Cp4.1LG17g09430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g09430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionROP-interactive CRIB motif protein
LocationCp4.1LG17 : 7311711 .. 7312701 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGAGGTCAAATTGTATAAATACAAGGAGAATAAGGGAGCTGCATCGATCCTACAGCTTTGATTGGAATAAGAACAAAGACTATAATCAATTTTTTAGTGGTAATTATTTGTATGATTAGTATTATTAATTTGGGTTGGTGATAAGGACATAAAATATCATTGTTTAAGGAAGTTATAGTTTAAAATATTGGCCCTTCTTCTGCTTCCTTCCTCTTGTCTATTCTCATGAAAAAAGAAGAGAACCCTAATGCCAAACAAATATTCATACTTGCGATTTCTGGGTTTGCAGGCAATGAGAAACAAGCTGAATTGCAAATAGGGTATCCTACAGATGTAAGGCATGTTGCCCATATTGGTTGGGATGGTCCTTCTGTCACTCCTCCCAGCTGGGTAAGATGCTACTTCTCAATTCTTCCACCTATCCAATCGTATAAAACTGTTAGTAAAATAATTGTGGGAGTAAATGGGTTCCCAGATGAATGAATTTAAAAAGGCACCATCTTGCGGAACCTACTCTAAAAGAATTTTCTTTGATTTGAATGATGGTTCTTATAAAGATTTGGTGGGCGTATTTTTATTAGTTAACCAAAACTGTGTCTAATTGAGTGATTCATAAGTTTTTTAGATCGTCGTCAAAGAGGAGATAAAGGTTCAAACTCAGCAGCCCGGAGTACGGCGGACTTAGCTAAACCATCAAGACACCCGTCGTCAATCGAGTCTCCAACGGCCAGAGAAAGGTCGGAGAGACACAAAGCAAGGCGGTCTTCAAAGGCGAAGGACTCCTCCGATGAAAAAGAAAGCAACAACGAGTCACCCACCTTAAGCATACCGGAGATCCCAAGGACCGGGCGGCGGAAGAAAACAAGCAGAACCAAAACCCAGGTTGCAGGAACACACGAGTCCGCATTTTCCGATCCTGGGGCGGTATCGGCAACGGGATCCATATCAATATCGGAGGACACGGGTCTGTGTCAGACACCTTAA

mRNA sequence

ATGGGCAATGAGAAACAAGCTGAATTGCAAATAGGGTATCCTACAGATGTAAGGCATGTTGCCCATATTGGTTGGGATGGTCCTTCTGTCACTCCTCCCAGCTGGGTAAGATGCTACTTCTCAATTCTTCCACCTATCCAATCGTATAAAACTGTTAATCGTCGTCAAAGAGGAGATAAAGGTTCAAACTCAGCAGCCCGGAGTACGGCGGACTTAGCTAAACCATCAAGACACCCGTCGTCAATCGAGTCTCCAACGGCCAGAGAAAGGTCGGAGAGACACAAAGCAAGGCGGTCTTCAAAGGCGAAGGACTCCTCCGATGAAAAAGAAAGCAACAACGAGTCACCCACCTTAAGCATACCGGAGATCCCAAGGACCGGGCGGCGGAAGAAAACAAGCAGAACCAAAACCCAGGTTGCAGGAACACACGAGTCCGCATTTTCCGATCCTGGGGCGGTATCGGCAACGGGATCCATATCAATATCGGAGGACACGGGTCTGTGTCAGACACCTTAA

Coding sequence (CDS)

ATGGGCAATGAGAAACAAGCTGAATTGCAAATAGGGTATCCTACAGATGTAAGGCATGTTGCCCATATTGGTTGGGATGGTCCTTCTGTCACTCCTCCCAGCTGGGTAAGATGCTACTTCTCAATTCTTCCACCTATCCAATCGTATAAAACTGTTAATCGTCGTCAAAGAGGAGATAAAGGTTCAAACTCAGCAGCCCGGAGTACGGCGGACTTAGCTAAACCATCAAGACACCCGTCGTCAATCGAGTCTCCAACGGCCAGAGAAAGGTCGGAGAGACACAAAGCAAGGCGGTCTTCAAAGGCGAAGGACTCCTCCGATGAAAAAGAAAGCAACAACGAGTCACCCACCTTAAGCATACCGGAGATCCCAAGGACCGGGCGGCGGAAGAAAACAAGCAGAACCAAAACCCAGGTTGCAGGAACACACGAGTCCGCATTTTCCGATCCTGGGGCGGTATCGGCAACGGGATCCATATCAATATCGGAGGACACGGGTCTGTGTCAGACACCTTAA

Protein sequence

MGNEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGDKGSNSAARSTADLAKPSRHPSSIESPTARERSERHKARRSSKAKDSSDEKESNNESPTLSIPEIPRTGRRKKTSRTKTQVAGTHESAFSDPGAVSATGSISISEDTGLCQTP
Homology
[Close]
BLAST of Cp4.1LG17g09430 vs. Swiss-Prot
Match: RIC6_ARATH (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPS--VTPPSWVRCYFSILPPIQSYKTVNRRQRGDK 62
           +EK+ E+QIG PTDV+HVAHIGWDGPS   T PSW+   F+     +S + V       K
Sbjct: 26  SEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWM-TEFNSGGGFESAEGVGEDDSSIK 85

Query: 63  GSN---SAARSTADLAKPSRHPSSIE-SPTARERSERHKARRSSKAKDSSDE--KESNNE 122
             +     +R   +L K +R  +S + SPT  + S++ K R S+K   SS    KE+  E
Sbjct: 86  CMSEYGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPKEATEE 145

Query: 123 SPTLS-----IPEIPRTGRRKKTSRTKTQVAG 142
              LS     +PEIP+  RRKK S  +T V G
Sbjct: 146 QDELSSWPSGLPEIPKKSRRKKKSTKETAVNG 176

[Close]
BLAST of Cp4.1LG17g09430 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 61/175 (34.86%), Postives = 88/175 (50.29%), Query Frame = 1 

Query: 4   EKQAELQIGYPTDVRHVAHIGWDGPS--VTPPSWVRCYFS--ILPPIQSYKTVNRRQRGD 63
           EK+ E+QIG PTDV+HVAHIGWDGPS   T PSW+  + S  ++  IQ     +   +  
Sbjct: 29  EKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQGLGEDDSSVKCQ 88

Query: 64  KGSNSAARSTADLAKPSRHPSSIESPTARERSERHKARRSSK-------AKD----SSDE 123
                  R    L K +R  SS +    +ERS++ K R S+K        KD    SS  
Sbjct: 89  SEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTKDEDSTSSSR 148

Query: 124 KESNNESPTLS-----IPEIPRTGRRKKTSRTKTQVAGTHESAFSDPGAVSATGS 159
           + + +E  +LS     +PE+P+  +RKK S+       +  S  S+   +S TGS
Sbjct: 149 RTTKDEDSSLSQHSAGLPEVPKKSKRKK-SKEAGNGGSSRSSRISEADYMSDTGS 202

[Close]
BLAST of Cp4.1LG17g09430 vs. Swiss-Prot
Match: RIC5_ARATH (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGDKGS 62
           +EK+ E+QIG PTDV+HVAHIGW+GPS T PSW+  +     P    KT  +     K  
Sbjct: 21  DEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDF----KPTDQTKTETKGTSNKKPG 80

Query: 63  NSAARSTADLAKPSR-HPSSIESPTARERSERHKARRSSKAKDSSDEKESNNESPTLSIP 122
           +S  +      K S  + S  ESP+    S R   R + K ++ +    S + S  L +P
Sbjct: 81  SSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGSGSESGS-GLELP 140

Query: 123 E------IPRTGRRKKTSRTKT 138
           +      +P+  ++KK+  + T
Sbjct: 141 QQTDQFVVPKQSKQKKSKGSAT 157

[Close]
BLAST of Cp4.1LG17g09430 vs. Swiss-Prot
Match: RIC8_ARATH (CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana GN=RIC8 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSV--TPPSWVRCYFSILPPIQSYKTVNRRQRGD- 62
           NEK+AE+QIG PTDV+HVAHIGWDG SV   PPSW++  F +L         N ++    
Sbjct: 9   NEKEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMK-DFKVLGGYSPALIGNIKEDASC 68

Query: 63  -KGSNSAARSTADLAKPSRHPSSI--ESPTARERSERHKARRSSKAKDSSDEKESNNESP 122
               ++ +R    L K SR  SS    SPT +ERS     RR S   + + +    +   
Sbjct: 69  IFEDSTRSRDIPRLPKSSRERSSTLGGSPT-KERSR----RRGSSQYNGNPKVSRRSSKE 128

Query: 123 TLSIPE---IPRTGRRKKTS--------RTKTQVAGTHESAFSDPGAVSATGSIS 161
           + +IP+     +  RRKK+         R+  +V G+   + SD  + S  G ++
Sbjct: 129 SSAIPQDGGFNKKSRRKKSKDCVDGGSRRSSRRVRGSQVESISDSSSTSDAGYLT 177

[Close]
BLAST of Cp4.1LG17g09430 vs. Swiss-Prot
Match: RIC9_ARATH (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 1 

Query: 4  EKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWV 37
          E++ E++IGYPTDVRHV+HIGWD  S + PSW+
Sbjct: 23 EEEEEMEIGYPTDVRHVSHIGWDSSSSSAPSWL 55

[Close]
BLAST of Cp4.1LG17g09430 vs. TrEMBL
Match: A0A0A0KF43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.1e-33
Identity = 97/194 (50.00%), Postives = 128/194 (65.98%), Query Frame = 1 

Query: 9   LQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGD--------- 68
           ++IG+PTDV+HVAHIGWDGPSV  PSW+  + +  PP  S   ++    GD         
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKA--PPSFSSAPLSLHASGDNKEDVSVKW 60

Query: 69  -----------KGSNSAARS-TADLAKPSRHP-------SSIESPTARER-SERHKARRS 128
                      KGS+S+A++ TAD+ K S+HP       SS ESPT RER SER K RRS
Sbjct: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120

Query: 129 SKAKD-SSDEKESNNESPTLSIPEIPRTGRRKKTSRTKTQVA-GTHESAFSDPGAVSATG 172
           SK+K+ SS +  +NN SPTLS+P++PR  RRKKT+RTK  +A  T++S  SDPG+ +ATG
Sbjct: 121 SKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATG 180

[Close]
BLAST of Cp4.1LG17g09430 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18
Identity = 78/193 (40.41%), Postives = 107/193 (55.44%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCY----FSILPPIQSYKTVNRRQRG 62
           NEK+ E+QIG+PTDV+HVAHIGWDGPSV  PSW+  +       +    S + V++  + 
Sbjct: 22  NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKHPNNGDIKQDASAQCVSQDSKR 81

Query: 63  DKGSNSAARSTADLAKPSRHPSS------IESPTARERSERHKARRSSKAKDSS------ 122
           D    S  R   +L K S+  SS       ESPT R++SE+ K+++SSKA++SS      
Sbjct: 82  DMAVTS--RDMPELPKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESSSSDNIG 141

Query: 123 -----DEKESNNESPTLSIPEIPRTGRRKKT-------SRTKTQVAGTHESAFSDPGAVS 168
                 +    +ESPT S+P +P+ GRRKK+       SR+K   A T  S FS+    S
Sbjct: 142 PSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETCSSQFSN--NAS 201

[Close]
BLAST of Cp4.1LG17g09430 vs. TrEMBL
Match: B9SV18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-15
Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCY------FSILP--------PIQS 62
           NEK+ E+QIGYPTDV+HVAHIGWDGPSVT PSW+  +      FS  P           S
Sbjct: 43  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLNSNGEPKEDNS 102

Query: 63  YKTVNRRQRGDKGSNSAA--RSTADLAKPSRHPSSI-----ESPTARERSERHKARRSSK 122
              V+      +GS S    R   +L K SR PSS      ESPT  +  +  ++R+SS+
Sbjct: 103 ITWVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSR 162

Query: 123 --AKDSSD------EKESNNESPTLS-IPEIPRTGRRKKTSRTKTQVAGTHESAFSDPGA 171
              KD +D       K+ +  S +LS +P+IP+  RRKK+       A   ++   D   
Sbjct: 163 NATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADC 222

[Close]
BLAST of Cp4.1LG17g09430 vs. TrEMBL
Match: A0A067FAC2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028259mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGDKGS 62
           NEK+ E+QIG+PTDV+HVAHIGWDGPSV  PSW+   F         K     +  D  S
Sbjct: 22  NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN-EFKASELGGDIKDDASIKSEDSSS 81

Query: 63  NSAARSTADLAKPSRHPSSIESPTARERSERHKARRSSKAKDSSDEKESNNESPTLSIPE 122
             +AR   +L K SR  +S  S    ERSE+ ++RRS ++     E   +  +      +
Sbjct: 82  RRSARD-PELPKSSRRHASTGSSADPERSEKSRSRRSKQSNKDLSESTRSKGASEGGGTD 141

Query: 123 IPRTGRRKK----------TSRTKTQVAGTHESAFSDPGAVSATGSIS 161
           IP+  RRKK          +SRT  +   +     S+ G+VS + +I+
Sbjct: 142 IPKKSRRKKSKDSADGSSRSSRTSRRGQSSKSDTASECGSVSKSNNIN 187

[Close]
BLAST of Cp4.1LG17g09430 vs. TrEMBL
Match: V4U4D6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023759mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11
Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGDKGS 62
           NEK+ E+QIG+PTDV+HVAHIGWDGPSV  PSW+   F         K     +  D  S
Sbjct: 22  NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN-EFKASELGGDIKDDASIKSEDSSS 81

Query: 63  NSAARSTADLAKPSRHPSSIESPTARERSERHKARRSSKAKDSSDEKESNNESPTLSIPE 122
             +AR   +L K SR  +S  S    ERSE+ ++RRS ++     E   +  +      +
Sbjct: 82  RRSARD-PELPKSSRRHASTGSSADPERSEKSRSRRSKQSNKDLSESTRSKGASEGGGTD 141

Query: 123 IPRTGRRKK----------TSRTKTQVAGTHESAFSDPGAVSATGSIS 161
           IP+  RRKK          +SRT  +   +     S+ G+VS + +I+
Sbjct: 142 IPKKSRRKKSKDSADGSSRSSRTSRRGQSSKSDTASECGSVSKSNNIN 187

[Close]
BLAST of Cp4.1LG17g09430 vs. TAIR10
Match: AT2G20430.1 (AT2G20430.1 ROP-interactive CRIB motif-containing protein 6)

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-13
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPS--VTPPSWVRCYFSILPPIQSYKTVNRRQRGDK 62
           +EK+ E+QIG PTDV+HVAHIGWDGPS   T PSW+   F+     +S + V       K
Sbjct: 26  SEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWM-TEFNSGGGFESAEGVGEDDSSIK 85

Query: 63  GSN---SAARSTADLAKPSRHPSSIE-SPTARERSERHKARRSSKAKDSSDE--KESNNE 122
             +     +R   +L K +R  +S + SPT  + S++ K R S+K   SS    KE+  E
Sbjct: 86  CMSEYGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTKRRSSNKGTSSSSRRPKEATEE 145

Query: 123 SPTLS-----IPEIPRTGRRKKTSRTKTQVAG 142
              LS     +PEIP+  RRKK S  +T V G
Sbjct: 146 QDELSSWPSGLPEIPKKSRRKKKSTKETAVNG 176

[Close]
BLAST of Cp4.1LG17g09430 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.8e-13
Identity = 61/175 (34.86%), Postives = 88/175 (50.29%), Query Frame = 1 

Query: 4   EKQAELQIGYPTDVRHVAHIGWDGPS--VTPPSWVRCYFS--ILPPIQSYKTVNRRQRGD 63
           EK+ E+QIG PTDV+HVAHIGWDGPS   T PSW+  + S  ++  IQ     +   +  
Sbjct: 29  EKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMESIQGLGEDDSSVKCQ 88

Query: 64  KGSNSAARSTADLAKPSRHPSSIESPTARERSERHKARRSSK-------AKD----SSDE 123
                  R    L K +R  SS +    +ERS++ K R S+K        KD    SS  
Sbjct: 89  SEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTSSSRRTKDEDSTSSSR 148

Query: 124 KESNNESPTLS-----IPEIPRTGRRKKTSRTKTQVAGTHESAFSDPGAVSATGS 159
           + + +E  +LS     +PE+P+  +RKK S+       +  S  S+   +S TGS
Sbjct: 149 RTTKDEDSSLSQHSAGLPEVPKKSKRKK-SKEAGNGGSSRSSRISEADYMSDTGS 202

[Close]
BLAST of Cp4.1LG17g09430 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGDKGS 62
           +EK+ E+QIG PTDV+HVAHIGW+GPS T PSW+  +     P    KT  +     K  
Sbjct: 21  DEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDF----KPTDQTKTETKGTSNKKPG 80

Query: 63  NSAARSTADLAKPSR-HPSSIESPTARERSERHKARRSSKAKDSSDEKESNNESPTLSIP 122
           +S  +      K S  + S  ESP+    S R   R + K ++ +    S + S  L +P
Sbjct: 81  SSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGSGSESGS-GLELP 140

Query: 123 E------IPRTGRRKKTSRTKT 138
           +      +P+  ++KK+  + T
Sbjct: 141 QQTDQFVVPKQSKQKKSKGSAT 157

[Close]
BLAST of Cp4.1LG17g09430 vs. TAIR10
Match: AT1G03982.1 (AT1G03982.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.8e-09
Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSV--TPPSWVRCYFSILPPIQSYKTVNRRQRGD- 62
           NEK+AE+QIG PTDV+HVAHIGWDG SV   PPSW++  F +L         N ++    
Sbjct: 9   NEKEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMK-DFKVLGGYSPALIGNIKEDASC 68

Query: 63  -KGSNSAARSTADLAKPSRHPSSI--ESPTARERSERHKARRSSKAKDSSDEKESNNESP 122
               ++ +R    L K SR  SS    SPT +ERS     RR S   + + +    +   
Sbjct: 69  IFEDSTRSRDIPRLPKSSRERSSTLGGSPT-KERSR----RRGSSQYNGNPKVSRRSSKE 128

Query: 123 TLSIPE---IPRTGRRKKTS--------RTKTQVAGTHESAFSDPGAVSATGSIS 161
           + +IP+     +  RRKK+         R+  +V G+   + SD  + S  G ++
Sbjct: 129 SSAIPQDGGFNKKSRRKKSKDCVDGGSRRSSRRVRGSQVESISDSSSTSDAGYLT 177

[Close]
BLAST of Cp4.1LG17g09430 vs. TAIR10
Match: AT1G61795.1 (AT1G61795.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-08
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 1 

Query: 4  EKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWV 37
          E++ E++IGYPTDVRHV+HIGWD  S + PSW+
Sbjct: 23 EEEEEMEIGYPTDVRHVSHIGWDSSSSSAPSWL 55

[Close]
BLAST of Cp4.1LG17g09430 vs. NCBI nr
Match: gi|700191182|gb|KGN46386.1| (hypothetical protein Csa_6G088140 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 7.2e-33
Identity = 97/194 (50.00%), Postives = 128/194 (65.98%), Query Frame = 1 

Query: 9   LQIGYPTDVRHVAHIGWDGPSVTPPSWVRCYFSILPPIQSYKTVNRRQRGD--------- 68
           ++IG+PTDV+HVAHIGWDGPSV  PSW+  + +  PP  S   ++    GD         
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKA--PPSFSSAPLSLHASGDNKEDVSVKW 60

Query: 69  -----------KGSNSAARS-TADLAKPSRHP-------SSIESPTARER-SERHKARRS 128
                      KGS+S+A++ TAD+ K S+HP       SS ESPT RER SER K RRS
Sbjct: 61  VSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRS 120

Query: 129 SKAKD-SSDEKESNNESPTLSIPEIPRTGRRKKTSRTKTQVA-GTHESAFSDPGAVSATG 172
           SK+K+ SS +  +NN SPTLS+P++PR  RRKKT+RTK  +A  T++S  SDPG+ +ATG
Sbjct: 121 SKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATG 180

[Close]
BLAST of Cp4.1LG17g09430 vs. NCBI nr
Match: gi|659120438|ref|XP_008460194.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-30
Identity = 101/196 (51.53%), Postives = 129/196 (65.82%), Query Frame = 1 

Query: 9   LQIGYPTDVRHVAHIGWDGPSVTPPSWVRCY-----FSILP-----PIQSYKTVN----- 68
           +QIGYPTDV+HVAHIGWDGPSV  PSW+  +     FS  P     P  + + V+     
Sbjct: 1   MQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLPAPGDNKEDVSVKGVS 60

Query: 69  --RRQRGDKG--SNSAARSTAD--LAKPSRHPSS-------IESPTARERS-ERHKARRS 128
             R +R +KG  S+SA   TAD  + K S+HPSS        +SPT RERS ER K RRS
Sbjct: 61  EDRSRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRERSSERQKTRRS 120

Query: 129 SKAKDSSDEKESNNE-SPTLSIPEIPRTG-RRKKTSRTKTQVA-GTHESAFSDPGA-VSA 172
           SK+K+SS   ++NN  SPTLS+P++PR   RRKKT+RTK  +A  T++S +SDPGA  +A
Sbjct: 121 SKSKESSSSSDNNNNHSPTLSLPDVPRQNPRRKKTTRTKPHLAPETYKSPYSDPGASTTA 180

[Close]
BLAST of Cp4.1LG17g09430 vs. NCBI nr
Match: gi|778680973|ref|XP_011651433.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-18
Identity = 78/193 (40.41%), Postives = 107/193 (55.44%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCY----FSILPPIQSYKTVNRRQRG 62
           NEK+ E+QIG+PTDV+HVAHIGWDGPSV  PSW+  +       +    S + V++  + 
Sbjct: 22  NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKHPNNGDIKQDASAQCVSQDSKR 81

Query: 63  DKGSNSAARSTADLAKPSRHPSS------IESPTARERSERHKARRSSKAKDSS------ 122
           D    S  R   +L K S+  SS       ESPT R++SE+ K+++SSKA++SS      
Sbjct: 82  DMAVTS--RDMPELPKSSKRQSSTVGGSVAESPTMRDKSEKVKSKKSSKARESSSSDNIG 141

Query: 123 -----DEKESNNESPTLSIPEIPRTGRRKKT-------SRTKTQVAGTHESAFSDPGAVS 168
                 +    +ESPT S+P +P+ GRRKK+       SR+K   A T  S FS+    S
Sbjct: 142 PSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKATAAETCSSQFSN--NAS 201

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BLAST of Cp4.1LG17g09430 vs. NCBI nr
Match: gi|223530665|gb|EEF32538.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 89.7 bits (221), Expect = 5.2e-15
Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCY------FSILP--------PIQS 62
           NEK+ E+QIGYPTDV+HVAHIGWDGPSVT PSW+  +      FS  P           S
Sbjct: 43  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLNSNGEPKEDNS 102

Query: 63  YKTVNRRQRGDKGSNSAA--RSTADLAKPSRHPSSI-----ESPTARERSERHKARRSSK 122
              V+      +GS S    R   +L K SR PSS      ESPT  +  +  ++R+SS+
Sbjct: 103 ITWVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSR 162

Query: 123 --AKDSSD------EKESNNESPTLS-IPEIPRTGRRKKTSRTKTQVAGTHESAFSDPGA 171
              KD +D       K+ +  S +LS +P+IP+  RRKK+       A   ++   D   
Sbjct: 163 NATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADC 222

[Close]
BLAST of Cp4.1LG17g09430 vs. NCBI nr
Match: gi|1000945521|ref|XP_015581245.1| (PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis])

HSP 1 Score: 89.7 bits (221), Expect = 5.2e-15
Identity = 76/198 (38.38%), Postives = 103/198 (52.02%), Query Frame = 1 

Query: 3   NEKQAELQIGYPTDVRHVAHIGWDGPSVTPPSWVRCY------FSILP--------PIQS 62
           NEK+ E+QIGYPTDV+HVAHIGWDGPSVT PSW+  +      FS  P           S
Sbjct: 22  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAPLNSNGEPKEDNS 81

Query: 63  YKTVNRRQRGDKGSNSAA--RSTADLAKPSRHPSSI-----ESPTARERSERHKARRSSK 122
              V+      +GS S    R   +L K SR PSS      ESPT  +  +  ++R+SS+
Sbjct: 82  ITWVSEDSSSRRGSRSRGIDRDLPELPKASRKPSSTERLDGESPTREKTDKPKQSRKSSR 141

Query: 123 --AKDSSD------EKESNNESPTLS-IPEIPRTGRRKKTSRTKTQVAGTHESAFSDPGA 171
              KD +D       K+ +  S +LS +P+IP+  RRKK+       A   ++   D   
Sbjct: 142 NATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRAKAQALDADC 201

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g09430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIC6_ARATH5.4e-1240.13CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1[more]
RIC7_ARATH1.6e-1134.86CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1[more]
RIC5_ARATH2.8e-0833.10CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1[more]
RIC8_ARATH1.4e-0733.71CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana GN=RIC8 PE=2 SV=1[more]
RIC9_ARATH2.3e-0763.64CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana GN=RIC9 PE=1 SV=1[more]
BLAST of Cp4.1LG17g09430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF43_CUCSA5.1e-3350.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1[more]
A0A0A0L7D1_CUCSA2.1e-1840.41Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1[more]
B9SV18_RICCO3.6e-1538.38Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1[more]
A0A067FAC2_CITSI4.2e-1135.71Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028259mg PE=4 SV=1[more]
V4U4D6_9ROSI4.2e-1135.71Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023759mg PE=4 SV=1[more]
BLAST of Cp4.1LG17g09430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20430.13.0e-1340.13 ROP-interactive CRIB motif-containing protein 6[more]
AT4G28556.18.8e-1334.86 PAK-box/P21-Rho-binding family protein[more]
AT3G23380.11.6e-0933.10 ROP-interactive CRIB motif-containing protein 5[more]
AT1G03982.17.8e-0933.71 PAK-box/P21-Rho-binding family protein[more]
AT1G61795.11.3e-0863.64 PAK-box/P21-Rho-binding family protein[more]
BLAST of Cp4.1LG17g09430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191182|gb|KGN46386.1|7.2e-3350.00hypothetical protein Csa_6G088140 [Cucumis sativus][more]
gi|659120438|ref|XP_008460194.1|5.7e-3051.53PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo][more]
gi|778680973|ref|XP_011651433.1|3.0e-1840.41PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis sativus][more]
gi|223530665|gb|EEF32538.1|5.2e-1538.38conserved hypothetical protein [Ricinus communis][more]
gi|1000945521|ref|XP_015581245.1|5.2e-1538.38PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000095CRIB_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009860 pollen tube growth
cellular_component GO:0005575 cellular_component
cellular_component GO:0016324 apical plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g09430.1Cp4.1LG17g09430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000095CRIB domainGENE3DG3DSA:3.90.810.10coord: 4..37
score: 4.7
IPR000095CRIB domainPFAMPF00786PBDcoord: 10..37
score: 1.
IPR000095CRIB domainSMARTSM00285PBD_5coord: 11..42
score: 0.
IPR000095CRIB domainPROFILEPS50108CRIBcoord: 11..24
score: 8
NoneNo IPR availablePANTHERPTHR23177MKIAA1688 PROTEINcoord: 87..135
score: 2.1E-16coord: 3..44
score: 2.1
NoneNo IPR availablePANTHERPTHR23177:SF8CRIB DOMAIN-CONTAINING PROTEIN RIC1-RELATEDcoord: 3..44
score: 2.1E-16coord: 87..135
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g09430Cucsa.349000Cucumber (Gy14) v1cgycpeB0911
Cp4.1LG17g09430CmaCh17G013850Cucurbita maxima (Rimu)cmacpeB389
Cp4.1LG17g09430CmoCh17G013380Cucurbita moschata (Rifu)cmocpeB352
Cp4.1LG17g09430MELO3C022379Melon (DHL92) v3.5.1cpemeB284
Cp4.1LG17g09430ClCG06G001550Watermelon (Charleston Gray)cpewcgB298
Cp4.1LG17g09430ClCG07G001190Watermelon (Charleston Gray)cpewcgB307
Cp4.1LG17g09430MELO3C022379.2Melon (DHL92) v3.6.1cpemedB332
Cp4.1LG17g09430CsaV3_6G007520Cucumber (Chinese Long) v3cpecucB0403
Cp4.1LG17g09430Bhi05G000138Wax gourdcpewgoB0406
Cp4.1LG17g09430CsGy6G007130Cucumber (Gy14) v2cgybcpeB783
Cp4.1LG17g09430Carg03793Silver-seed gourdcarcpeB1359
Cp4.1LG17g09430Carg11549Silver-seed gourdcarcpeB0022
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g09430Cp4.1LG12g10050Cucurbita pepo (Zucchini)cpecpeB170
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g09430Wax gourdcpewgoB0389
Cp4.1LG17g09430Cucurbita maxima (Rimu)cmacpeB914
Cp4.1LG17g09430Cucurbita moschata (Rifu)cmocpeB851
Cp4.1LG17g09430Wild cucumber (PI 183967)cpecpiB323
Cp4.1LG17g09430Cucumber (Chinese Long) v2cpecuB322
Cp4.1LG17g09430Bottle gourd (USVL1VR-Ls)cpelsiB249
Cp4.1LG17g09430Watermelon (97103) v1cpewmB341
Cp4.1LG17g09430Melon (DHL92) v3.6.1cpemedB352