEEIGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLMQRHRFLLTALVLLTFLCTI 61

Query: 78  YLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           YLYFAVTLGSSSSC+GLTGTQKAQC LELAKTS+AKGKLKIL
Sbjct: 62  YLYFAVTLGSSSSCYGLTGTQKAQCQLELAKTSIAKGKLKIL 103

BLAST of Csa7G431400 vs. NCBI nr
Match: gi|778728887|ref|XP_011659492.1| (PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 86
           MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG
Sbjct: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60

Query: 87  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 120
           SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL
Sbjct: 61  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 93

BLAST of Csa7G431400 vs. NCBI nr
Match: gi|255543409|ref|XP_002512767.1| (PREDICTED: uncharacterized protein LOC8280287 isoform X1 [Ricinus communis])

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-33
Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 1

Query: 15  YFRLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTF 74
           + RL E      MVLD++LSSPHRRSPSFRK FP +ELGSWSTLVQRHRFLLTALVLL F
Sbjct: 16  FMRLVEGVRLKDMVLDNILSSPHRRSPSFRKQFPRDELGSWSTLVQRHRFLLTALVLLAF 75

Query: 75  LCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLK 118
           LCTIYLYFAVTLG++ SC GLTG QKA C+LELAK+S+ KGK+K
Sbjct: 76  LCTIYLYFAVTLGATGSCSGLTGKQKALCNLELAKSSV-KGKMK 118

BLAST of Csa7G431400 vs. NCBI nr
Match: gi|1000979387|ref|XP_015570687.1| (PREDICTED: uncharacterized protein LOC8280287 isoform X2 [Ricinus communis])

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-32
Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 1

Query: 27  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 86
           MVLD++LSSPHRRSPSFRK FP +ELGSWSTLVQRHRFLLTALVLL FLCTIYLYFAVTL
Sbjct: 1   MVLDNILSSPHRRSPSFRKQFPRDELGSWSTLVQRHRFLLTALVLLAFLCTIYLYFAVTL 60

Query: 87  GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLK 118
           G++ SC GLTG QKA C+LELAK+S+ KGK+K
Sbjct: 61  GATGSCSGLTGKQKALCNLELAKSSV-KGKMK 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K6S1_CUCSA5.2e-61100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1[more]
B9RGQ8_RICCO1.6e-3375.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442830 PE=4 SV=1[more]
A0A0A0L9L6_CUCSA1.0e-3278.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710730 PE=4 SV=1[more]
A0A0L9VFP9_PHAAN3.0e-3276.60Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1[more]
A0A151S136_CAJCA3.9e-3277.66Uncharacterized protein OS=Cajanus cajan GN=KK1_029832 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G16170.14.9e-2663.04 unknown protein[more]
AT1G79660.11.5e-2257.61 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700189975|gb|KGN45208.1|7.5e-61100.00hypothetical protein Csa_7G431400 [Cucumis sativus][more]
gi|659122533|ref|XP_008461194.1|1.4e-4694.12PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo][more]
gi|778728887|ref|XP_011659492.1|2.2e-44100.00PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus][more]
gi|255543409|ref|XP_002512767.1|2.3e-3375.00PREDICTED: uncharacterized protein LOC8280287 isoform X1 [Ricinus communis][more]
gi|1000979387|ref|XP_015570687.1|1.5e-3281.52PREDICTED: uncharacterized protein LOC8280287 isoform X2 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU087453cucumber EST collection version 3.0transcribed_cluster
CU105844cucumber EST collection version 3.0transcribed_cluster
CU152755cucumber EST collection version 3.0transcribed_cluster
CU153627cucumber EST collection version 3.0transcribed_cluster
CU164397cucumber EST collection version 3.0transcribed_cluster
CU166611cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G431400.1Csa7G431400.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU153627CU153627transcribed_cluster
CU166611CU166611transcribed_cluster
CU105844CU105844transcribed_cluster
CU164397CU164397transcribed_cluster
CU152755CU152755transcribed_cluster
CU087453CU087453transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34774FAMILY NOT NAMEDcoord: 28..119
score: 7.7
NoneNo IPR availablePANTHERPTHR34774:SF1SUBFAMILY NOT NAMEDcoord: 28..119
score: 7.7

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa7G431400Csa3G710730Cucumber (Chinese Long) v2cucuB127
The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G431400Melon (DHL92) v3.5.1cumeB521
Csa7G431400Melon (DHL92) v3.5.1cumeB563
Csa7G431400Watermelon (97103) v1cuwmB589
Csa7G431400Melon (DHL92) v3.6.1cumedB540
Csa7G431400Silver-seed gourdcarcuB0387
Csa7G431400Wax gourdcuwgoB704
Csa7G431400Cucumber (Chinese Long) v2cucuB150
Csa7G431400Cucumber (Gy14) v1cgycuB388