Cp4.1LG12g04340 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGCTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTCCCAACCAGGCCGCCTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGTCACAAAATTCTCTCGGCCGCGAACTCCACAAATTCCAAATCCCGCAGCCCCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAATCCGGCAAGGGAGAGAGCAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTGCTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGGTTTGA ATGTGGGCTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTCCCAACCAGGCCGCCTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGTCACAAAATTCTCTCGGCCGCGAACTCCACAAATTCCAAATCCCGCAGCCCCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAATCCGGCAAGGGAGAGAGCAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTGCTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGGTTTGA ATGTGGGCTGCCTTCTCGACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTCCCAACCAGGCCGCCTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGAAACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGTCACAAAATTCTCTCGGCCGCGAACTCCACAAATTCCAAATCCCGCAGCCCCATCCGAAAACAGGAATCGCAATTGGAGACTGCCCAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAATCCGGCAAGGGAGAGAGCAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTGCTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGGTTTGA MWAAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSSSIKSFGHKILSAANSTNSKSRSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRIRQGREQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLAELEKRLQEISETV
BLAST of Cp4.1LG12g04340 vs. TrEMBL
Match: A0A0A0KCJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107890 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37 Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. TrEMBL
Match: B9SVF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0131360 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-06 Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. TAIR10
Match: AT2G46735.1 (AT2G46735.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06 Identity = 56/163 (34.36%), Postives = 73/163 (44.79%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. NCBI nr
Match: gi|659119605|ref|XP_008459744.1| (PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]) HSP 1 Score: 171.4 bits (433), Expect = 1.3e-39 Identity = 104/164 (63.41%), Postives = 120/164 (73.17%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. NCBI nr
Match: gi|778712168|ref|XP_011656857.1| (PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus]) HSP 1 Score: 163.7 bits (413), Expect = 2.7e-37 Identity = 103/166 (62.05%), Postives = 117/166 (70.48%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. NCBI nr
Match: gi|1009142925|ref|XP_015888986.1| (PREDICTED: histone-lysine N-methyltransferase SETD1B-A-like [Ziziphus jujuba]) HSP 1 Score: 67.0 bits (162), Expect = 3.5e-08 Identity = 63/172 (36.63%), Postives = 90/172 (52.33%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. NCBI nr
Match: gi|658019473|ref|XP_008345091.1| (PREDICTED: protein SCARECROW 1-like [Malus domestica]) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07 Identity = 61/167 (36.53%), Postives = 83/167 (49.70%), Query Frame = 1
BLAST of Cp4.1LG12g04340 vs. NCBI nr
Match: gi|223530538|gb|EEF32419.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06 Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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