CmaCh17G013850.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G013850.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ROP-INTERACTIVE CRIB MOTIF-CONTAINING protein 5
Location	Cma_Chr17 : 9238059 .. 9238815 (-)
Sequence length	575

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATGAGAAAGAAGCTGAAATGCAAATTGGGCTTCCAACAGATGTCAAGCATGTTGCCCATATTGGCTGGGATGGTCCTTCTGCCAATAATCCAAGCTGGGTAACATTTTTATTTATTTCACTCCAAAATTGCATCCCATGGAGTTATGATTAAATACGATTTAATAATCCCATGTTGGCTAACTTTTCAGATGAATGAATTTAGTATGGCACCATCGATTACATCTGCTCCTTTTAATCGTTCTACCCGTGCAAACATCAAAGACAAAGACGACGTTTCTACGAAGCAGGCCTCTGAAGGTAAGCTAAACACTTAGGATATTATTTTAGGGTTAAATTAGGGTCTGAGATTTGTGTCTATTTGATCTCACGAATTTATAAAATGGTTTAGATGAAAGCGAAAGTGGAGAAAAGGGTTCAAACAGATCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCGACCAGCCAAGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCTAAGGAGAGCTCCGACAAAAAACAAAGCAGCCCAGGAGGGGAGGCTCAGAATGAGTCGCCCAACTCAAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAGCCACCATGTGTCAGACACCT

mRNA sequence

AGAATGAGAAAGAAGCTGAAATGCAAATTGGGCTTCCAACAGATGTCAAGCATGTTGCCCATATTGGCTGGGATGGTCCTTCTGCCAATAATCCAAGCTGGATGAATGAATTTAGTATGGCACCATCGATTACATCTGCTCCTTTTAATCGTTCTACCCGTGCAAACATCAAAGACAAAGACGACGTTTCTACGAAGCAGGCCTCTGAAGATGAAAGCGAAAGTGGAGAAAAGGGTTCAAACAGATCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCGACCAGCCAAGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCTAAGGAGAGCTCCGACAAAAAACAAAGCAGCCCAGGAGGGGAGGCTCAGAATGAGTCGCCCAACTCAAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAGCCACCATGTGTCAGACACCT

Coding sequence (CDS)

ATGCAAATTGGGCTTCCAACAGATGTCAAGCATGTTGCCCATATTGGCTGGGATGGTCCTTCTGCCAATAATCCAAGCTGGATGAATGAATTTAGTATGGCACCATCGATTACATCTGCTCCTTTTAATCGTTCTACCCGTGCAAACATCAAAGACAAAGACGACGTTTCTACGAAGCAGGCCTCTGAAGATGAAAGCGAAAGTGGAGAAAAGGGTTCAAACAGATCGCCGGACGTGCGGCCTAAATCATCAAAACACCGGTCGTCAAGTGAGTCTCCGACCAGCCAAGAAAGATCAGAGAGACACAAAGCAAGACGGTCTTCCAAGTCTAAGGAGAGCTCCGACAAAAAACAAAGCAGCCCAGGAGGGGAGGCTCAGAATGAGTCGCCCAACTCAAGCCTCCCAGACATCCCAAGACACGGGCGGCGGAAGAAAACGAGCAGATCCAAGCCCCATGCTGCGGATACATACAAGTCCTCGCATTCGGATCCTGGTCCCAACTCTGGAACGGAATCCATATCTGTATCCCTGGAAGCCACCATGTGTCAGACACCT

Protein sequence

MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNSGTESISVSLEATMCQTP

Homology

[Close]

BLAST of CmaCh17G013850.1 vs. Swiss-Prot
Match: RIC6_ARATH (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-10
Identity = 66/152 (43.42%), Postives = 82/152 (53.95%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           +QIG PTDVKHVAHIGWDGPSAN   PSWM EF+      SA            +DD S 
Sbjct: 32  IQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEG--------VGEDDSSI 91

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSE-SPTSQERSERHKARRSSKSKESSDKK 120
           K  SE        G +R     PKS++  +S + SPT  + S++ K RRSS    SS  +
Sbjct: 92  KCMSE------YGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTK-RRSSNKGTSSSSR 151

Query: 121 QSSPGGEAQNE--SPNSSLPDIPRHGRRKKTS 148
           +     E Q+E  S  S LP+IP+  RRKK S
Sbjct: 152 RPKEATEEQDELSSWPSGLPEIPKKSRRKKKS 168

[Close]

BLAST of CmaCh17G013850.1 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           MQIG PTDVKHVAHIGWDGPS N   PSWMN+F  +P + S             +DD S 
Sbjct: 34  MQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQG--------LGEDDSSV 93

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSK----SKESS 120
           K     +SE G  G  R     PKS++  SS +   ++ERS++ K R S+K    S+ + 
Sbjct: 94  KC----QSEFG--GRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTK 153

Query: 121 DKKQSSPGGEAQNESPNS------SLPDIPRHGRRKKTSRS 150
           D+  +S       +  +S       LP++P+  +RKK+  +
Sbjct: 154 DEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKSKEA 180

[Close]

BLAST of CmaCh17G013850.1 vs. Swiss-Prot
Match: RIC5_ARATH (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 47/149 (31.54%), Postives = 66/149 (44.30%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG+PTDVKHVAHIGW+GPSA  PSWM++F                   K  D   T+ 
Sbjct: 27  MQIGIPTDVKHVAHIGWEGPSATTPSWMHDF-------------------KPTDQTKTET 86

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSKESSDKKQSS 120
                 + G  G       R  S+ + S +ESP+    S R   R + K +E +    S 
Sbjct: 87  KGTSNKKPGSSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGSGSE 146

Query: 121 PGGEAQNESPNSSLPDIPRHGRRKKTSRS 150
            G   +          +P+  ++KK+  S
Sbjct: 147 SGSGLELPQQTDQFV-VPKQSKQKKSKGS 155

[Close]

BLAST of CmaCh17G013850.1 vs. Swiss-Prot
Match: RIC9_ARATH (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 1  MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSI----TSAPFNRSTRANIKDKDDV 60
          M+IG PTDV+HV+HIGWD  S++ PSW++EF  + ++    +S PF +  ++ ++   +V
Sbjct: 28 MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVLEPNSSWPF-QDLKSAMEAFGEV 87

Query: 61 STKQASEDES 67
           + +  E ES
Sbjct: 88 ESSKEMERES 96

[Close]

BLAST of CmaCh17G013850.1 vs. TrEMBL
Match: A0A0A0KF43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34
Identity = 109/200 (54.50%), Postives = 129/200 (64.50%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           M+IG PTDVKHVAHIGWDGPS N+PSWMNEF   PS +SAP   S  A+  +K+DVS K 
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPL--SLHASGDNKEDVSVKW 60

Query: 61  ASEDESE------SGEKGSNRSPDVRPKSSKHRSSS-------ESPTSQER-SERHKARR 120
            SED         S     N + DV  K+SKH SSS       ESPT +ER SER K RR
Sbjct: 61  VSEDRPSRRVAKGSSSSAKNLTADV-TKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 120

Query: 121 SSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPH-AADTYKSSHSDPG 180
           SSKSKE S    ++      N SP  SLPD+PR  RRKKT+R+KPH A +TYKS HSDPG
Sbjct: 121 SSKSKEPSSSDNNN-----NNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPG 180

Query: 181 PNSGTESISVSLEATMCQTP 186
             + T SIS+S ++ +CQTP
Sbjct: 181 STTATGSISLSKDSDLCQTP 192

[Close]

BLAST of CmaCh17G013850.1 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 7.2e-17
Identity = 82/192 (42.71%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF         P N         K D S + 
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH-------PNNGDI------KQDASAQC 87

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSS------ESPTSQERSERHKARRSSKSKESS 120
            S+D        S   P++ PKSSK +SS+      ESPT +++SE+ K+++SSK++ESS
Sbjct: 88  VSQDSKRDMAVTSRDMPEL-PKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESS 147

Query: 121 DKKQSSPGGEAQ-----NESPNSSLPDIPRHGRRKKT-------SRSKPHAADTYKSSHS 175
                 P          +ESP  SLP +P+ GRRKK+       SRSK  AA+T  S  S
Sbjct: 148 SSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETCSSQFS 205

[Close]

BLAST of CmaCh17G013850.1 vs. TrEMBL
Match: B9SV18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-15
Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEF-SMAPSITSAPFNRSTRANIKDKDDVSTK 60
           MQIG PTDVKHVAHIGWDGPS  +PSWMNEF + A   +SAP N    +N + K+D S  
Sbjct: 49  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLN----SNGEPKEDNSIT 108

Query: 61  QASEDESE---SGEKGSNRSPDVRPKSSKHRSSS-----ESPTSQERSERHKARRSSK-- 120
             SED S    S  +G +R     PK+S+  SS+     ESPT ++  +  ++R+SS+  
Sbjct: 109 WVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSRNA 168

Query: 121 SKESSDKKQSSPGGEAQNESPN-SSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNS 180
           +K+ +D K +    +    S + S+LPDIP+  RRKK+       A   K+   D    S
Sbjct: 169 TKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADCGS 228

Query: 181 GTESISVSLEATMCQT 185
            + SIS SL   +C+T
Sbjct: 229 DSGSISNSLNGELCET 240

[Close]

BLAST of CmaCh17G013850.1 vs. TrEMBL
Match: A0A072VM40_MEDTR (PAK-box/P21-Rho-binding family protein OS=Medicago truncatula GN=MTR_1g069650 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14
Identity = 65/154 (42.21%), Postives = 87/154 (56.49%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           +QIG+PTDVKHVAHIGWDGPS N+PSWMNEF  +P   S P   +  A  K +D  + K 
Sbjct: 28  IQIGVPTDVKHVAHIGWDGPSVNSPSWMNEFKTSPGFASGPMTLTGDAQTKAQDS-TVKW 87

Query: 61  ASEDESESGEKGSNRSPDVR-----PKSSKHRSSSESPTSQERSERHKARRSSKSKESSD 120
            SED      +G N     R     PK S+ + +S    S  R    ++RRSS +K+S+ 
Sbjct: 88  TSEDTKRRSTRGVNSQTQGRDLPELPKGSRRQMNSNITDSPTRERTRQSRRSSANKQSNL 147

Query: 121 KKQSSPGGEAQNESPNS---SLPDIPRHGRRKKT 147
           K  S    ++  +S  S   +LP+IPR  RRKK+
Sbjct: 148 KDSSDGSNDSLIQSDGSQGENLPEIPRKARRKKS 180

[Close]

BLAST of CmaCh17G013850.1 vs. TrEMBL
Match: A0A0J8ERX5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165230 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13
Identity = 75/183 (40.98%), Postives = 102/183 (55.74%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEF-SMAPSITSAPFNRSTRANIKDKDDVS-T 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF S AP   S+P   +  AN KD +DV+  
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKSPAPGNASSPAQVNGEANNKDAEDVNGV 87

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQER---SERHKARRSSKSKESSD 120
            Q S  +  + +    R     PKSS+ + S ES  S +    S  HK+R  S  +    
Sbjct: 88  SQGSSAKKSTVKDSPGRDLPGLPKSSRRQPSVESIGSADSPMGSPNHKSR--SSRRRHKH 147

Query: 121 KKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPHAADTYKSSH--SDPGPNSGTESI 177
           K+ +SP GE+ N   + +LP+IP+  RRKK+   +     + +S    S  G   G++  
Sbjct: 148 KEITSPRGESSN---SQTLPNIPKKSRRKKSKDGEGSLKSSSRSKEKGSRNGSRHGSDDG 205

[Close]

BLAST of CmaCh17G013850.1 vs. TAIR10
Match: AT2G20430.1 (AT2G20430.1 ROP-interactive CRIB motif-containing protein 6)

HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11
Identity = 66/152 (43.42%), Postives = 82/152 (53.95%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           +QIG PTDVKHVAHIGWDGPSAN   PSWM EF+      SA            +DD S 
Sbjct: 32  IQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFESAEG--------VGEDDSSI 91

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSE-SPTSQERSERHKARRSSKSKESSDKK 120
           K  SE        G +R     PKS++  +S + SPT  + S++ K RRSS    SS  +
Sbjct: 92  KCMSE------YGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTK-RRSSNKGTSSSSR 151

Query: 121 QSSPGGEAQNE--SPNSSLPDIPRHGRRKKTS 148
           +     E Q+E  S  S LP+IP+  RRKK S
Sbjct: 152 RPKEATEEQDELSSWPSGLPEIPKKSRRKKKS 168

[Close]

BLAST of CmaCh17G013850.1 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANN--PSWMNEFSMAPSITSAPFNRSTRANIKDKDDVST 60
           MQIG PTDVKHVAHIGWDGPS N   PSWMN+F  +P + S             +DD S 
Sbjct: 34  MQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQG--------LGEDDSSV 93

Query: 61  KQASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSK----SKESS 120
           K     +SE G  G  R     PKS++  SS +   ++ERS++ K R S+K    S+ + 
Sbjct: 94  KC----QSEFG--GRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTK 153

Query: 121 DKKQSSPGGEAQNESPNS------SLPDIPRHGRRKKTSRS 150
           D+  +S       +  +S       LP++P+  +RKK+  +
Sbjct: 154 DEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKSKEA 180

[Close]

BLAST of CmaCh17G013850.1 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 47/149 (31.54%), Postives = 66/149 (44.30%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG+PTDVKHVAHIGW+GPSA  PSWM++F                   K  D   T+ 
Sbjct: 27  MQIGIPTDVKHVAHIGWEGPSATTPSWMHDF-------------------KPTDQTKTET 86

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSKESSDKKQSS 120
                 + G  G       R  S+ + S +ESP+    S R   R + K +E +    S 
Sbjct: 87  KGTSNKKPGSSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGSGSE 146

Query: 121 PGGEAQNESPNSSLPDIPRHGRRKKTSRS 150
            G   +          +P+  ++KK+  S
Sbjct: 147 SGSGLELPQQTDQFV-VPKQSKQKKSKGS 155

[Close]

BLAST of CmaCh17G013850.1 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 1  MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSI----TSAPFNRSTRANIKDKDDV 60
          M+IG PTDV+HV+HIGWD  S++ PSW++EF  + ++    +S PF +  ++ ++   +V
Sbjct: 28 MEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVLEPNSSWPF-QDLKSAMEAFGEV 87

Query: 61 STKQASEDES 67
           + +  E ES
Sbjct: 88 ESSKEMERES 96

[Close]

BLAST of CmaCh17G013850.1 vs. TAIR10
Match: AT4G04900.1 (AT4G04900.1 ROP-interactive CRIB motif-containing protein 10)

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           ++IG PTDVKHVAHIGW+G S + P WM+EF +   + S     S+ +N +      T  
Sbjct: 28  IEIGFPTDVKHVAHIGWEGSSGSAPGWMSEFKVGAELLSP--RPSSFSNARPSTSFFTSS 87

Query: 61  ASED-ESESGEKGSNR--------SPDVRPKSSKHRSSSESPTSQERSERHKARRSSKSK 114
           +S D +  S ++G +         +P   PK++K +SS    +S   S    +R S  SK
Sbjct: 88  SSTDFDQGSSQRGISDTLRDIPPVTPINLPKNNKKKSSRRKKSSSSSSSPKSSRSSVLSK 147

[Close]

BLAST of CmaCh17G013850.1 vs. NCBI nr
Match: gi|700191182|gb|KGN46386.1| (hypothetical protein Csa_6G088140 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 109/200 (54.50%), Postives = 129/200 (64.50%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           M+IG PTDVKHVAHIGWDGPS N+PSWMNEF   PS +SAP   S  A+  +K+DVS K 
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPL--SLHASGDNKEDVSVKW 60

Query: 61  ASEDESE------SGEKGSNRSPDVRPKSSKHRSSS-------ESPTSQER-SERHKARR 120
            SED         S     N + DV  K+SKH SSS       ESPT +ER SER K RR
Sbjct: 61  VSEDRPSRRVAKGSSSSAKNLTADV-TKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 120

Query: 121 SSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHGRRKKTSRSKPH-AADTYKSSHSDPG 180
           SSKSKE S    ++      N SP  SLPD+PR  RRKKT+R+KPH A +TYKS HSDPG
Sbjct: 121 SSKSKEPSSSDNNN-----NNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPG 180

Query: 181 PNSGTESISVSLEATMCQTP 186
             + T SIS+S ++ +CQTP
Sbjct: 181 STTATGSISLSKDSDLCQTP 192

[Close]

BLAST of CmaCh17G013850.1 vs. NCBI nr
Match: gi|659120438|ref|XP_008460194.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34
Identity = 112/203 (55.17%), Postives = 133/203 (65.52%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF   PS +SAP   S  A   +K+DVS K 
Sbjct: 1   MQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPL--SLPAPGDNKEDVSVKG 60

Query: 61  ASEDESESGEKGSNRS-------PDVRPKSSKHRSSS-------ESPTSQER-SERHKAR 120
            SED S   EKG + S        DV  K+SKH SSS       +SPT +ER SER K R
Sbjct: 61  VSEDRSRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRERSSERQKTR 120

Query: 121 RSSKSKESSDKKQSSPGGEAQNESPNSSLPDIPRHG-RRKKTSRSKPH-AADTYKSSHSD 180
           RSSKSKESS    ++      N SP  SLPD+PR   RRKKT+R+KPH A +TYKS +SD
Sbjct: 121 RSSKSKESSSSSDNN-----NNHSPTLSLPDVPRQNPRRKKTTRTKPHLAPETYKSPYSD 180

Query: 181 PGPN-SGTESISVSLEATMCQTP 186
           PG + + T+SIS+S +  +CQTP
Sbjct: 181 PGASTTATDSISLSKDTDLCQTP 196

[Close]

BLAST of CmaCh17G013850.1 vs. NCBI nr
Match: gi|778680973|ref|XP_011651433.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16
Identity = 82/192 (42.71%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF         P N         K D S + 
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH-------PNNGDI------KQDASAQC 87

Query: 61  ASEDESESGEKGSNRSPDVRPKSSKHRSSS------ESPTSQERSERHKARRSSKSKESS 120
            S+D        S   P++ PKSSK +SS+      ESPT +++SE+ K+++SSK++ESS
Sbjct: 88  VSQDSKRDMAVTSRDMPEL-PKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESS 147

Query: 121 DKKQSSPGGEAQ-----NESPNSSLPDIPRHGRRKKT-------SRSKPHAADTYKSSHS 175
                 P          +ESP  SLP +P+ GRRKK+       SRSK  AA+T  S  S
Sbjct: 148 SSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETCSSQFS 205

[Close]

BLAST of CmaCh17G013850.1 vs. NCBI nr
Match: gi|1009147153|ref|XP_015891261.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Ziziphus jujuba])

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15
Identity = 87/201 (43.28%), Postives = 120/201 (59.70%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEFSMAPSITSAPFNRSTRANIKDKDDVSTKQ 60
           MQIG PTDVKHVAHIGWDGPS N+PSWMNEF      +SAP   +   ++KD D  S ++
Sbjct: 28  MQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKSPQGFSSAPLGLT--GDMKD-DANSGQK 87

Query: 61  ASEDESESGEKGSNRSPDV--RPKSSKHRS---SSESPTSQERSERHKARRSSK--SKES 120
            SED +    + ++ S D+   PKSS+  S   S +SPT +E++ER + RRSSK  +++S
Sbjct: 88  ISEDPNRRSARNNSGSRDLPELPKSSRRHSAGGSVDSPT-KEKTERTRQRRSSKNSNRDS 147

Query: 121 SDKKQS------SPGGEAQNESPN-SSLPDIPRHGRRKKT------------SRS-KPHA 172
           +D  ++      S      +ESP+  S PDIP+  RRKK+            SRS KP  
Sbjct: 148 TDSPKAPKPTRLSLDSSLGSESPSRHSGPDIPKKTRRKKSKDTTGGGGSSSRSRSTKPPI 207

[Close]

BLAST of CmaCh17G013850.1 vs. NCBI nr
Match: gi|223530665|gb|EEF32538.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 89.7 bits (221), Expect = 5.6e-15
Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 1


Query: 1   MQIGLPTDVKHVAHIGWDGPSANNPSWMNEF-SMAPSITSAPFNRSTRANIKDKDDVSTK 60
           MQIG PTDVKHVAHIGWDGPS  +PSWMNEF + A   +SAP N    +N + K+D S  
Sbjct: 49  MQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLN----SNGEPKEDNSIT 108

Query: 61  QASEDESE---SGEKGSNRSPDVRPKSSKHRSSS-----ESPTSQERSERHKARRSSK-- 120
             SED S    S  +G +R     PK+S+  SS+     ESPT ++  +  ++R+SS+  
Sbjct: 109 WVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSRNA 168

Query: 121 SKESSDKKQSSPGGEAQNESPN-SSLPDIPRHGRRKKTSRSKPHAADTYKSSHSDPGPNS 180
           +K+ +D K +    +    S + S+LPDIP+  RRKK+       A   K+   D    S
Sbjct: 169 TKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADCGS 228

Query: 181 GTESISVSLEATMCQT 185
            + SIS SL   +C+T
Sbjct: 229 DSGSISNSLNGELCET 240

The following BLAST results are available for this feature:

BLAST of CmaCh17G013850.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC6_ARATH	7.1e-10	43.42	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1	[more]
RIC7_ARATH	3.5e-09	37.27	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1	[more]
RIC5_ARATH	6.3e-06	31.54	CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1	[more]
RIC9_ARATH	6.3e-06	38.57	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1	[more]

BLAST of CmaCh17G013850.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF43_CUCSA	1.0e-34	54.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1	[more]
A0A0A0L7D1_CUCSA	7.2e-17	42.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1	[more]
B9SV18_RICCO	3.9e-15	40.82	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1	[more]
A0A072VM40_MEDTR	1.5e-14	42.21	PAK-box/P21-Rho-binding family protein OS=Medicago truncatula GN=MTR_1g069650 PE...	[more]
A0A0J8ERX5_BETVU	2.2e-13	40.98	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g165230 PE=4 S...	[more]

BLAST of CmaCh17G013850.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20430.1	4.0e-11	43.42	ROP-interactive CRIB motif-containing protein 6	[more]
AT4G28556.1	2.0e-10	37.27	PAK-box/P21-Rho-binding family protein	[more]
AT3G23380.1	3.5e-07	31.54	ROP-interactive CRIB motif-containing protein 5	[more]
AT1G61795.1	3.5e-07	38.57	PAK-box/P21-Rho-binding family protein	[more]
AT4G04900.1	6.6e-06	34.43	ROP-interactive CRIB motif-containing protein 10	[more]

BLAST of CmaCh17G013850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191182\|gb\|KGN46386.1\|	1.4e-34	54.50	hypothetical protein Csa_6G088140 [Cucumis sativus]	[more]
gi\|659120438\|ref\|XP_008460194.1\|	1.9e-34	55.17	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]	[more]
gi\|778680973\|ref\|XP_011651433.1\|	1.0e-16	42.71	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus]	[more]
gi\|1009147153\|ref\|XP_015891261.1\|	1.9e-15	43.28	PREDICTED: CRIB domain-containing protein RIC6-like [Ziziphus jujuba]	[more]
gi\|223530665\|gb\|EEF32538.1\|	5.6e-15	40.82	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G013850	CmaCh17G013850	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G013850.1	CmaCh17G013850.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G013850.1.CDS.3	CmaCh17G013850.1.CDS.3	CDS
CmaCh17G013850.1.CDS.2	CmaCh17G013850.1.CDS.2	CDS
CmaCh17G013850.1.CDS.1	CmaCh17G013850.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G013850.1.five_prime_UTR.1	CmaCh17G013850.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G013850.1.exon.3	CmaCh17G013850.1.exon.3	exon
CmaCh17G013850.1.exon.2	CmaCh17G013850.1.exon.2	exon
CmaCh17G013850.1.exon.1	CmaCh17G013850.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 1..42 score: 3.7
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 2..44 score: 8.6
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 3..34 score: 6.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 3..16 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 1..114 score: 4.1
None	No IPR available	PANTHER	PTHR23177:SF8	CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATED	coord: 1..114 score: 4.1