CmaCh17G013850 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G013850
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 5
Location	Cma_Chr17 : 9238059 .. 9238815 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATGAGAAAGAAGCTGAAATGCAAATTGGGCTTCCAACAGATGTCAAGCATGTTGCCCATATTGGCTGGGATGGTCCTTCTGCCAATAATCCAAGCTGGGTAACATTTTTATTTATTTCACTCCAAAATTGCATCCCATGGAGTTATGATTAAATACGATTTAATAATCCCATGTTGGCTAACTTTTCAGATGAATGAATTTAGTATGGCACCATCGATTACATCTGCTCCTTTTAATCGTTCTACCCGTGCAAACATCAAAGACAAAGACGACGTTTCTACGAAGCAGGCCTCTGAAGGTAAGCTAAACACTTAGGATATTATTTTAGGGTTAAATTAGGGTCTGAGATTTGTGTCTATTTGATCTCACGAATTTATAAAATGGTTTAGATGAAAGCGAAAGTGGAGAAAAGGGTTCAAACAGATCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCGACCAGCCAAGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCTAAGGAGAGCTCCGACAAAAAACAAAGCAGCCCAGGAGGGGAGGCTCAGAATGAGTCGCCCAACTCAAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAGCCACCATGTGTCAGACACCT

mRNA sequence

AGAATGAGAAAGAAGCTGAAATGCAAATTGGGCTTCCAACAGATGTCAAGCATGTTGCCCATATTGGCTGGGATGGTCCTTCTGCCAATAATCCAAGCTGGATGAATGAATTTAGTATGGCACCATCGATTACATCTGCTCCTTTTAATCGTTCTACCCGTGCAAACATCAAAGACAAAGACGACGTTTCTACGAAGCAGGCCTCTGAAGATGAAAGCGAAAGTGGAGAAAAGGGTTCAAACAGATCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCGACCAGCCAAGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCTAAGGAGAGCTCCGACAAAAAACAAAGCAGCCCAGGAGGGGAGGCTCAGAATGAGTCGCCCAACTCAAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAGCCACCATGTGTCAGACACCT

Coding sequence (CDS)

ATGCAAATTGGGCTTCCAACAGATGTCAAGCATGTTGCCCATATTGGCTGGGATGGTCCTTCTGCCAATAATCCAAGCTGGATGAATGAATTTAGTATGGCACCATCGATTACATCTGCTCCTTTTAATCGTTCTACCCGTGCAAACATCAAAGACAAAGACGACGTTTCTACGAAGCAGGCCTCTGAAGATGAAAGCGAAAGTGGAGAAAAGGGTTCAAACAGATCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCGACCAGCCAAGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCTAAGGAGAGCTCCGACAAAAAACAAAGCAGCCCAGGAGGGGAGGCTCAGAATGAGTCGCCCAACTCAAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAGCCACCATGTGTCAGACACCT

Protein sequence

MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLEATMCQTP

Homology

[Close]

BLAST of CmaCh17G013850 vs. Swiss-Prot
Match: RIC6_ARATH (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-10
Identity = 66/152 (43.42%), Postives = 82/152 (53.95%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           +QIG PTDVKHVAHIGWDGPSAN   PSWM EF+      SA            +DD S 
Sbjct: 32  IQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEG--------VGEDDSSI 91

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSE-SPTSQERSERHKARRSSKSKESSDKK 120
           K  SE        G +R     PKS++  +S + SPT  + S++ K RRSS    SS  +
Sbjct: 92  KCMSE------YGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTK-RRSSNKGTSSSSR 151

Query: 121 QSSPGGEAQNE--SPNSSLPDIPRHGRRKKTS 148
           +     E Q+E  S  S LP+IP+  RRKK S
Sbjct: 152 RPKEATEEQDELSSWPSGLPEIPKKSRRKKKS 168

[Close]

BLAST of CmaCh17G013850 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           MQIG PTDVKHVAHIGWDGPS N   PSWMN+F  +P + S             +DD S 
Sbjct: 34  MQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQG--------LGEDDSSV 93

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSK----SKESS 120
           K     +SE G  G  R     PKS++  SS +   ++ERS++ K R S+K    S+ + 
Sbjct: 94  KC----QSEFG--GRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTK 153

Query: 121 DKKQSSPGGEAQNESPNS------SLPDIPRHGRRKKTSRS 150
           D+  +S       +  +S       LP++P+  +RKK+  +
Sbjct: 154 DEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKSKEA 180

[Close]

BLAST of CmaCh17G013850 vs. Swiss-Prot
Match: RIC5_ARATH (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 47/149 (31.54%), Postives = 66/149 (44.30%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG+PTDVKHVAHIGW+GPSA  PSWM++F                   K  D   T+ 
Sbjct: 27  MQIGIPTDVKHVAHIGWEGPSATTPSWMHDF-------------------KPTDQTKTET 86

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSKESSDKKQSS 120
                 + G  G       R  S+ + S +ESP+    S R   R + K +E +    S 
Sbjct: 87  KGTSNKKPGSSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGSGSE 146

Query: 121 PGGEAQNESPNSSLPDIPRHGRRKKTSRS 150
            G   +          +P+  ++KK+  S
Sbjct: 147 SGSGLELPQQTDQFV-VPKQSKQKKSKGS 155

[Close]

BLAST of CmaCh17G013850 vs. Swiss-Prot
Match: RIC9_ARATH (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 1  MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSI----TSAPFNRSTRANIKDKDDV 60
          M+IG PTDV+HV+HIGWD  S++ PSW++EF  + ++    +S PF +  ++ ++   +V
Sbjct: 28 MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVLEPNSSWPF-QDLKSAMEAFGEV 87

Query: 61 STKQASEDES 67
           + +  E ES
Sbjct: 88 ESSKEMERES 96

[Close]

BLAST of CmaCh17G013850 vs. TrEMBL
Match: A0A0A0KF43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34
Identity = 109/200 (54.50%), Postives = 129/200 (64.50%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           M+IG PTDVKHVAHIGWDGPS N+PSWMNEF   PS +SAP   S  A+  +K+DVS K 
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPL--SLHASGDNKEDVSVKW 60

Query: 61  ASEDESE------SGEKGSNRSPDVRPKSSKHRSSS-------ESPTSQER-SERHKARR 120
            SED         S     N + DV  K+SKH SSS       ESPT +ER SER K RR
Sbjct: 61  VSEDRPSRRVAKGSSSSAKNLTADV-TKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 120

Query: 121 SSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPH-AADTYKSSHSDPG 180
           SSKSKE S    ++      N SP  SLPD+PR  RRKKT+R+KPH A +TYKS HSDPG
Sbjct: 121 SSKSKEPSSSDNNN-----NNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPG 180

Query: 181 PNSGTESISVSLEATMCQTP 186
             + T SIS+S ++ +CQTP
Sbjct: 181 STTATGSISLSKDSDLCQTP 192

[Close]

BLAST of CmaCh17G013850 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.2e-17
Identity = 82/192 (42.71%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF         P N         K D S + 
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH-------PNNGDI------KQDASAQC 87

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSS------ESPTSQERSERHKARRSSKSKESS 120
            S+D        S   P++ PKSSK +SS+      ESPT +++SE+ K+++SSK++ESS
Sbjct: 88  VSQDSKRDMAVTSRDMPEL-PKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESS 147

Query: 121 DKKQSSPGGEAQ-----NESPNSSLPDIPRHGRRKKT-------SRSKPHAADTYKSSHS 175
                 P          +ESP  SLP +P+ GRRKK+       SRSK  AA+T  S  S
Sbjct: 148 SSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETCSSQFS 205

[Close]

BLAST of CmaCh17G013850 vs. TrEMBL
Match: B9SV18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-15
Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEF-SMAPSITSAPFNRSTRANIKDKDDVSTK 60
           MQIG PTDVKHVAHIGWDGPS  +PSWMNEF + A   +SAP N    +N + K+D S  
Sbjct: 49  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLN----SNGEPKEDNSIT 108

Query: 61  QASEDESE---SGEKGSNRSPDVRPKSSKHRSSS-----ESPTSQERSERHKARRSSK-- 120
             SED S    S  +G +R     PK+S+  SS+     ESPT ++  +  ++R+SS+  
Sbjct: 109 WVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSRNA 168

Query: 121 SKESSDKKQSSPGGEAQNESPN-SSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNS 180
           +K+ +D K +    +    S + S+LPDIP+  RRKK+       A   K+   D    S
Sbjct: 169 TKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADCGS 228

Query: 181 GTESISVSLEATMCQT 185
            + SIS SL   +C+T
Sbjct: 229 DSGSISNSLNGELCET 240

[Close]

BLAST of CmaCh17G013850 vs. TrEMBL
Match: A0A072VM40_MEDTR (PAK-box/P21-Rho-binding family protein OS=Medicago truncatula GN=MTR_1g069650 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14
Identity = 65/154 (42.21%), Postives = 87/154 (56.49%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           +QIG+PTDVKHVAHIGWDGPS N+PSWMNEF  +P   S P   +  A  K +D  + K 
Sbjct: 28  IQIGVPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPGFASGPMTLTGDAQTKAQDS-TVKW 87

Query: 61  ASEDESESGEKGSNRSPDVR-----PKSSKHRSSSESPTSQERSERHKARRSSKSKESSD 120
            SED      +G N     R     PK S+ + +S    S  R    ++RRSS +K+S+ 
Sbjct: 88  TSEDTKRRSTRGVNSQTQGRDLPELPKGSRRQMNSNITDSPTRERTRQSRRSSANKQSNL 147

Query: 121 KKQSSPGGEAQNESPNS---SLPDIPRHGRRKKT 147
           K  S    ++  +S  S   +LP+IPR  RRKK+
Sbjct: 148 KDSSDGSNDSLIQSDGSQGENLPEIPRKARRKKS 180

[Close]

BLAST of CmaCh17G013850 vs. TrEMBL
Match: A0A0J8ERX5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165230 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13
Identity = 75/183 (40.98%), Postives = 102/183 (55.74%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEF-SMAPSITSAPFNRSTRANIKDKDDVS-T 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF S AP   S+P   +  AN KD +DV+  
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKSPAPGNASSPAQVNGEANNKDAEDVNGV 87

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQER---SERHKARRSSKSKESSD 120
            Q S  +  + +    R     PKSS+ + S ES  S +    S  HK+R  S  +    
Sbjct: 88  SQGSSAKKSTVKDSPGRDLPGLPKSSRRQPSVESIGSADSPMGSPNHKSR--SSRRRHKH 147

Query: 121 KKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSH--SDPGPNSGTESI 177
           K+ +SP GE+ N   + +LP+IP+  RRKK+   +     + +S    S  G   G++  
Sbjct: 148 KEITSPRGESSN---SQTLPNIPKKSRRKKSKDGEGSLKSSSRSKEKGSRNGSRHGSDDG 205

[Close]

BLAST of CmaCh17G013850 vs. TAIR10
Match: AT2G20430.1 (AT2G20430.1 ROP-interactive CRIB motif-containing protein 6)

HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11
Identity = 66/152 (43.42%), Postives = 82/152 (53.95%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           +QIG PTDVKHVAHIGWDGPSAN   PSWM EF+      SA            +DD S 
Sbjct: 32  IQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEG--------VGEDDSSI 91

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSE-SPTSQERSERHKARRSSKSKESSDKK 120
           K  SE        G +R     PKS++  +S + SPT  + S++ K RRSS    SS  +
Sbjct: 92  KCMSE------YGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTK-RRSSNKGTSSSSR 151

Query: 121 QSSPGGEAQNE--SPNSSLPDIPRHGRRKKTS 148
           +     E Q+E  S  S LP+IP+  RRKK S
Sbjct: 152 RPKEATEEQDELSSWPSGLPEIPKKSRRKKKS 168

[Close]

BLAST of CmaCh17G013850 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           MQIG PTDVKHVAHIGWDGPS N   PSWMN+F  +P + S             +DD S 
Sbjct: 34  MQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQG--------LGEDDSSV 93

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSK----SKESS 120
           K     +SE G  G  R     PKS++  SS +   ++ERS++ K R S+K    S+ + 
Sbjct: 94  KC----QSEFG--GRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTK 153

Query: 121 DKKQSSPGGEAQNESPNS------SLPDIPRHGRRKKTSRS 150
           D+  +S       +  +S       LP++P+  +RKK+  +
Sbjct: 154 DEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKSKEA 180

[Close]

BLAST of CmaCh17G013850 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 47/149 (31.54%), Postives = 66/149 (44.30%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG+PTDVKHVAHIGW+GPSA  PSWM++F                   K  D   T+ 
Sbjct: 27  MQIGIPTDVKHVAHIGWEGPSATTPSWMHDF-------------------KPTDQTKTET 86

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSKESSDKKQSS 120
                 + G  G       R  S+ + S +ESP+    S R   R + K +E +    S 
Sbjct: 87  KGTSNKKPGSSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGSGSE 146

Query: 121 PGGEAQNESPNSSLPDIPRHGRRKKTSRS 150
            G   +          +P+  ++KK+  S
Sbjct: 147 SGSGLELPQQTDQFV-VPKQSKQKKSKGS 155

[Close]

BLAST of CmaCh17G013850 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 1  MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSI----TSAPFNRSTRANIKDKDDV 60
          M+IG PTDV+HV+HIGWD  S++ PSW++EF  + ++    +S PF +  ++ ++   +V
Sbjct: 28 MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVLEPNSSWPF-QDLKSAMEAFGEV 87

Query: 61 STKQASEDES 67
           + +  E ES
Sbjct: 88 ESSKEMERES 96

[Close]

BLAST of CmaCh17G013850 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10)

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           ++IG PTDVKHVAHIGW+G S + P WM+EF +   + S     S+ +N +      T  
Sbjct: 28  IEIGFPTDVKHVAHIGWEGSSGSAPGWMSEFKVGAELLSP--RPSSFSNARPSTSFFTSS 87

Query: 61  ASED-ESESGEKGSNR--------SPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSK 114
           +S D +  S ++G +         +P   PK++K +SS    +S   S    +R S  SK
Sbjct: 88  SSTDFDQGSSQRGISDTLRDIPPVTPINLPKNNKKKSSRRKKSSSSSSSPKSSRSSVLSK 147

[Close]

BLAST of CmaCh17G013850 vs. NCBI nr
Match: gi|700191182|gb|KGN46386.1| (hypothetical protein Csa_6G088140 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 109/200 (54.50%), Postives = 129/200 (64.50%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           M+IG PTDVKHVAHIGWDGPS N+PSWMNEF   PS +SAP   S  A+  +K+DVS K 
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPL--SLHASGDNKEDVSVKW 60

Query: 61  ASEDESE------SGEKGSNRSPDVRPKSSKHRSSS-------ESPTSQER-SERHKARR 120
            SED         S     N + DV  K+SKH SSS       ESPT +ER SER K RR
Sbjct: 61  VSEDRPSRRVAKGSSSSAKNLTADV-TKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 120

Query: 121 SSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPH-AADTYKSSHSDPG 180
           SSKSKE S    ++      N SP  SLPD+PR  RRKKT+R+KPH A +TYKS HSDPG
Sbjct: 121 SSKSKEPSSSDNNN-----NNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPG 180

Query: 181 PNSGTESISVSLEATMCQTP 186
             + T SIS+S ++ +CQTP
Sbjct: 181 STTATGSISLSKDSDLCQTP 192

[Close]

BLAST of CmaCh17G013850 vs. NCBI nr
Match: gi|659120438|ref|XP_008460194.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34
Identity = 112/203 (55.17%), Postives = 133/203 (65.52%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF   PS +SAP   S  A   +K+DVS K 
Sbjct: 1   MQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPL--SLPAPGDNKEDVSVKG 60

Query: 61  ASEDESESGEKGSNRS-------PDVRPKSSKHRSSS-------ESPTSQER-SERHKAR 120
            SED S   EKG + S        DV  K+SKH SSS       +SPT +ER SER K R
Sbjct: 61  VSEDRSRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRERSSERQKTR 120

Query: 121 RSSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHG-RRKKTSRSKPH-AADTYKSSHSD 180
           RSSKSKESS    ++      N SP  SLPD+PR   RRKKT+R+KPH A +TYKS +SD
Sbjct: 121 RSSKSKESSSSSDNN-----NNHSPTLSLPDVPRQNPRRKKTTRTKPHLAPETYKSPYSD 180

Query: 181 PGPN-SGTESISVSLEATMCQTP 186
           PG + + T+SIS+S +  +CQTP
Sbjct: 181 PGASTTATDSISLSKDTDLCQTP 196

[Close]

BLAST of CmaCh17G013850 vs. NCBI nr
Match: gi|778680973|ref|XP_011651433.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 82/192 (42.71%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF         P N         K D S + 
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH-------PNNGDI------KQDASAQC 87

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSS------ESPTSQERSERHKARRSSKSKESS 120
            S+D        S   P++ PKSSK +SS+      ESPT +++SE+ K+++SSK++ESS
Sbjct: 88  VSQDSKRDMAVTSRDMPEL-PKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESS 147

Query: 121 DKKQSSPGGEAQ-----NESPNSSLPDIPRHGRRKKT-------SRSKPHAADTYKSSHS 175
                 P          +ESP  SLP +P+ GRRKK+       SRSK  AA+T  S  S
Sbjct: 148 SSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETCSSQFS 205

[Close]

BLAST of CmaCh17G013850 vs. NCBI nr
Match: gi|1009147153|ref|XP_015891261.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Ziziphus jujuba])

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15
Identity = 87/201 (43.28%), Postives = 120/201 (59.70%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF      +SAP   +   ++KD D  S ++
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKSPQGFSSAPLGLT--GDMKD-DANSGQK 87

Query: 61  ASEDESESGEKGSNRSPDV--RPKSSKHRS---SSESPTSQERSERHKARRSSK--SKES 120
            SED +    + ++ S D+   PKSS+  S   S +SPT +E++ER + RRSSK  +++S
Sbjct: 88  ISEDPNRRSARNNSGSRDLPELPKSSRRHSAGGSVDSPT-KEKTERTRQRRSSKNSNRDS 147

Query: 121 SDKKQS------SPGGEAQNESPN-SSLPDIPRHGRRKKT------------SRS-KPHA 172
           +D  ++      S      +ESP+  S PDIP+  RRKK+            SRS KP  
Sbjct: 148 TDSPKAPKPTRLSLDSSLGSESPSRHSGPDIPKKTRRKKSKDTTGGGGSSSRSRSTKPPI 207

[Close]

BLAST of CmaCh17G013850 vs. NCBI nr
Match: gi|223530665|gb|EEF32538.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15
Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEF-SMAPSITSAPFNRSTRANIKDKDDVSTK 60
           MQIG PTDVKHVAHIGWDGPS  +PSWMNEF + A   +SAP N    +N + K+D S  
Sbjct: 49  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLN----SNGEPKEDNSIT 108

Query: 61  QASEDESE---SGEKGSNRSPDVRPKSSKHRSSS-----ESPTSQERSERHKARRSSK-- 120
             SED S    S  +G +R     PK+S+  SS+     ESPT ++  +  ++R+SS+  
Sbjct: 109 WVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSRNA 168

Query: 121 SKESSDKKQSSPGGEAQNESPN-SSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNS 180
           +K+ +D K +    +    S + S+LPDIP+  RRKK+       A   K+   D    S
Sbjct: 169 TKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADCGS 228

Query: 181 GTESISVSLEATMCQT 185
            + SIS SL   +C+T
Sbjct: 229 DSGSISNSLNGELCET 240

The following BLAST results are available for this feature:

BLAST of CmaCh17G013850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC6_ARATH	7.1e-10	43.42	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1	[more]
RIC7_ARATH	3.5e-09	37.27	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1	[more]
RIC5_ARATH	6.3e-06	31.54	CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1	[more]
RIC9_ARATH	6.3e-06	38.57	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1	[more]

BLAST of CmaCh17G013850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF43_CUCSA	1.0e-34	54.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1	[more]
A0A0A0L7D1_CUCSA	7.2e-17	42.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1	[more]
B9SV18_RICCO	3.9e-15	40.82	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1	[more]
A0A072VM40_MEDTR	1.5e-14	42.21	PAK-box/P21-Rho-binding family protein OS=Medicago truncatula GN=MTR_1g069650 PE...	[more]
A0A0J8ERX5_BETVU	2.2e-13	40.98	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165230 PE=4 S...	[more]

BLAST of CmaCh17G013850 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20430.1	4.0e-11	43.42	ROP-interactive CRIB motif-containing protein 6	[more]
AT4G28556.1	2.0e-10	37.27	PAK-box/P21-Rho-binding family protein	[more]
AT3G23380.1	3.5e-07	31.54	ROP-interactive CRIB motif-containing protein 5	[more]
AT1G61795.1	3.5e-07	38.57	PAK-box/P21-Rho-binding family protein	[more]
AT4G04900.1	6.6e-06	34.43	ROP-interactive CRIB motif-containing protein 10	[more]

BLAST of CmaCh17G013850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191182\|gb\|KGN46386.1\|	1.4e-34	54.50	hypothetical protein Csa_6G088140 [Cucumis sativus]	[more]
gi\|659120438\|ref\|XP_008460194.1\|	1.9e-34	55.17	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]	[more]
gi\|778680973\|ref\|XP_011651433.1\|	1.0e-16	42.71	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus]	[more]
gi\|1009147153\|ref\|XP_015891261.1\|	1.9e-15	43.28	PREDICTED: CRIB domain-containing protein RIC6-like [Ziziphus jujuba]	[more]
gi\|223530665\|gb\|EEF32538.1\|	5.6e-15	40.82	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G013850.1	CmaCh17G013850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 1..42 score: 3.7
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 2..44 score: 8.6
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 3..34 score: 6.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 3..16 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..114 score: 4.1
None	No IPR available	PANTHER	PTHR23177:SF8	CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED	coord: 1..114 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G013850	Cucsa.349000	Cucumber (Gy14) v1	cgycmaB0951
CmaCh17G013850	Csa6G088140	Cucumber (Chinese Long) v2	cmacuB367
CmaCh17G013850	MELO3C022379	Melon (DHL92) v3.5.1	cmameB315
CmaCh17G013850	ClCG06G001550	Watermelon (Charleston Gray)	cmawcgB322
CmaCh17G013850	CSPI06G07120	Wild cucumber (PI 183967)	cmacpiB371
CmaCh17G013850	CmoCh17G013380	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G013850	Lsi09G017900	Bottle gourd (USVL1VR-Ls)	cmalsiB333
CmaCh17G013850	Cp4.1LG17g09430	Cucurbita pepo (Zucchini)	cmacpeB389
CmaCh17G013850	Cp4.1LG12g10050	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G013850	MELO3C022379.2	Melon (DHL92) v3.6.1	cmamedB367
CmaCh17G013850	CsaV3_6G007520	Cucumber (Chinese Long) v3	cmacucB0439
CmaCh17G013850	CsaV3_3G011950	Cucumber (Chinese Long) v3	cmacucB0429
CmaCh17G013850	Cla97C06G110830	Watermelon (97103) v2	cmawmbB369
CmaCh17G013850	CsGy6G007130	Cucumber (Gy14) v2	cgybcmaB751
CmaCh17G013850	Carg03793	Silver-seed gourd	carcmaB1351
CmaCh17G013850	Carg11549	Silver-seed gourd	carcmaB0020

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G013850	Wax gourd	cmawgoB0456
CmaCh17G013850	Cucurbita maxima (Rimu)	cmacmaB384
CmaCh17G013850	Cucurbita moschata (Rifu)	cmacmoB376
CmaCh17G013850	Watermelon (97103) v1	cmawmB352